CircNet

General Information

circRNA Basic Information

CircID	chr3:114001595\|114011021
Strand	-
CircType	exon
Host Gene	ENSG00000163617.10;
Algorism	CIRI2;DCC;
Sequence	AAAACAACAACTGGCCACTGAGTATAACCGGAAACAAGTTCTCCGACACTGCTTTACAGAATGGCAGCATTGGCATGGCGCCGAGCTCCTGAAGAGAGAGCTGGCTCTCACAAAAGAGGAAACTAGGAAGAAGATGGATGCACTGCTGCAGGCAGCATCACTGGGGAAACTCAGTGCCAATGGGTTATCAGGCATCAGTCTACCTGAGGAGGCAACAGCCATGGTGGGTCCACCAGTAAAAAATGGACAGCTCATAAATGTTGGATTTCATCAGCACAGTCCTTTAAATAGTTGAGCTATAACATGTTTCTCTCTCTCAGGAGACTGCTGTGCCCCCTTTGTGGGAAAAGCCTCCCTTGGGAAGCAGTGGTTGTATGCTCAGTCCTCCCCTGGGAAGAACAACAACAGGCAACTTGCAGGGTTCCCTTCAGAATGTCTCTCTGAGTGCACCTGGCAATAAGCAGCACAAGACCCTGGGTGCTGAACCCTCTCAACAGCCTGGCAGCAACGAGACACTCAGAACTACCAGCCAGAAAGCAGAACCGCTTTGCTTGGGTCATTTCCACAACCGCCATGTCTTCCAGCAACAGCTGATTGAGAAGCAAAAGAAGAAACTTCAGGAACAGCAGAAAACAATTCTCGAGCTGAAGAAAAACCTGCAGCTGGCAGAGGCTCAGTGGGCAGCAGAGCATGCCTTAGCAGTCACAGAAGCACAGAGCCACCTGCTGTCAAAGCCCAGAGAAGAGGAACCAAGAACCTGCCAGATGCTTGTGAATTCACCTGTTGCTTCCCCTGGGACTGAAGGCAGAAGTGACTCCCGAAATTCTCTTTCTGGACTCAGAAGGAAACCAAAGCAATTGATGACACCGCATCCCATACTAAAAGGCAGGGCTGTCTCGGTGGTGGCCTTGGTGGTTGTTATCTTCTCTCCTAGAGTAGAATGTGTACACTGGGACTGAATTCTGGCAACTCTTGAGGTTTTGAGACTTGGCAGAACCTGACATCAAAAATCTCAGAATGGTAGACATGTGAGGAGTGGAGTACACCAGAGAGCCCCACTACTTTTTTCCTGCCCCTTTTGCCAACCTTTTTGGCATTCCCAGCCAACACACACACAAAAAAACATAGCTGAAAGGTATATCATTTTTCTGTAATTTGAGATTTGGATTGTGAAAAAAAAAGGAATAATTACACAAATGAGAAAACTCTGAGTAACTGCCAAGGACAAACACTGATAAAGGACACCTGTCATTGTACTTTGTTAATGTTCAAATTTGATCAGTTTACAGTAATCCAAGATAAGTTATTATTTTATAATATTATAACTTGTTGATAGGATTTTAGTAATAAAACCTACAAACCAGATATGTTAATTTGATAACATTTTTGATGCATCTAGAAACATTTATTTATTTGGTACAGGCAGGGTCTTCCTGTGTTGCCCAGGCCTATGGAAGAGAGAGCAATTCAACGAGCTGAATGTAGGCGGATCTTGGCAGAGAAGAAGAAAAAACAAGAAGAAGAAAAATTGCTATCCTAAACATAAAAGATCACATTTCTGTTCAAATTGAGGGTTCTGATATTTCTGGGTTCTAATCTCAATCAGGCCCAGTTAAAGGCCCAAGAGGAGGAACGTCAGAAAAGGGAGGCAGAAGAAAAGGAGGCACAGCTTGAAAGAAAACGAGAAGAGAAGAGACTGAAGAAAATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr3:114001595\|114011021	hsa-miR-150-3p	1	1
chr3:114001595\|114011021	hsa-miR-216a-5p	1	1
chr3:114001595\|114011021	hsa-miR-24-3p	1	1
chr3:114001595\|114011021	hsa-miR-181a-2-3p	1	1
chr3:114001595\|114011021	hsa-miR-33a-3p	1	1
chr3:114001595\|114011021	hsa-miR-148a-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:114001595\|114011021
ORF Type	ORF1
Protein Length	195
Nucleotide Length	585
Protein Sequence	MLSPPLGRTTTGNLQGSLQNVSLSAPGNKQHKTLGAEPSQQPGSNETLRTTSQKAEPLCLGHFHNRHVFQQQLIEKQKKKLQEQQKTILELKKNLQLAEAQWAAEHALAVTEAQSHLLSKPREEEPRTCQMLVNSPVASPGTEGRSDSRNSLSGLRRKPKQLMTPHPILKGRAVSVVALVVVIFSPRVECVHWD*
Nucleotide Sequence	ATGCTCAGTCCTCCCCTGGGAAGAACAACAACAGGCAACTTGCAGGGTTCCCTTCAGAATGTCTCTCTGAGTGCACCTGGCAATAAGCAGCACAAGACCCTGGGTGCTGAACCCTCTCAACAGCCTGGCAGCAACGAGACACTCAGAACTACCAGCCAGAAAGCAGAACCGCTTTGCTTGGGTCATTTCCACAACCGCCATGTCTTCCAGCAACAGCTGATTGAGAAGCAAAAGAAGAAACTTCAGGAACAGCAGAAAACAATTCTCGAGCTGAAGAAAAACCTGCAGCTGGCAGAGGCTCAGTGGGCAGCAGAGCATGCCTTAGCAGTCACAGAAGCACAGAGCCACCTGCTGTCAAAGCCCAGAGAAGAGGAACCAAGAACCTGCCAGATGCTTGTGAATTCACCTGTTGCTTCCCCTGGGACTGAAGGCAGAAGTGACTCCCGAAATTCTCTTTCTGGACTCAGAAGGAAACCAAAGCAATTGATGACACCGCATCCCATACTAAAAGGCAGGGCTGTCTCGGTGGTGGCCTTGGTGGTTGTTATCTTCTCTCCTAGAGTAGAATGTGTACACTGGGACTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF2
Protein Length	132
Nucleotide Length	396
Protein Sequence	MLCCPLSLCQLQVFLQLENCFLLFLKFLLLLLNQLLLEDMAVVEMTQAKRFCFLAGSSECLVAARLLRGFSTQGLVLLIARCTQRDILKGTLQVACCCSSQGRTEHTTTASQGRLFPQRGHSSLLRERNML*
Nucleotide Sequence	ATGCTCTGCTGCCCACTGAGCCTCTGCCAGCTGCAGGTTTTTCTTCAGCTCGAGAATTGTTTTCTGCTGTTCCTGAAGTTTCTTCTTTTGCTTCTCAATCAGCTGTTGCTGGAAGACATGGCGGTTGTGGAAATGACCCAAGCAAAGCGGTTCTGCTTTCTGGCTGGTAGTTCTGAGTGTCTCGTTGCTGCCAGGCTGTTGAGAGGGTTCAGCACCCAGGGTCTTGTGCTGCTTATTGCCAGGTGCACTCAGAGAGACATTCTGAAGGGAACCCTGCAAGTTGCCTGTTGTTGTTCTTCCCAGGGGAGGACTGAGCATACAACCACTGCTTCCCAAGGGAGGCTTTTCCCACAAAGGGGGCACAGCAGTCTCCTGAGAGAGAGAAACATGTTATAG

CircID	chr3:114001595\|114011021
ORF Type	ORF3
Protein Length	85
Nucleotide Length	255
Protein Sequence	MSCPFFTGGPTMAVASSGRLMPDNPLALSFPSDAACSSASIFFLVSSFVRASSLFRSSAPCQCCHSVKQCRRTCFRLYSVASCCF
Nucleotide Sequence	ATGAGCTGTCCATTTTTTACTGGTGGACCCACCATGGCTGTTGCCTCCTCAGGTAGACTGATGCCTGATAACCCATTGGCACTGAGTTTCCCCAGTGATGCTGCCTGCAGCAGTGCATCCATCTTCTTCCTAGTTTCCTCTTTTGTGAGAGCCAGCTCTCTCTTCAGGAGCTCGGCGCCATGCCAATGCTGCCATTCTGTAAAGCAGTGTCGGAGAACTTGTTTCCGGTTATACTCAGTGGCCAGTTGTTGTTTT

CircID	chr3:114001595\|114011021
ORF Type	ORF4
Protein Length	80
Nucleotide Length	240
Protein Sequence	MTGVLYQCLSLAVTQSFLICVIIPFFFTIQISNYRKMIYLSAMFFCVCVGWECQKGWQKGQEKSSGALWCTPLLTCLPF*
Nucleotide Sequence	ATGACAGGTGTCCTTTATCAGTGTTTGTCCTTGGCAGTTACTCAGAGTTTTCTCATTTGTGTAATTATTCCTTTTTTTTTCACAATCCAAATCTCAAATTACAGAAAAATGATATACCTTTCAGCTATGTTTTTTTGTGTGTGTGTTGGCTGGGAATGCCAAAAAGGTTGGCAAAAGGGGCAGGAAAAAAGTAGTGGGGCTCTCTGGTGTACTCCACTCCTCACATGTCTACCATTCTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF5
Protein Length	68
Nucleotide Length	204
Protein Sequence	MGCGVINCFGFLLSPEREFRESLLPSVPGEATGEFTSIWQVLGSSSLGFDSRWLCASVTAKACSAAH*
Nucleotide Sequence	ATGGGATGCGGTGTCATCAATTGCTTTGGTTTCCTTCTGAGTCCAGAAAGAGAATTTCGGGAGTCACTTCTGCCTTCAGTCCCAGGGGAAGCAACAGGTGAATTCACAAGCATCTGGCAGGTTCTTGGTTCCTCTTCTCTGGGCTTTGACAGCAGGTGGCTCTGTGCTTCTGTGACTGCTAAGGCATGCTCTGCTGCCCACTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF6
Protein Length	54
Nucleotide Length	162
Protein Sequence	MDALLQAASLGKLSANGLSGISLPEEATAMVGPPVKNGQLINVGFHQHSPLNS*
Nucleotide Sequence	ATGGATGCACTGCTGCAGGCAGCATCACTGGGGAAACTCAGTGCCAATGGGTTATCAGGCATCAGTCTACCTGAGGAGGCAACAGCCATGGTGGGTCCACCAGTAAAAAATGGACAGCTCATAAATGTTGGATTTCATCAGCACAGTCCTTTAAATAGTTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF7
Protein Length	50
Nucleotide Length	150
Protein Sequence	MSTILRFLMSGSAKSQNLKSCQNSVPVYTFYSRREDNNHQGHHRDSPAF*
Nucleotide Sequence	ATGTCTACCATTCTGAGATTTTTGATGTCAGGTTCTGCCAAGTCTCAAAACCTCAAGAGTTGCCAGAATTCAGTCCCAGTGTACACATTCTACTCTAGGAGAGAAGATAACAACCACCAAGGCCACCACCGAGACAGCCCTGCCTTTTAG

CircID	chr3:114001595\|114011021
ORF Type	ORF8
Protein Length	47
Nucleotide Length	141
Protein Sequence	MFLSLRRLLCPLCGKSLPWEAVVVCSVLPWEEQQQATCRVPFRMSL*
Nucleotide Sequence	ATGTTTCTCTCTCTCAGGAGACTGCTGTGCCCCCTTTGTGGGAAAAGCCTCCCTTGGGAAGCAGTGGTTGTATGCTCAGTCCTCCCCTGGGAAGAACAACAACAGGCAACTTGCAGGGTTCCCTTCAGAATGTCTCTCTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF9
Protein Length	34
Nucleotide Length	102
Protein Sequence	MHCCRQHHWGNSVPMGYQASVYLRRQQPWWVHQ*
Nucleotide Sequence	ATGCACTGCTGCAGGCAGCATCACTGGGGAAACTCAGTGCCAATGGGTTATCAGGCATCAGTCTACCTGAGGAGGCAACAGCCATGGTGGGTCCACCAGTAA

CircID	chr3:114001595\|114011021
ORF Type	ORF10
Protein Length	32
Nucleotide Length	96
Protein Sequence	MRCHQLLWFPSESRKRISGVTSAFSPRGSNR*
Nucleotide Sequence	ATGCGGTGTCATCAATTGCTTTGGTTTCCTTCTGAGTCCAGAAAGAGAATTTCGGGAGTCACTTCTGCCTTCAGTCCCAGGGGAAGCAACAGGTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF11
Protein Length	32
Nucleotide Length	96
Protein Sequence	MFRIAIFLLLVFSSSLPRSAYIQLVELLSLP*
Nucleotide Sequence	ATGTTTAGGATAGCAATTTTTCTTCTTCTTGTTTTTTCTTCTTCTCTGCCAAGATCCGCCTACATTCAGCTCGTTGAATTGCTCTCTCTTCCATAG

CircID	chr3:114001595\|114011021
ORF Type	ORF12
Protein Length	30
Nucleotide Length	90
Protein Sequence	MEERAIQRAECRRILAEKKKKQEEEKLLS*
Nucleotide Sequence	ATGGAAGAGAGAGCAATTCAACGAGCTGAATGTAGGCGGATCTTGGCAGAGAAGAAGAAAAAACAAGAAGAAGAAAAATTGCTATCCTAA

CircID	chr3:114001595\|114011021
ORF Type	ORF13
Protein Length	30
Nucleotide Length	90
Protein Sequence	MHLETFIYLVQAGSSCVAQAYGRESNSTS*
Nucleotide Sequence	ATGCATCTAGAAACATTTATTTATTTGGTACAGGCAGGGTCTTCCTGTGTTGCCCAGGCCTATGGAAGAGAGAGCAATTCAACGAGCTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF14
Protein Length	66
Nucleotide Length	198
Protein Sequence	FDNIFDASRNIYLFGTGRVFLCCPGLWKREQFNELNVGGSWQRRRKNKKKKNCYPKHKRSHFCSN*
Nucleotide Sequence	TTTGATAACATTTTTGATGCATCTAGAAACATTTATTTATTTGGTACAGGCAGGGTCTTCCTGTGTTGCCCAGGCCTATGGAAGAGAGAGCAATTCAACGAGCTGAATGTAGGCGGATCTTGGCAGAGAAGAAGAAAAAACAAGAAGAAGAAAAATTGCTATCCTAAACATAAAAGATCACATTTCTGTTCAAATTGA

CircID	chr3:114001595\|114011021
ORF Type	ORF15
Protein Length	62
Nucleotide Length	186
Protein Sequence	VCVLAGNAKKVGKRGRKKVVGLSGVLHSSHVYHSEIFDVRFCQVSKPQELPEFSPSVHILL*
Nucleotide Sequence	GTGTGTGTGTTGGCTGGGAATGCCAAAAAGGTTGGCAAAAGGGGCAGGAAAAAAGTAGTGGGGCTCTCTGGTGTACTCCACTCCTCACATGTCTACCATTCTGAGATTTTTGATGTCAGGTTCTGCCAAGTCTCAAAACCTCAAGAGTTGCCAGAATTCAGTCCCAGTGTACACATTCTACTCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:114001595\|114011021	MOV10	0	21	2
chr3:114001595\|114011021	ELAVL1	5	49	13
chr3:114001595\|114011021	NCBP3	0	0	1
chr3:114001595\|114011021	TIAL1	0	5	0
chr3:114001595\|114011021	FAM120A	0	6	2
chr3:114001595\|114011021	PUM2	0	1	0
chr3:114001595\|114011021	CPSF7	3	15	11
chr3:114001595\|114011021	YTHDF1	0	11	3
chr3:114001595\|114011021	UPF1	0	33	0
chr3:114001595\|114011021	TAF15	1	3	0
chr3:114001595\|114011021	CAPRIN1	0	10	1
chr3:114001595\|114011021	FMR1	0	21	5
chr3:114001595\|114011021	CPSF6	2	15	4
chr3:114001595\|114011021	NUDT21	1	3	3
chr3:114001595\|114011021	TIA1	0	3	0
chr3:114001595\|114011021	CPSF3	0	1	1
chr3:114001595\|114011021	RBM15B	5	3	0
chr3:114001595\|114011021	CPSF1	0	1	0
chr3:114001595\|114011021	FUS	0	14	1
chr3:114001595\|114011021	SRSF1	1	0	0
chr3:114001595\|114011021	NOP58	1	0	2
chr3:114001595\|114011021	EIF3B	1	0	0
chr3:114001595\|114011021	U2AF2	14	4	0
chr3:114001595\|114011021	HNRNPU	0	2	0
chr3:114001595\|114011021	DDX54	0	1	1
chr3:114001595\|114011021	CPSF2	0	1	0
chr3:114001595\|114011021	EFTUD2	0	0	1
chr3:114001595\|114011021	HNRNPA2B1	0	0	1
chr3:114001595\|114011021	FIP1L1	5	10	6
chr3:114001595\|114011021	PTBP1	0	6	0
chr3:114001595\|114011021	HNRNPC	44	64	50
chr3:114001595\|114011021	HNRNPD	0	4	0
chr3:114001595\|114011021	ZNF184	0	0	1
chr3:114001595\|114011021	DDX3X	1	45	0
chr3:114001595\|114011021	ZC3H7B	0	23	3
chr3:114001595\|114011021	STAU1	1	2	0
chr3:114001595\|114011021	HNRNPA1	7	11	0
chr3:114001595\|114011021	LIN28B	1	21	0
chr3:114001595\|114011021	LIN28A	0	3	0
chr3:114001595\|114011021	FXR1	0	2	0
chr3:114001595\|114011021	FXR2	0	5	0
chr3:114001595\|114011021	IGF2BP1	0	13	3
chr3:114001595\|114011021	IGF2BP3	0	12	2
chr3:114001595\|114011021	IGF2BP2	0	11	6
chr3:114001595\|114011021	TARDBP	2	22	7
chr3:114001595\|114011021	YTHDC1	1	7	1
chr3:114001595\|114011021	BUD13	0	0	1
chr3:114001595\|114011021	YTHDF2	1	2	0
chr3:114001595\|114011021	CSTF2T	1	7	5
chr3:114001595\|114011021	SRRM4	0	1	0
chr3:114001595\|114011021	CSTF2	10	8	2
chr3:114001595\|114011021	EIF4A3	1	1	15
chr3:114001595\|114011021	WDR33	1	1	0
chr3:114001595\|114011021	YTHDF3	0	1	0
chr3:114001595\|114011021	ALKBH5	0	1	0
chr3:114001595\|114011021	ATXN2	0	32	8
chr3:114001595\|114011021	EWSR1	0	6	0
chr3:114001595\|114011021	ILF3	1	0	1
chr3:114001595\|114011021	FBL	0	0	3

CircRNA Information