CircNet

General Information

circRNA Basic Information

CircID	chr3:128070888\|128071076
Strand	-
CircType	exon
Host Gene	ENSG00000058262.8;
Algorism	CIRI2;
Sequence	AGGCACTGCCCAGCAGCAAGGGCAGCAGAGTTGGGTGCTAAGATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGGATGCCCTGATCCTAAGAAGGGGGCCTGGGGGTGCGTGCAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCACACGGCAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:128070888\|128071076	hsa-miR-29a-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-29a-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-34a-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-34a-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-29c-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-29c-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-133b	1	0	1
chr3:128070888\|128071076	hsa-miR-449a	0	0	1
chr3:128070888\|128071076	hsa-miR-519e-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-519e-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-612	0	1	1
chr3:128070888\|128071076	hsa-miR-651-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-651-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-449b-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-449b-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-938	0	0	1
chr3:128070888\|128071076	hsa-miR-1248	0	1	1
chr3:128070888\|128071076	hsa-miR-615-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-361-3p	0	1	1
chr3:128070888\|128071076	hsa-miR-1224-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-362-5p	0	1	1
chr3:128070888\|128071076	hsa-miR-515-3p	0	0	1
chr3:128070888\|128071076	hsa-miR-34c-5p	0	0	1
chr3:128070888\|128071076	hsa-miR-1260	0	0	1
chr3:128070888\|128071076	hsa-miR-1280	0	0	1
chr3:128070888\|128071076	hsa-miR-1285	0	0	1
chr3:128070888\|128071076	hsa-miR-133a	0	0	1
chr3:128070888\|128071076	hsa-miR-29b	0	0	1
chr3:128070888\|128071076	hsa-miR-647	0	1	0
chr3:128070888\|128071076	hsa-miR-4313	1	0	0
chr3:128070888\|128071076	hsa-miR-3943	1	0	0
chr3:128070888\|128071076	hsa-miR-4686	0	1	0
chr3:128070888\|128071076	hsa-miR-6071	0	1	0
chr3:128070888\|128071076	hsa-miR-6860	0	1	0
chr3:128070888\|128071076	hsa-miR-18a-3p	0	1	0
chr3:128070888\|128071076	hsa-miR-3194-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-4726-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-3692-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-769-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-6840-5p	1	0	0
chr3:128070888\|128071076	hsa-miR-6762-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-4713-5p	1	0	0
chr3:128070888\|128071076	hsa-miR-4793-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-6763-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-3127-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-4783-5p	1	0	0
chr3:128070888\|128071076	hsa-miR-324-5p	1	0	0
chr3:128070888\|128071076	hsa-miR-1306-5p	1	0	0
chr3:128070888\|128071076	hsa-miR-6871-3p	0	1	0
chr3:128070888\|128071076	hsa-miR-4749-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-1292-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-1296-3p	0	1	0
chr3:128070888\|128071076	hsa-miR-6798-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-4772-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-199b-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-133a-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-4650-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-3127-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-4745-5p	1	1	0
chr3:128070888\|128071076	hsa-miR-1266-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-10396a-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-10396b-3p	1	0	0
chr3:128070888\|128071076	hsa-miR-3150b-5p	0	1	0
chr3:128070888\|128071076	hsa-miR-3150a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:128070888\|128071076
ORF Type	ORF1
Protein Length	46
Nucleotide Length	141
Protein Sequence	MGAKILRSSRFRAGFRHWWDQGCFAGCPDPKKGAWGCVQPVGETPL
Nucleotide Sequence	TTGGGTGCTAAGATCCTGAGGAGCTCGAGGTTTCGAGCTGGCTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGGATGCCCTGATCCTAAGAAGGGGGCCTGGGGGTGCGTGCAGCCTGTCGGGGAGACCCCACTCTGA

CircID	chr3:128070888\|128071076
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MALDIGGTKDVLQDALILRRGPGGACSLSGRPHSDSGHTA
Nucleotide Sequence	CTGGCTTTAGACATTGGTGGGACCAAGGATGTTTTGCAGGATGCCCTGATCCTAAGAAGGGGGCCTGGGGGTGCGTGCAGCCTGTCGGGGAGACCCCACTCTGACAGTGGGCACACGGCA

CircID	chr3:128070888\|128071076
ORF Type	ORF3
Protein Length	58
Nucleotide Length	174
Protein Sequence	MSEWGLPDRLHAPPGPLLRIRASCKTSLVPPMSKASSKPRAPQDLSTQLCCPCCWAVP
Nucleotide Sequence	CTGTCAGAGTGGGGTCTCCCCGACAGGCTGCACGCACCCCCAGGCCCCCTTCTTAGGATCAGGGCATCCTGCAAAACATCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTGCCCTTGCTGCTGGGCAGTGCCT

CircID	chr3:128070888\|128071076
ORF Type	ORF4
Protein Length	62
Nucleotide Length	186
Protein Sequence	LPCAHCQSGVSPTGCTHPQAPFLGSGHPAKHPWSHQCLKPARNLELLRILAPNSAALAAGQC
Nucleotide Sequence	CTGCCGTGTGCCCACTGTCAGAGTGGGGTCTCCCCGACAGGCTGCACGCACCCCCAGGCCCCCTTCTTAGGATCAGGGCATCCTGCAAAACATCCTTGGTCCCACCAATGTCTAAAGCCAGCTCGAAACCTCGAGCTCCTCAGGATCTTAGCACCCAACTCTGCTGCCCTTGCTGCTGGGCAGTGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information