CircRNA Information

General Information
circRNA Basic Information
CircID chr2:98808852|98809000
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CATGGGAGACCAGGATCGGGCAGTGCTTTTATGTCTCTAGAACCTGCAGGTGCAGTGCTCTGGTTCCTGCACAGGTGCAGCCCACCTCCCAGGAGCAGATAAGCAGTGCCGCCCATCCCCTGCAGCTGCACTGGTGCCATTTCAGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:98808852|98809000 hsa-miR-148a-5p 0 0 1
chr2:98808852|98809000 hsa-miR-148a-3p 0 0 1
chr2:98808852|98809000 hsa-miR-183-5p 0 0 1
chr2:98808852|98809000 hsa-miR-183-3p 0 0 1
chr2:98808852|98809000 hsa-miR-152-5p 0 0 1
chr2:98808852|98809000 hsa-miR-152-3p 0 0 1
chr2:98808852|98809000 hsa-miR-150-5p 0 0 1
chr2:98808852|98809000 hsa-miR-150-3p 0 0 1
chr2:98808852|98809000 hsa-miR-148b-5p 0 0 1
chr2:98808852|98809000 hsa-miR-148b-3p 0 0 1
chr2:98808852|98809000 hsa-miR-657 0 1 1
chr2:98808852|98809000 hsa-miR-1301-5p 0 0 1
chr2:98808852|98809000 hsa-miR-1301-3p 0 0 1
chr2:98808852|98809000 hsa-miR-541-5p 0 0 1
chr2:98808852|98809000 hsa-miR-541-3p 0 0 1
chr2:98808852|98809000 hsa-miR-873-5p 0 0 1
chr2:98808852|98809000 hsa-miR-873-3p 0 0 1
chr2:98808852|98809000 hsa-miR-1205 0 1 1
chr2:98808852|98809000 hsa-miR-1286 0 0 1
chr2:98808852|98809000 hsa-miR-1825 0 0 1
chr2:98808852|98809000 hsa-miR-532-3p 0 0 1
chr2:98808852|98809000 hsa-miR-654-5p 0 1 1
chr2:98808852|98809000 hsa-miR-767-3p 0 0 1
chr2:98808852|98809000 hsa-miR-518d-5p 0 1 1
chr2:98808852|98809000 hsa-miR-519b-5p 0 1 1
chr2:98808852|98809000 hsa-miR-519c-5p 0 1 1
chr2:98808852|98809000 hsa-miR-520c-5p 0 1 1
chr2:98808852|98809000 hsa-miR-526a 0 0 1
chr2:98808852|98809000 hsa-miR-203 0 0 1
chr2:98808852|98809000 hsa-miR-608 1 0 0
chr2:98808852|98809000 hsa-miR-1183 1 0 0
chr2:98808852|98809000 hsa-miR-548k 0 1 0
chr2:98808852|98809000 hsa-miR-3651 1 0 0
chr2:98808852|98809000 hsa-miR-3665 1 0 0
chr2:98808852|98809000 hsa-miR-1268b 1 0 0
chr2:98808852|98809000 hsa-miR-3689c 0 1 0
chr2:98808852|98809000 hsa-miR-4488 1 0 0
chr2:98808852|98809000 hsa-miR-4651 1 0 0
chr2:98808852|98809000 hsa-miR-5047 0 1 0
chr2:98808852|98809000 hsa-miR-6085 1 0 0
chr2:98808852|98809000 hsa-miR-6132 1 0 0
chr2:98808852|98809000 hsa-miR-146a-3p 0 1 0
chr2:98808852|98809000 hsa-miR-6799-5p 0 1 0
chr2:98808852|98809000 hsa-miR-3192-5p 0 1 0
chr2:98808852|98809000 hsa-miR-6757-5p 1 0 0
chr2:98808852|98809000 hsa-miR-593-5p 1 1 0
chr2:98808852|98809000 hsa-miR-6716-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6732-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6798-5p 1 0 0
chr2:98808852|98809000 hsa-miR-3130-3p 0 1 0
chr2:98808852|98809000 hsa-miR-6782-5p 1 0 0
chr2:98808852|98809000 hsa-miR-30b-3p 0 1 0
chr2:98808852|98809000 hsa-miR-6753-5p 0 1 0
chr2:98808852|98809000 hsa-miR-4787-5p 1 0 0
chr2:98808852|98809000 hsa-miR-149-3p 1 0 0
chr2:98808852|98809000 hsa-miR-516b-5p 0 1 0
chr2:98808852|98809000 hsa-miR-6720-3p 1 1 0
chr2:98808852|98809000 hsa-miR-383-3p 0 1 0
chr2:98808852|98809000 hsa-miR-1914-5p 0 1 0
chr2:98808852|98809000 hsa-miR-6501-3p 0 1 0
chr2:98808852|98809000 hsa-miR-500a-3p 0 1 0
chr2:98808852|98809000 hsa-miR-1273h-5p 0 1 0
chr2:98808852|98809000 hsa-miR-3689b-3p 0 1 0
chr2:98808852|98809000 hsa-miR-4763-3p 1 0 0
chr2:98808852|98809000 hsa-miR-6775-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6737-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6752-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6756-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6803-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6851-5p 1 0 0
chr2:98808852|98809000 hsa-miR-6722-3p 1 1 0
chr2:98808852|98809000 hsa-miR-6779-5p 0 1 0
chr2:98808852|98809000 hsa-miR-3620-5p 0 1 0
chr2:98808852|98809000 hsa-miR-6836-5p 1 0 0
chr2:98808852|98809000 hsa-miR-1909-3p 1 1 0
chr2:98808852|98809000 hsa-miR-328-5p 1 0 0
chr2:98808852|98809000 hsa-miR-3689a-3p 0 1 0
chr2:98808852|98809000 hsa-miR-6885-5p 1 0 0
chr2:98808852|98809000 hsa-miR-324-3p 0 1 0
chr2:98808852|98809000 hsa-miR-518e-5p 0 1 0
chr2:98808852|98809000 hsa-miR-518f-5p 0 1 0
chr2:98808852|98809000 hsa-miR-519a-5p 0 1 0
chr2:98808852|98809000 hsa-miR-522-5p 0 1 0
chr2:98808852|98809000 hsa-miR-523-5p 0 1 0
chr2:98808852|98809000 hsa-miR-526a-5p 0 1 0
chr2:98808852|98809000 hsa-miR-9851-3p 0 1 0
chr2:98808852|98809000 hsa-miR-10394-5p 0 1 0
chr2:98808852|98809000 hsa-miR-502-3p 0 1 0
chr2:98808852|98809000 hsa-miR-3914 0 1 0
chr2:98808852|98809000 hsa-miR-6835-3p 0 1 0
chr2:98808852|98809000 hsa-miR-518a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:98808852|98809000
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MQVQCSGSCTGAAHLPGADKQCRPSPAAALVPFQR
Nucleotide Sequence CTGCAGGTGCAGTGCTCTGGTTCCTGCACAGGTGCAGCCCACCTCCCAGGAGCAGATAAGCAGTGCCGCCCATCCCCTGCAGCTGCACTGGTGCCATTTCAGAGG

CircID chr2:98808852|98809000
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MVPAQVQPTSQEQISSAAHPLQLHWCHFRG
Nucleotide Sequence CTGGTTCCTGCACAGGTGCAGCCCACCTCCCAGGAGCAGATAAGCAGTGCCGCCCATCCCCTGCAGCTGCACTGGTGCCATTTCAGAGGG

CircID chr2:98808852|98809000
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MAPVQLQGMGGTAYLLLGGGLHLCRNQSTAPAGSRDIKALPDPGLP
Nucleotide Sequence ATGGCACCAGTGCAGCTGCAGGGGATGGGCGGCACTGCTTATCTGCTCCTGGGAGGTGGGCTGCACCTGTGCAGGAACCAGAGCACTGCACCTGCAGGTTCTAGAGACATAAAAGCACTGCCCGATCCTGGTCTCCCA

CircID chr2:98808852|98809000
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MKWHQCSCRGWAALLICSWEVGCTCAGTRALHLQVLET
Nucleotide Sequence CTGAAATGGCACCAGTGCAGCTGCAGGGGATGGGCGGCACTGCTTATCTGCTCCTGGGAGGTGGGCTGCACCTGTGCAGGAACCAGAGCACTGCACCTGCAGGTTCTAGAGACATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites