CircNet

General Information

circRNA Basic Information

CircID	chr3:123124066\|123124343
Strand	+
CircType	exon
Host Gene	ENSG00000065485.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGCTGGCCGGGATGAATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAGGACATTGTGGAGTGGCTGAAGAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:123124066\|123124343	hsa-miR-122-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-122-3p	0	0	1
chr3:123124066\|123124343	hsa-miR-425-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-425-3p	0	0	1
chr3:123124066\|123124343	hsa-miR-539-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-539-3p	0	0	1
chr3:123124066\|123124343	hsa-miR-570-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-570-3p	0	0	1
chr3:123124066\|123124343	hsa-miR-578	0	0	1
chr3:123124066\|123124343	hsa-miR-580-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-580-3p	0	0	1
chr3:123124066\|123124343	hsa-miR-765	0	0	1
chr3:123124066\|123124343	hsa-miR-934	0	0	1
chr3:123124066\|123124343	hsa-miR-92a-2-5p	0	1	1
chr3:123124066\|123124343	hsa-miR-145-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-770-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-1224-5p	0	0	1
chr3:123124066\|123124343	hsa-miR-1300	0	0	1
chr3:123124066\|123124343	hsa-miR-549	0	0	1
chr3:123124066\|123124343	hsa-miR-3115	0	1	0
chr3:123124066\|123124343	hsa-miR-3185	1	0	0
chr3:123124066\|123124343	hsa-miR-4289	0	1	0
chr3:123124066\|123124343	hsa-miR-4422	0	1	0
chr3:123124066\|123124343	hsa-miR-4656	1	0	0
chr3:123124066\|123124343	hsa-miR-4739	1	0	0
chr3:123124066\|123124343	hsa-miR-5698	1	1	0
chr3:123124066\|123124343	hsa-miR-8089	0	1	0
chr3:123124066\|123124343	hsa-miR-12118	0	1	0
chr3:123124066\|123124343	hsa-miR-3692-5p	0	1	0
chr3:123124066\|123124343	hsa-miR-1226-5p	0	1	0
chr3:123124066\|123124343	hsa-miR-6847-5p	1	0	0
chr3:123124066\|123124343	hsa-miR-6891-5p	0	1	0
chr3:123124066\|123124343	hsa-miR-549a-3p	0	1	0
chr3:123124066\|123124343	hsa-miR-4782-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:123124066\|123124343
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MNVYSSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVEWLK
Nucleotide Sequence	ATGAATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAGGACATTGTGGAGTGGCTGAAG

CircID	chr3:123124066\|123124343
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MSTPLNLKTSRRSTACAASPPSAILRKDGSCSSMTTMGPQLRTLWSG*
Nucleotide Sequence	ATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAGGACATTGTGGAGTGGCTGA

CircID	chr3:123124066\|123124343
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	LQPLHNVLSCGPIVVILEQEPSFLKIADGGEAAHAVLLLDVFKFRGVDIHPGQH
Nucleotide Sequence	CTTCAGCCACTCCACAATGTCCTCAGCTGTGGACCCATAGTTGTCATACTGGAACAAGAACCGTCCTTTCTCAAAATAGCAGATGGTGGGGAAGCCGCGCACGCTGTACTCCTCCTTGATGTTTTCAAATTCAGAGGAGTAGACATTCATCCCGGCCAGCAC

CircID	chr3:123124066\|123124343
ORF Type	ORF1
Protein Length	30
Nucleotide Length	93
Protein Sequence	MWTHSCHTGTRTVLSQNSRWWGSRARCTPP
Nucleotide Sequence	CTGTGGACCCATAGTTGTCATACTGGAACAAGAACCGTCCTTTCTCAAAATAGCAGATGGTGGGGAAGCCGCGCACGCTGTACTCCTCCTTGA

CircID	chr3:123124066\|123124343
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MEQEPSFLKIADGGEAAHAVLLLDVFKFRGVDIHPGQH
Nucleotide Sequence	CTGGAACAAGAACCGTCCTTTCTCAAAATAGCAGATGGTGGGGAAGCCGCGCACGCTGTACTCCTCCTTGATGTTTTCAAATTCAGAGGAGTAGACATTCATCCCGGCCAGCAC

CircID	chr3:123124066\|123124343
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	MAGMNVYSSEFENIKEEYSVRGFPTICYFEKGRFLFQYDNYGSTAEDIVEWLK
Nucleotide Sequence	CTGGCCGGGATGAATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAGGACATTGTGGAGTGGCTGAAG

CircID	chr3:123124066\|123124343
ORF Type	ORF4
Protein Length	47
Nucleotide Length	144
Protein Sequence	MSTPLNLKTSRRSTACAASPPSAILRKDGSCSSMTTMGPQLRTLWSG
Nucleotide Sequence	ATGTCTACTCCTCTGAATTTGAAAACATCAAGGAGGAGTACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGAAAGGACGGTTCTTGTTCCAGTATGACAACTATGGGTCCACAGCTGAGGACATTGTGGAGTGGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:123124066\|123124343	ELAVL1	0	2	0
chr3:123124066\|123124343	SF3B4	2	1	0
chr3:123124066\|123124343	PRPF8	0	2	0
chr3:123124066\|123124343	FUS	0	2	0
chr3:123124066\|123124343	SRSF1	0	1	0
chr3:123124066\|123124343	SRSF3	0	1	0
chr3:123124066\|123124343	U2AF1	1	0	0
chr3:123124066\|123124343	U2AF2	11	0	1
chr3:123124066\|123124343	DDX54	0	2	0
chr3:123124066\|123124343	RBM10	1	0	0
chr3:123124066\|123124343	HNRNPM	2	0	0
chr3:123124066\|123124343	SF3A3	2	0	0
chr3:123124066\|123124343	PTBP1	5	3	0
chr3:123124066\|123124343	HNRNPC	1	0	0
chr3:123124066\|123124343	HNRNPA1	1	0	0
chr3:123124066\|123124343	MSI1	1	0	0
chr3:123124066\|123124343	ACIN1	0	0	2
chr3:123124066\|123124343	SND1	1	0	0
chr3:123124066\|123124343	IGF2BP2	0	1	0
chr3:123124066\|123124343	TARDBP	0	1	0
chr3:123124066\|123124343	CSTF2T	1	0	0
chr3:123124066\|123124343	CSTF2	0	1	0
chr3:123124066\|123124343	FBL	0	2	0
chr3:123124066\|123124343	EIF4A3	6	4	4
chr3:123124066\|123124343	AGO2	2	0	0

CircRNA Information