CircRNA Information

General Information
circRNA Basic Information
CircID chr2:98555968|98556246
Strand +
CircType exon
Host Gene ENSG00000040933.14;
Algorism CIRI2;
Sequence CTGCCAATATCTCTCATCCAGCTGTGTCCCTGAACAATTCCCCTTTCCCCTTTCATTCTACCAATTCCTAATGCCATAGACAATCACATCAGAAAGGCATCTGCATCCTGGCCTCCTTCAGGTTCTCAGATTGCTTTACAAACCTGAAAAGCCCAGGAGCCCAACCCTTATAGCCATGGTGGTGTATCTCAAGAGGACCCTGAGATTCTGACTGGCAGAGATGCAGAATCACACATGGGCTCCAGTTACATGGAAAGGCAACCGGAGACTCCGCTCTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:98555968|98556246 hsa-miR-183-5p 0 0 1
chr2:98555968|98556246 hsa-miR-183-3p 0 0 1
chr2:98555968|98556246 hsa-miR-216a-5p 0 0 1
chr2:98555968|98556246 hsa-miR-216a-3p 0 0 1
chr2:98555968|98556246 hsa-miR-146a-5p 0 0 1
chr2:98555968|98556246 hsa-miR-146a-3p 0 0 1
chr2:98555968|98556246 hsa-miR-379-5p 0 0 1
chr2:98555968|98556246 hsa-miR-379-3p 0 0 1
chr2:98555968|98556246 hsa-miR-488-5p 0 0 1
chr2:98555968|98556246 hsa-miR-488-3p 0 0 1
chr2:98555968|98556246 hsa-miR-526b-5p 0 0 1
chr2:98555968|98556246 hsa-miR-526b-3p 0 0 1
chr2:98555968|98556246 hsa-miR-587 0 0 1
chr2:98555968|98556246 hsa-miR-589-5p 0 0 1
chr2:98555968|98556246 hsa-miR-589-3p 0 0 1
chr2:98555968|98556246 hsa-miR-1287-5p 0 0 1
chr2:98555968|98556246 hsa-miR-1287-3p 0 0 1
chr2:98555968|98556246 hsa-miR-1255a 0 0 1
chr2:98555968|98556246 hsa-miR-1256 0 0 1
chr2:98555968|98556246 hsa-miR-1266-5p 0 0 1
chr2:98555968|98556246 hsa-miR-1266-3p 0 0 1
chr2:98555968|98556246 hsa-miR-1252-5p 0 0 1
chr2:98555968|98556246 hsa-miR-1252-3p 0 0 1
chr2:98555968|98556246 hsa-miR-296-3p 1 1 1
chr2:98555968|98556246 hsa-miR-532-5p 0 0 1
chr2:98555968|98556246 hsa-miR-671-3p 0 0 1
chr2:98555968|98556246 hsa-miR-1207-3p 0 0 1
chr2:98555968|98556246 hsa-miR-146b-5p 0 0 1
chr2:98555968|98556246 hsa-miR-582-3p 0 0 1
chr2:98555968|98556246 hsa-miR-508-3p 0 0 1
chr2:98555968|98556246 hsa-miR-220b 0 0 1
chr2:98555968|98556246 hsa-miR-1255b 0 0 1
chr2:98555968|98556246 hsa-miR-219-2-3p 0 0 1
chr2:98555968|98556246 hsa-miR-544 0 0 1
chr2:98555968|98556246 hsa-miR-219-5p 0 0 1
chr2:98555968|98556246 hsa-miR-544a 0 1 0
chr2:98555968|98556246 hsa-miR-612 1 0 0
chr2:98555968|98556246 hsa-miR-762 1 0 0
chr2:98555968|98556246 hsa-miR-920 1 0 0
chr2:98555968|98556246 hsa-miR-2110 1 0 0
chr2:98555968|98556246 hsa-miR-711 1 0 0
chr2:98555968|98556246 hsa-miR-3153 1 1 0
chr2:98555968|98556246 hsa-miR-3154 1 0 0
chr2:98555968|98556246 hsa-miR-3175 1 0 0
chr2:98555968|98556246 hsa-miR-4270 1 0 0
chr2:98555968|98556246 hsa-miR-4429 1 0 0
chr2:98555968|98556246 hsa-miR-4430 1 0 0
chr2:98555968|98556246 hsa-miR-4437 1 0 0
chr2:98555968|98556246 hsa-miR-3135b 1 0 0
chr2:98555968|98556246 hsa-miR-4462 1 0 0
chr2:98555968|98556246 hsa-miR-4497 1 0 0
chr2:98555968|98556246 hsa-miR-4507 1 0 0
chr2:98555968|98556246 hsa-miR-4516 1 0 0
chr2:98555968|98556246 hsa-miR-4518 1 1 0
chr2:98555968|98556246 hsa-miR-4525 1 0 0
chr2:98555968|98556246 hsa-miR-4533 1 0 0
chr2:98555968|98556246 hsa-miR-1587 1 0 0
chr2:98555968|98556246 hsa-miR-4641 0 1 0
chr2:98555968|98556246 hsa-miR-4672 1 1 0
chr2:98555968|98556246 hsa-miR-4688 1 0 0
chr2:98555968|98556246 hsa-miR-4739 1 0 0
chr2:98555968|98556246 hsa-miR-5087 0 1 0
chr2:98555968|98556246 hsa-miR-5186 1 0 0
chr2:98555968|98556246 hsa-miR-8052 1 0 0
chr2:98555968|98556246 hsa-miR-8085 1 0 0
chr2:98555968|98556246 hsa-miR-12118 0 1 0
chr2:98555968|98556246 hsa-miR-12128 1 1 0
chr2:98555968|98556246 hsa-miR-211-3p 1 1 0
chr2:98555968|98556246 hsa-miR-4433b-3p 1 0 0
chr2:98555968|98556246 hsa-miR-6734-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6825-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6857-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6799-5p 1 0 0
chr2:98555968|98556246 hsa-miR-8071 1 0 0
chr2:98555968|98556246 hsa-miR-1236-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6089 1 0 0
chr2:98555968|98556246 hsa-miR-6730-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6721-5p 1 0 0
chr2:98555968|98556246 hsa-miR-197-5p 1 0 0
chr2:98555968|98556246 hsa-miR-5589-5p 1 0 0
chr2:98555968|98556246 hsa-miR-7845-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6716-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6871-5p 1 0 0
chr2:98555968|98556246 hsa-miR-1292-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6793-5p 1 0 0
chr2:98555968|98556246 hsa-miR-23a-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6798-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6760-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6881-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6782-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6852-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4640-5p 1 1 0
chr2:98555968|98556246 hsa-miR-3127-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4650-3p 1 0 0
chr2:98555968|98556246 hsa-miR-767-5p 1 0 0
chr2:98555968|98556246 hsa-miR-92b-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4713-3p 1 0 0
chr2:98555968|98556246 hsa-miR-4743-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3162-5p 1 0 0
chr2:98555968|98556246 hsa-miR-5010-5p 1 0 0
chr2:98555968|98556246 hsa-miR-490-3p 0 1 0
chr2:98555968|98556246 hsa-miR-7856-5p 1 0 0
chr2:98555968|98556246 hsa-miR-1289 1 1 0
chr2:98555968|98556246 hsa-miR-4423-5p 1 1 0
chr2:98555968|98556246 hsa-miR-4763-3p 1 0 0
chr2:98555968|98556246 hsa-miR-5001-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6743-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6754-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6756-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6851-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6763-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3620-5p 1 0 0
chr2:98555968|98556246 hsa-miR-5196-5p 1 0 0
chr2:98555968|98556246 hsa-miR-642b-3p 1 0 0
chr2:98555968|98556246 hsa-miR-6780b-5p 1 0 0
chr2:98555968|98556246 hsa-miR-10526-3p 1 0 0
chr2:98555968|98556246 hsa-miR-1909-3p 1 0 0
chr2:98555968|98556246 hsa-miR-4649-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4685-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4725-3p 1 0 0
chr2:98555968|98556246 hsa-miR-4745-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4749-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6729-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6735-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6738-5p 1 0 0
chr2:98555968|98556246 hsa-miR-675-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6777-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6794-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6889-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3187-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6831-5p 0 1 0
chr2:98555968|98556246 hsa-miR-939-5p 1 0 0
chr2:98555968|98556246 hsa-miR-4769-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3085-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3940-5p 1 0 0
chr2:98555968|98556246 hsa-miR-30c-1-3p 1 0 0
chr2:98555968|98556246 hsa-miR-6731-5p 1 0 0
chr2:98555968|98556246 hsa-miR-6758-5p 1 0 0
chr2:98555968|98556246 hsa-miR-3173-3p 0 1 0
chr2:98555968|98556246 hsa-miR-6891-5p 0 1 0
chr2:98555968|98556246 hsa-miR-4716-3p 1 0 0
chr2:98555968|98556246 hsa-miR-6750-5p 0 1 0
chr2:98555968|98556246 hsa-miR-3529-5p 1 0 0
chr2:98555968|98556246 hsa-miR-10400-3p 1 1 0
chr2:98555968|98556246 hsa-miR-320a-3p 1 0 0
chr2:98555968|98556246 hsa-miR-320b 1 0 0
chr2:98555968|98556246 hsa-miR-320c 1 0 0
chr2:98555968|98556246 hsa-miR-6783-3p 0 1 0
chr2:98555968|98556246 hsa-miR-323b-5p 1 0 0
chr2:98555968|98556246 hsa-miR-642a-3p 1 0 0
chr2:98555968|98556246 hsa-miR-320d 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:98555968|98556246
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MHPGLLQVLRLLYKPEKPRSPTLIAMVVYLKRTLRF
Nucleotide Sequence CTGCATCCTGGCCTCCTTCAGGTTCTCAGATTGCTTTACAAACCTGAAAAGCCCAGGAGCCCAACCCTTATAGCCATGGTGGTGTATCTCAAGAGGACCCTGAGATTCTGA

CircID chr2:98555968|98556246
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MSMALGIGRMKGERGIVQGHSWMRDIG
Nucleotide Sequence TTGTCTATGGCATTAGGAATTGGTAGAATGAAAGGGGAAAGGGGAATTGTTCAGGGACACAGCTGGATGAGAGATATTGGC

CircID chr2:98555968|98556246
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MHLCQSESQGPLEIHHHGYKGWAPGLFRFVKQSENLKEARMQMPF
Nucleotide Sequence CTGCATCTCTGCCAGTCAGAATCTCAGGGTCCTCTTGAGATACACCACCATGGCTATAAGGGTTGGGCTCCTGGGCTTTTCAGGTTTGTAAAGCAATCTGAGAACCTGAAGGAGGCCAGGATGCAGATGCCTTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites