CircRNA Information

General Information
circRNA Basic Information
CircID chr3:122540472|122540599
Strand -
CircType exon
Host Gene ENSG00000138496.15;
Algorism CIRI2;
Sequence CTAACGAGCGCCAAAGGCCTCGCTCCTTTTTCCTTGCCATTTCCTCCTGTACTTTACAAAGCATATCTTCAATGTTCATAACCACCTCAATGAGGTCAGCCCGGGCTCCTTCAATCTCTAACTCTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:122540472|122540599 hsa-miR-31-5p 0 0 1
chr3:122540472|122540599 hsa-miR-31-3p 0 0 1
chr3:122540472|122540599 hsa-miR-559 0 0 1
chr3:122540472|122540599 hsa-miR-548j-5p 0 0 1
chr3:122540472|122540599 hsa-miR-548j-3p 0 0 1
chr3:122540472|122540599 hsa-miR-548k 0 0 1
chr3:122540472|122540599 hsa-miR-548l 0 0 1
chr3:122540472|122540599 hsa-miR-1303 0 0 1
chr3:122540472|122540599 hsa-miR-1252-5p 0 0 1
chr3:122540472|122540599 hsa-miR-1252-3p 0 0 1
chr3:122540472|122540599 hsa-miR-876-3p 0 0 1
chr3:122540472|122540599 hsa-miR-548b-5p 0 0 1
chr3:122540472|122540599 hsa-miR-548d-5p 0 0 1
chr3:122540472|122540599 hsa-miR-548c-5p 0 0 1
chr3:122540472|122540599 hsa-miR-548a-5p 0 0 1
chr3:122540472|122540599 hsa-miR-548i 0 0 1
chr3:122540472|122540599 hsa-miR-548h 0 0 1
chr3:122540472|122540599 hsa-miR-608 1 0 0
chr3:122540472|122540599 hsa-miR-765 1 0 0
chr3:122540472|122540599 hsa-miR-665 1 0 0
chr3:122540472|122540599 hsa-miR-1293 1 0 0
chr3:122540472|122540599 hsa-miR-1538 1 0 0
chr3:122540472|122540599 hsa-miR-3132 1 0 0
chr3:122540472|122540599 hsa-miR-4266 1 0 0
chr3:122540472|122540599 hsa-miR-4479 1 0 0
chr3:122540472|122540599 hsa-miR-4538 1 0 0
chr3:122540472|122540599 hsa-miR-4651 1 0 0
chr3:122540472|122540599 hsa-miR-4689 1 0 0
chr3:122540472|122540599 hsa-miR-4739 1 0 0
chr3:122540472|122540599 hsa-miR-4741 1 0 0
chr3:122540472|122540599 hsa-miR-4779 1 0 0
chr3:122540472|122540599 hsa-miR-4784 1 0 0
chr3:122540472|122540599 hsa-miR-5093 1 0 0
chr3:122540472|122540599 hsa-miR-6090 1 0 0
chr3:122540472|122540599 hsa-miR-6124 1 0 0
chr3:122540472|122540599 hsa-miR-6134 1 0 0
chr3:122540472|122540599 hsa-miR-6165 1 0 0
chr3:122540472|122540599 hsa-miR-7150 1 0 0
chr3:122540472|122540599 hsa-miR-8054 1 0 0
chr3:122540472|122540599 hsa-miR-9718 1 0 0
chr3:122540472|122540599 hsa-miR-12115 1 0 0
chr3:122540472|122540599 hsa-miR-12118 1 0 0
chr3:122540472|122540599 hsa-miR-12120 1 0 0
chr3:122540472|122540599 hsa-miR-12127 1 0 0
chr3:122540472|122540599 hsa-miR-135a-3p 1 0 0
chr3:122540472|122540599 hsa-miR-4747-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6809-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4433a-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6765-5p 1 0 0
chr3:122540472|122540599 hsa-miR-125b-1-3p 1 0 0
chr3:122540472|122540599 hsa-miR-7106-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6894-5p 1 0 0
chr3:122540472|122540599 hsa-miR-766-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6089 1 0 0
chr3:122540472|122540599 hsa-miR-7847-3p 1 0 0
chr3:122540472|122540599 hsa-miR-4695-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6746-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4653-3p 1 0 0
chr3:122540472|122540599 hsa-miR-4722-5p 1 0 0
chr3:122540472|122540599 hsa-miR-3928-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6716-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6798-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6782-5p 1 0 0
chr3:122540472|122540599 hsa-miR-3150b-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6771-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6823-5p 1 0 0
chr3:122540472|122540599 hsa-miR-877-5p 1 0 0
chr3:122540472|122540599 hsa-miR-149-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6824-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6789-5p 1 0 0
chr3:122540472|122540599 hsa-miR-3162-5p 1 0 0
chr3:122540472|122540599 hsa-miR-5584-5p 1 0 0
chr3:122540472|122540599 hsa-miR-873-3p 1 0 0
chr3:122540472|122540599 hsa-miR-1207-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4763-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6812-5p 1 0 0
chr3:122540472|122540599 hsa-miR-5001-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6737-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6769a-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6803-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6819-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6851-5p 1 0 0
chr3:122540472|122540599 hsa-miR-11181-3p 1 0 0
chr3:122540472|122540599 hsa-miR-1249-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6797-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6808-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6879-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6836-5p 1 0 0
chr3:122540472|122540599 hsa-miR-1909-3p 1 0 0
chr3:122540472|122540599 hsa-miR-4649-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6729-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6794-5p 1 0 0
chr3:122540472|122540599 hsa-miR-6858-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4436b-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6831-5p 1 0 0
chr3:122540472|122540599 hsa-miR-7151-3p 1 0 0
chr3:122540472|122540599 hsa-miR-3173-3p 1 0 0
chr3:122540472|122540599 hsa-miR-3679-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4747-5p 1 0 0
chr3:122540472|122540599 hsa-miR-4716-3p 1 0 0
chr3:122540472|122540599 hsa-miR-6724-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:122540472|122540599
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MNIEDMLCKVQEEMARKKERGLWRSL
Nucleotide Sequence ATGAACATTGAAGATATGCTTTGTAAAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAGGCCTTTGGCGCTCGTTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab