CircRNA Information

General Information
circRNA Basic Information
CircID chr3:129277352|129277600
Strand -
CircType exon
Host Gene ENSG00000181789.13;
Algorism CIRI2;
Sequence AGTGACAATGCAGGTGACAGCCAGAAGTTTGGAGGAGCTGCCAGTAGACATCATCTTGGCATCTGTGGGATAAGAGGCCAGCCTGCATAGGACCTCATACCCTTCCCCAACACTACCTGGAAGTTGTGCCTTCCTCATGAAACTGGCAGAAACCCCTTCCCAAGCTTCTGTATTGAAAAACAATTAGGAATCATTGCAGATTTTTTTTTATTCTGCTCCCACCTCCCACCCGGGACTACTTGCTGGTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:129277352|129277600 hsa-miR-33a-5p 0 0 1
chr3:129277352|129277600 hsa-miR-33a-3p 0 0 1
chr3:129277352|129277600 hsa-miR-149-5p 0 0 1
chr3:129277352|129277600 hsa-miR-149-3p 0 0 1
chr3:129277352|129277600 hsa-miR-196b-5p 0 0 1
chr3:129277352|129277600 hsa-miR-196b-3p 0 0 1
chr3:129277352|129277600 hsa-miR-433-5p 0 0 1
chr3:129277352|129277600 hsa-miR-433-3p 0 0 1
chr3:129277352|129277600 hsa-miR-193b-5p 0 0 1
chr3:129277352|129277600 hsa-miR-193b-3p 0 0 1
chr3:129277352|129277600 hsa-miR-506-5p 0 0 1
chr3:129277352|129277600 hsa-miR-506-3p 0 0 1
chr3:129277352|129277600 hsa-miR-33b-5p 0 0 1
chr3:129277352|129277600 hsa-miR-33b-3p 0 0 1
chr3:129277352|129277600 hsa-miR-634 0 0 1
chr3:129277352|129277600 hsa-miR-668-5p 0 0 1
chr3:129277352|129277600 hsa-miR-668-3p 0 0 1
chr3:129277352|129277600 hsa-miR-892b 0 0 1
chr3:129277352|129277600 hsa-miR-920 1 0 1
chr3:129277352|129277600 hsa-miR-934 0 0 1
chr3:129277352|129277600 hsa-miR-1226-5p 0 0 1
chr3:129277352|129277600 hsa-miR-1226-3p 0 0 1
chr3:129277352|129277600 hsa-miR-1305 0 0 1
chr3:129277352|129277600 hsa-miR-885-3p 0 0 1
chr3:129277352|129277600 hsa-miR-188-3p 0 1 1
chr3:129277352|129277600 hsa-miR-193a-3p 0 0 1
chr3:129277352|129277600 hsa-miR-142-3p 0 0 1
chr3:129277352|129277600 hsa-miR-548c-3p 0 0 1
chr3:129277352|129277600 hsa-miR-124 0 0 1
chr3:129277352|129277600 hsa-miR-544 0 0 1
chr3:129277352|129277600 hsa-miR-196a 0 0 1
chr3:129277352|129277600 hsa-miR-637 1 0 0
chr3:129277352|129277600 hsa-miR-658 1 0 0
chr3:129277352|129277600 hsa-miR-298 1 0 0
chr3:129277352|129277600 hsa-miR-4268 0 1 0
chr3:129277352|129277600 hsa-miR-4281 1 0 0
chr3:129277352|129277600 hsa-miR-3936 0 1 0
chr3:129277352|129277600 hsa-miR-3689c 0 1 0
chr3:129277352|129277600 hsa-miR-4525 1 0 0
chr3:129277352|129277600 hsa-miR-4651 1 0 0
chr3:129277352|129277600 hsa-miR-4654 1 0 0
chr3:129277352|129277600 hsa-miR-5572 1 0 0
chr3:129277352|129277600 hsa-miR-5683 0 1 0
chr3:129277352|129277600 hsa-miR-5697 0 1 0
chr3:129277352|129277600 hsa-miR-6765-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6825-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6857-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6799-5p 1 1 0
chr3:129277352|129277600 hsa-miR-3192-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6842-3p 0 1 0
chr3:129277352|129277600 hsa-miR-6776-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6732-5p 1 0 0
chr3:129277352|129277600 hsa-miR-23a-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6770-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6782-5p 1 0 0
chr3:129277352|129277600 hsa-miR-30b-3p 1 1 0
chr3:129277352|129277600 hsa-miR-3944-3p 1 0 0
chr3:129277352|129277600 hsa-miR-1229-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6771-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6878-3p 0 1 0
chr3:129277352|129277600 hsa-miR-4787-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6736-3p 0 1 0
chr3:129277352|129277600 hsa-miR-4750-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4727-5p 0 1 0
chr3:129277352|129277600 hsa-miR-1233-5p 1 1 0
chr3:129277352|129277600 hsa-miR-1273h-5p 1 1 0
chr3:129277352|129277600 hsa-miR-3689b-3p 0 1 0
chr3:129277352|129277600 hsa-miR-4763-3p 1 0 0
chr3:129277352|129277600 hsa-miR-6769b-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6778-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6787-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6816-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6870-5p 1 0 0
chr3:129277352|129277600 hsa-miR-1343-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6726-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6752-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6756-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6769a-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6803-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6819-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6851-5p 0 1 0
chr3:129277352|129277600 hsa-miR-7110-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6751-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6779-5p 1 0 0
chr3:129277352|129277600 hsa-miR-7111-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4728-5p 1 0 0
chr3:129277352|129277600 hsa-miR-5196-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6780b-5p 1 1 0
chr3:129277352|129277600 hsa-miR-3689a-3p 0 1 0
chr3:129277352|129277600 hsa-miR-4649-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4725-3p 1 1 0
chr3:129277352|129277600 hsa-miR-6846-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6858-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6883-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4758-5p 1 0 0
chr3:129277352|129277600 hsa-miR-6511a-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4747-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6766-5p 1 1 0
chr3:129277352|129277600 hsa-miR-6724-5p 1 0 0
chr3:129277352|129277600 hsa-miR-4757-5p 0 1 0
chr3:129277352|129277600 hsa-miR-6792-3p 0 1 0
chr3:129277352|129277600 hsa-miR-4691-5p 0 1 0
chr3:129277352|129277600 hsa-miR-6781-3p 0 1 0
chr3:129277352|129277600 hsa-miR-6504-5p 0 1 0
chr3:129277352|129277600 hsa-miR-450a-5p 0 1 0
chr3:129277352|129277600 hsa-miR-5582-5p 0 1 0
chr3:129277352|129277600 hsa-miR-202-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:129277352|129277600
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MCLPHETGRNPFPSFCIEKQLGIIADFFLFCSHLPPGTTCW
Nucleotide Sequence TTGTGCCTTCCTCATGAAACTGGCAGAAACCCCTTCCCAAGCTTCTGTATTGAAAAACAATTAGGAATCATTGCAGATTTTTTTTTATTCTGCTCCCACCTCCCACCCGGGACTACTTGCTGGTGA

CircID chr3:129277352|129277600
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MHRTSYPSPTLPGSCAFLMKLAETPSQASVLKNN
Nucleotide Sequence CTGCATAGGACCTCATACCCTTCCCCAACACTACCTGGAAGTTGTGCCTTCCTCATGAAACTGGCAGAAACCCCTTCCCAAGCTTCTGTATTGAAAAACAATTAG

CircID chr3:129277352|129277600
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MWDKRPACIGPHTLPQHYLEVVPSS
Nucleotide Sequence CTGTGGGATAAGAGGCCAGCCTGCATAGGACCTCATACCCTTCCCCAACACTACCTGGAAGTTGTGCCTTCCTCATGA

CircID chr3:129277352|129277600
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MFFNTEAWEGVSASFMRKAQLPGSVGEGYEVLCRLASYPTDAKMMSTGSSSKLLAVTCIVT
Nucleotide Sequence TTGTTTTTCAATACAGAAGCTTGGGAAGGGGTTTCTGCCAGTTTCATGAGGAAGGCACAACTTCCAGGTAGTGTTGGGGAAGGGTATGAGGTCCTATGCAGGCTGGCCTCTTATCCCACAGATGCCAAGATGATGTCTACTGGCAGCTCCTCCAAACTTCTGGCTGTCACCTGCATTGTCACT

CircID chr3:129277352|129277600
ORF Type ORF5
Protein Length 29
Nucleotide Length 87
Protein Sequence MQAGLLSHRCQDDVYWQLLQTSGCHLHCH
Nucleotide Sequence ATGCAGGCTGGCCTCTTATCCCACAGATGCCAAGATGATGTCTACTGGCAGCTCCTCCAAACTTCTGGCTGTCACCTGCATTGTCAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites