CircRNA Information

General Information
circRNA Basic Information
CircID chr3:123620207|123626844
Strand -
CircType exon
Host Gene ENSG00000065534.17;
Algorism CIRI2;
Sequence CTTCAGATTCTAGTTTTTCTGCATTGAGCGGGCTGGTTGGTGACCCTGTTGAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCATGTACTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:123620207|123626844 hsa-miR-31-5p 0 0 1
chr3:123620207|123626844 hsa-miR-31-3p 0 0 1
chr3:123620207|123626844 hsa-miR-183-5p 0 0 1
chr3:123620207|123626844 hsa-miR-183-3p 0 0 1
chr3:123620207|123626844 hsa-miR-421 0 1 1
chr3:123620207|123626844 hsa-miR-298 0 0 1
chr3:123620207|123626844 hsa-miR-1266-5p 0 0 1
chr3:123620207|123626844 hsa-miR-1266-3p 0 0 1
chr3:123620207|123626844 hsa-miR-1252-5p 0 0 1
chr3:123620207|123626844 hsa-miR-1252-3p 0 0 1
chr3:123620207|123626844 hsa-miR-1207-5p 0 0 1
chr3:123620207|123626844 hsa-miR-7 0 0 1
chr3:123620207|123626844 hsa-miR-24 0 0 1
chr3:123620207|123626844 hsa-miR-3154 1 0 0
chr3:123620207|123626844 hsa-miR-3185 1 0 0
chr3:123620207|123626844 hsa-miR-3909 0 1 0
chr3:123620207|123626844 hsa-miR-4437 0 1 0
chr3:123620207|123626844 hsa-miR-4487 1 0 0
chr3:123620207|123626844 hsa-miR-4490 1 0 0
chr3:123620207|123626844 hsa-miR-4533 1 0 0
chr3:123620207|123626844 hsa-miR-4656 1 0 0
chr3:123620207|123626844 hsa-miR-5093 1 0 0
chr3:123620207|123626844 hsa-miR-5693 0 1 0
chr3:123620207|123626844 hsa-miR-6076 1 0 0
chr3:123620207|123626844 hsa-miR-7150 1 0 0
chr3:123620207|123626844 hsa-miR-8085 1 0 0
chr3:123620207|123626844 hsa-miR-12120 1 0 0
chr3:123620207|123626844 hsa-miR-12124 1 1 0
chr3:123620207|123626844 hsa-miR-7-5p 0 1 0
chr3:123620207|123626844 hsa-miR-766-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6873-5p 1 0 0
chr3:123620207|123626844 hsa-miR-4695-5p 1 0 0
chr3:123620207|123626844 hsa-miR-24-3p 0 1 0
chr3:123620207|123626844 hsa-miR-1178-5p 0 1 0
chr3:123620207|123626844 hsa-miR-6716-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6827-5p 0 1 0
chr3:123620207|123626844 hsa-miR-5088-5p 0 1 0
chr3:123620207|123626844 hsa-miR-3127-5p 1 1 0
chr3:123620207|123626844 hsa-miR-5584-5p 0 1 0
chr3:123620207|123626844 hsa-miR-493-5p 1 0 0
chr3:123620207|123626844 hsa-miR-4677-3p 0 1 0
chr3:123620207|123626844 hsa-miR-6865-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6743-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6797-5p 0 1 0
chr3:123620207|123626844 hsa-miR-6879-5p 1 0 0
chr3:123620207|123626844 hsa-miR-4685-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6735-5p 1 0 0
chr3:123620207|123626844 hsa-miR-4436b-3p 1 0 0
chr3:123620207|123626844 hsa-miR-6511a-5p 1 0 0
chr3:123620207|123626844 hsa-miR-3173-3p 1 1 0
chr3:123620207|123626844 hsa-miR-3679-5p 1 0 0
chr3:123620207|123626844 hsa-miR-4747-5p 1 0 0
chr3:123620207|123626844 hsa-miR-6876-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:123620207|123626844
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MSGLVGDPVEDFLPLSPEIIAIEDSLPMALTALPVFCHFLLAMY
Nucleotide Sequence TTGAGCGGGCTGGTTGGTGACCCTGTTGAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCATGTAC

CircID chr3:123620207|123626844
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MARRKWQKTGNAVRAIGRLSSMAMISGLSGRKSSTGSPTSPLNAEKLESE
Nucleotide Sequence ATGGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTCAACAGGGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGAATCTGAA

CircID chr3:123620207|123626844
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MAENGQCCESHWKTVLYGNDLRAQWQEILNRVTNQPAQCRKTRI
Nucleotide Sequence ATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTCAACAGGGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGAATCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites