CircNet

General Information

circRNA Basic Information

CircID	chr3:107710452\|107778519
Strand	+
CircType	exon
Host Gene	ENSG00000114439.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTCCGCAAAGCTGGATGAAGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCCCAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:107710452\|107778519	hsa-miR-29b-1-5p	0	1	1
chr3:107710452\|107778519	hsa-miR-152-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:107710452\|107778519
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MKNLKKNSTASLNIVLLHLTGNVYLSQEKRRRLEMCPQNRLKPAK
Nucleotide Sequence	ATGAAGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCCCAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:107710452\|107778519	FBL	0	0	1
chr3:107710452\|107778519	BUD13	0	1	1
chr3:107710452\|107778519	ELAVL1	0	0	1
chr3:107710452\|107778519	U2AF1	1	0	0
chr3:107710452\|107778519	ACIN1	0	0	2
chr3:107710452\|107778519	CSTF2T	1	0	1
chr3:107710452\|107778519	NOP56	1	0	0
chr3:107710452\|107778519	DDX54	1	0	4
chr3:107710452\|107778519	FUS	1	0	0
chr3:107710452\|107778519	PRPF8	0	2	0
chr3:107710452\|107778519	TARDBP	4	0	0
chr3:107710452\|107778519	TAF15	1	0	0
chr3:107710452\|107778519	FMR1	0	0	4
chr3:107710452\|107778519	U2AF2	10	1	0
chr3:107710452\|107778519	IGF2BP3	0	0	1
chr3:107710452\|107778519	IGF2BP2	0	0	3
chr3:107710452\|107778519	PTBP1	0	1	0
chr3:107710452\|107778519	EIF4A3	4	4	2
chr3:107710452\|107778519	NOP58	0	1	3

CircRNA Information