CircNet

General Information

circRNA Basic Information

CircID	chr3:123737378\|123740001
Strand	-
CircType	exon
Host Gene	ENSG00000065534.18;
Algorism	CIRI2;
Sequence	GAAGTTTTGCGAAGCAGCTTGGTCAGCCTGTTGTTTCCAAAACCTTAGGGGATAGATTTTCAGCTCCAGCAGTGGAGACCCGTCCTAGCATCTGGGGGGAGTGCCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATTCTCCTGCAAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTGCCTGGTGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:123737378\|123740001
ORF Type	ORF1
Protein Length	118
Nucleotide Length	354
Protein Sequence	MESSADIEAFPDPFTTRHVYTPTSSWLTPWISRTCMPFFSDTDTRALGCSGTFPLSQVTCGWGRPVILQENRPICPSLTTTRPSLVANFGGHSPQMLGRVSTAGAENLSPKVLETTG*
Nucleotide Sequence	ATGGAAAGTTCAGCTGACATCGAGGCCTTCCCCGACCCGTTCACCACCAGGCACGTGTACACTCCCACGTCATCTTGGTTGACTCCATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACTCGGCTGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGATCTTGCAGGAGAATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACTTTGGTGGGCACTCCCCCCAGATGCTAGGACGGGTCTCCACTGCTGGAGCTGAAAATCTATCCCCTAAGGTTTTGGAAACAACAGGCTGA

CircID	chr3:123737378\|123740001
ORF Type	ORF2
Protein Length	77
Nucleotide Length	231
Protein Sequence	MDFQNLHAVLLRHRHTGTRLQWNISLEPGDLRLGPASDLAGESSHLSFFDHNSAQLGSKLWWALPPDARTGLHCWS*
Nucleotide Sequence	ATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACTCGGCTGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGATCTTGCAGGAGAATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACTTTGGTGGGCACTCCCCCCAGATGCTAGGACGGGTCTCCACTGCTGGAGCTGA

CircID	chr3:123737378\|123740001
ORF Type	ORF3
Protein Length	75
Nucleotide Length	225
Protein Sequence	MGRFSCKITGRPQPQVTWLKGNVPLQPSARVSVSEKNGMQVLEIHGVNQDDVGVYTCLVVNGSGKASMSAELSIQ
Nucleotide Sequence	ATGGGACGATTCTCCTGCAAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTGCCTGGTGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAA

CircID	chr3:123737378\|123740001
ORF Type	ORF4
Protein Length	39
Nucleotide Length	117
Protein Sequence	MFHCSRVPVCLCLRRTACRFWKSMESTKMTWECTRAWW*
Nucleotide Sequence	ATGTTCCACTGCAGCCGAGTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTGCCTGGTGGTGA

CircID	chr3:123737378\|123740001
ORF Type	ORF5
Protein Length	53
Nucleotide Length	159
Protein Sequence	VPTKVCYQAGPSCGQRRTDGTILLQDHWPAPTAGHLAQGKCSTAAECPCVCV*
Nucleotide Sequence	GTGCCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATTCTCCTGCAAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGTGTCTGTGTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:123737378\|123740001	FUS	0	1	0
chr3:123737378\|123740001	SF3B4	1	0	0
chr3:123737378\|123740001	FAM120A	0	0	1
chr3:123737378\|123740001	PRPF8	0	2	1
chr3:123737378\|123740001	TAF15	0	1	0
chr3:123737378\|123740001	FMR1	0	1	0
chr3:123737378\|123740001	SRSF1	0	0	3
chr3:123737378\|123740001	U2AF1	0	1	2
chr3:123737378\|123740001	U2AF2	1	0	1
chr3:123737378\|123740001	SRSF9	0	0	1
chr3:123737378\|123740001	PCBP2	0	1	0
chr3:123737378\|123740001	SF3A3	1	0	0
chr3:123737378\|123740001	HNRNPC	0	3	0
chr3:123737378\|123740001	ZNF184	0	0	1
chr3:123737378\|123740001	LIN28B	0	0	1
chr3:123737378\|123740001	SND1	0	0	1
chr3:123737378\|123740001	IGF2BP1	0	0	2
chr3:123737378\|123740001	IGF2BP3	0	0	1
chr3:123737378\|123740001	IGF2BP2	0	1	4
chr3:123737378\|123740001	TARDBP	1	0	0
chr3:123737378\|123740001	BUD13	0	2	9
chr3:123737378\|123740001	RBFOX2	0	2	0
chr3:123737378\|123740001	SLTM	0	1	0
chr3:123737378\|123740001	DKC1	1	0	0
chr3:123737378\|123740001	EIF4A3	1	2	4

CircRNA Information