CircNet

General Information

circRNA Basic Information

CircID	chr3:123664105\|123667187
Strand	-
CircType	exon
Host Gene	ENSG00000065534.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGATGCGACTGTGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGCAGATCCAGGAAAGCGAGCACATGAAGGTGGAGAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTGCTACACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:123664105\|123667187	hsa-miR-138-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:123664105\|123667187
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV
Nucleotide Sequence	ATGAAGGTGGAGAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTGCTACACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTG

CircID	chr3:123664105\|123667187
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MAASSPSWPRARSTAAATHCWWRTSWAAGRPRSTSLSW
Nucleotide Sequence	ATGGCAGCAAGCTCACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTGCTACACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGG

CircID	chr3:123664105\|123667187
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MVSLLPFSLFSTFMCSLSWICLRRCLGGRFLFHSRI
Nucleotide Sequence	ATGGTGAGCTTGCTGCCATTCTCGCTGTTCTCCACCTTCATGTGCTCGCTTTCCTGGATCTGCCTTCGGAGGTGTCTTGGGGGCAGGTTTCTTTTTCACAGTCGCATC

CircID	chr3:123664105\|123667187
ORF Type	ORF4
Protein Length	64
Nucleotide Length	192
Protein Sequence	VKKKPAPKTPPKADPGKRAHEGGEQREWQQAHHPGRAPGALRLLHTAGGEQAGQQAGPGQPHCR
Nucleotide Sequence	GTGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGCAGATCCAGGAAAGCGAGCACATGAAGGTGGAGAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTGCTACACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGTCGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:123664105\|123667187	U2AF2	0	1	0
chr3:123664105\|123667187	SRSF1	0	1	2
chr3:123664105\|123667187	NOP58	1	0	0
chr3:123664105\|123667187	PRPF8	0	2	0
chr3:123664105\|123667187	FAM120A	0	1	0
chr3:123664105\|123667187	SF3A3	1	1	0
chr3:123664105\|123667187	MOV10	0	1	0
chr3:123664105\|123667187	BCCIP	0	1	0
chr3:123664105\|123667187	PCBP2	0	4	0
chr3:123664105\|123667187	HNRNPUL1	0	1	0
chr3:123664105\|123667187	DKC1	0	0	1
chr3:123664105\|123667187	BUD13	0	0	1
chr3:123664105\|123667187	PTBP1	0	2	0
chr3:123664105\|123667187	IGF2BP2	1	2	2
chr3:123664105\|123667187	EIF4A3	1	5	4
chr3:123664105\|123667187	FUS	1	1	0

CircRNA Information