CircRNA Information

General Information
circRNA Basic Information
CircID chr3:11556280|11556421
Strand +
CircType exon
Host Gene ENSG00000197548.11;
Algorism CIRI2;
Sequence AAGGGCGTCACTCTGGGAGGGGTCGGCGGTGCTGGCGGCCGGGTCCCTGGTGCACTGACCTATCTGGGATAGGCAGTACCCTGGAGGGGGGCCTGGGGCAGAGGAGGCAGCAGAAAACCAAACATTTCACTGAGAAAGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:11556280|11556421 hsa-miR-148a-5p 0 0 1
chr3:11556280|11556421 hsa-miR-148a-3p 0 0 1
chr3:11556280|11556421 hsa-miR-152-5p 0 0 1
chr3:11556280|11556421 hsa-miR-152-3p 0 0 1
chr3:11556280|11556421 hsa-miR-148b-5p 0 0 1
chr3:11556280|11556421 hsa-miR-148b-3p 0 0 1
chr3:11556280|11556421 hsa-miR-659-5p 0 0 1
chr3:11556280|11556421 hsa-miR-659-3p 0 0 1
chr3:11556280|11556421 hsa-miR-1249-5p 0 0 1
chr3:11556280|11556421 hsa-miR-1249-3p 0 0 1
chr3:11556280|11556421 hsa-miR-767-5p 0 0 1
chr3:11556280|11556421 hsa-miR-941 0 1 1
chr3:11556280|11556421 hsa-miR-324-3p 1 0 1
chr3:11556280|11556421 hsa-miR-544 0 0 1
chr3:11556280|11556421 hsa-miR-203 0 0 1
chr3:11556280|11556421 hsa-miR-346 1 1 0
chr3:11556280|11556421 hsa-miR-613 1 0 0
chr3:11556280|11556421 hsa-miR-1913 1 1 0
chr3:11556280|11556421 hsa-miR-4469 0 1 0
chr3:11556280|11556421 hsa-miR-5193 0 1 0
chr3:11556280|11556421 hsa-miR-6071 0 1 0
chr3:11556280|11556421 hsa-miR-18a-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6747-3p 0 1 0
chr3:11556280|11556421 hsa-miR-4665-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6836-3p 1 1 0
chr3:11556280|11556421 hsa-miR-4697-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6728-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6882-3p 0 1 0
chr3:11556280|11556421 hsa-miR-1908-3p 1 1 0
chr3:11556280|11556421 hsa-miR-5001-3p 0 1 0
chr3:11556280|11556421 hsa-miR-7161-3p 1 0 0
chr3:11556280|11556421 hsa-miR-6780a-3p 0 1 0
chr3:11556280|11556421 hsa-miR-3648 1 0 0
chr3:11556280|11556421 hsa-miR-30a-3p 0 1 0
chr3:11556280|11556421 hsa-miR-1237-3p 1 0 0
chr3:11556280|11556421 hsa-miR-525-5p 0 1 0
chr3:11556280|11556421 hsa-miR-6887-3p 0 1 0
chr3:11556280|11556421 hsa-miR-1914-5p 1 0 0
chr3:11556280|11556421 hsa-miR-203a-3p 0 1 0
chr3:11556280|11556421 hsa-miR-6846-3p 0 1 0
chr3:11556280|11556421 hsa-miR-6850-3p 0 1 0
chr3:11556280|11556421 hsa-miR-30d-3p 1 1 0
chr3:11556280|11556421 hsa-miR-10396a-3p 1 1 0
chr3:11556280|11556421 hsa-miR-10396b-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6791-3p 0 1 0
chr3:11556280|11556421 hsa-miR-4722-3p 1 0 0
chr3:11556280|11556421 hsa-miR-6893-3p 1 1 0
chr3:11556280|11556421 hsa-miR-6805-3p 1 0 0
chr3:11556280|11556421 hsa-miR-6829-3p 0 1 0
chr3:11556280|11556421 hsa-miR-4701-5p 1 0 0
chr3:11556280|11556421 hsa-miR-6781-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:11556280|11556421
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MVFCCLLCPRPPSRVLPIPDRSVHQGPGRQHRRPLPE
Nucleotide Sequence TTGGTTTTCTGCTGCCTCCTCTGCCCCAGGCCCCCCTCCAGGGTACTGCCTATCCCAGATAGGTCAGTGCACCAGGGACCCGGCCGCCAGCACCGCCGACCCCTCCCAGAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites