CircRNA Information

General Information
circRNA Basic Information
CircID chr3:124970490|124970645
Strand -
CircType exon
Host Gene ENSG00000173706.11;
Algorism CIRI2;
Sequence CTGTCTCCTCCACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATGAGTCCCTCTCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:124970490|124970645 hsa-miR-31-5p 0 0 1
chr3:124970490|124970645 hsa-miR-31-3p 0 0 1
chr3:124970490|124970645 hsa-miR-575 0 0 1
chr3:124970490|124970645 hsa-miR-604 0 0 1
chr3:124970490|124970645 hsa-miR-765 0 0 1
chr3:124970490|124970645 hsa-miR-744-5p 0 0 1
chr3:124970490|124970645 hsa-miR-744-3p 0 0 1
chr3:124970490|124970645 hsa-miR-665 1 1 1
chr3:124970490|124970645 hsa-miR-485-5p 0 1 1
chr3:124970490|124970645 hsa-miR-767-3p 0 0 1
chr3:124970490|124970645 hsa-miR-140-3p 0 1 1
chr3:124970490|124970645 hsa-miR-128 0 0 1
chr3:124970490|124970645 hsa-miR-1268 0 0 1
chr3:124970490|124970645 hsa-miR-588 0 1 0
chr3:124970490|124970645 hsa-miR-650 1 0 0
chr3:124970490|124970645 hsa-miR-663a 1 0 0
chr3:124970490|124970645 hsa-miR-762 1 0 0
chr3:124970490|124970645 hsa-miR-1268a 1 0 0
chr3:124970490|124970645 hsa-miR-3197 1 0 0
chr3:124970490|124970645 hsa-miR-4298 1 0 0
chr3:124970490|124970645 hsa-miR-4270 1 0 0
chr3:124970490|124970645 hsa-miR-3621 1 0 0
chr3:124970490|124970645 hsa-miR-3921 0 1 0
chr3:124970490|124970645 hsa-miR-3937 1 0 0
chr3:124970490|124970645 hsa-miR-1268b 1 1 0
chr3:124970490|124970645 hsa-miR-4476 1 0 0
chr3:124970490|124970645 hsa-miR-4510 1 0 0
chr3:124970490|124970645 hsa-miR-4514 1 0 0
chr3:124970490|124970645 hsa-miR-4656 1 0 0
chr3:124970490|124970645 hsa-miR-4673 1 0 0
chr3:124970490|124970645 hsa-miR-4706 1 0 0
chr3:124970490|124970645 hsa-miR-4739 1 0 0
chr3:124970490|124970645 hsa-miR-5090 1 0 0
chr3:124970490|124970645 hsa-miR-5092 1 0 0
chr3:124970490|124970645 hsa-miR-5691 0 1 0
chr3:124970490|124970645 hsa-miR-6090 1 0 0
chr3:124970490|124970645 hsa-miR-6127 1 0 0
chr3:124970490|124970645 hsa-miR-6133 1 0 0
chr3:124970490|124970645 hsa-miR-6165 1 1 0
chr3:124970490|124970645 hsa-miR-7150 1 0 0
chr3:124970490|124970645 hsa-miR-8077 0 1 0
chr3:124970490|124970645 hsa-miR-8085 1 0 0
chr3:124970490|124970645 hsa-miR-12115 0 1 0
chr3:124970490|124970645 hsa-miR-211-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6840-3p 0 1 0
chr3:124970490|124970645 hsa-miR-6747-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6809-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4433a-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6894-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6510-5p 1 0 0
chr3:124970490|124970645 hsa-miR-1236-5p 1 0 0
chr3:124970490|124970645 hsa-miR-5187-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6807-5p 0 1 0
chr3:124970490|124970645 hsa-miR-4695-5p 1 1 0
chr3:124970490|124970645 hsa-miR-4722-5p 1 1 0
chr3:124970490|124970645 hsa-miR-593-5p 1 0 0
chr3:124970490|124970645 hsa-miR-197-5p 1 0 0
chr3:124970490|124970645 hsa-miR-191-3p 0 1 0
chr3:124970490|124970645 hsa-miR-7845-5p 1 1 0
chr3:124970490|124970645 hsa-miR-3180-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6827-5p 1 1 0
chr3:124970490|124970645 hsa-miR-6798-5p 1 0 0
chr3:124970490|124970645 hsa-miR-3126-5p 1 1 0
chr3:124970490|124970645 hsa-miR-3130-3p 0 1 0
chr3:124970490|124970645 hsa-miR-6810-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4640-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6771-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4690-5p 1 0 0
chr3:124970490|124970645 hsa-miR-92b-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6749-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6847-5p 0 1 0
chr3:124970490|124970645 hsa-miR-6834-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6861-3p 0 1 0
chr3:124970490|124970645 hsa-miR-149-3p 1 0 0
chr3:124970490|124970645 hsa-miR-423-5p 1 0 0
chr3:124970490|124970645 hsa-miR-214-3p 0 1 0
chr3:124970490|124970645 hsa-miR-6792-5p 1 0 0
chr3:124970490|124970645 hsa-miR-1207-5p 1 0 0
chr3:124970490|124970645 hsa-miR-1233-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4763-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6778-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6865-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6775-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6726-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6743-5p 1 1 0
chr3:124970490|124970645 hsa-miR-6752-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6815-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6851-5p 1 0 0
chr3:124970490|124970645 hsa-miR-7110-5p 1 0 0
chr3:124970490|124970645 hsa-miR-11181-3p 1 0 0
chr3:124970490|124970645 hsa-miR-1249-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6763-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6797-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6808-5p 1 1 0
chr3:124970490|124970645 hsa-miR-6875-5p 1 1 0
chr3:124970490|124970645 hsa-miR-6862-5p 1 1 0
chr3:124970490|124970645 hsa-miR-10396a-5p 1 0 0
chr3:124970490|124970645 hsa-miR-10396b-5p 1 0 0
chr3:124970490|124970645 hsa-miR-328-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4649-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4745-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4749-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6729-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6738-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6777-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6794-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6848-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6858-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4758-5p 1 1 0
chr3:124970490|124970645 hsa-miR-6511a-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6511b-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6731-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6758-5p 1 0 0
chr3:124970490|124970645 hsa-miR-6856-5p 0 1 0
chr3:124970490|124970645 hsa-miR-4665-5p 1 0 0
chr3:124970490|124970645 hsa-miR-3173-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6876-5p 1 1 0
chr3:124970490|124970645 hsa-miR-4716-3p 1 0 0
chr3:124970490|124970645 hsa-miR-6790-5p 1 0 0
chr3:124970490|124970645 hsa-miR-4756-5p 1 1 0
chr3:124970490|124970645 hsa-miR-1912-5p 0 1 0
chr3:124970490|124970645 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:124970490|124970645
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence LSPPLWSRPACLSLFLLATQRGSRQILGAASWCGPLSRGPR
Nucleotide Sequence CTGTCTCCTCCACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGA
CircID chr3:124970490|124970645
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MPVPLPACHSAWLPTNPGRSLLVRSSEQRSQVTGSEQ
Nucleotide Sequence ATGCCTGTCCCTCTTCCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATGA
CircID chr3:124970490|124970645
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MSQSPGTSAQRTAPGGCAQDLSGATLSGKQEEGQACGA
Nucleotide Sequence CTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGA
CircID chr3:124970490|124970645
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MRPGFVGSHAEWQAGRGTGMRGVTTVEET
Nucleotide Sequence CTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAGACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab