CircRNA Information

General Information
circRNA Basic Information
CircID chr3:129555914|129556128
Strand +
CircType exon
Host Gene ENSG00000004399.11;
Algorism CIRI2;
Sequence CTCCATCCCCTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:129555914|129556128 hsa-miR-148a-5p 0 0 1
chr3:129555914|129556128 hsa-miR-148a-3p 0 0 1
chr3:129555914|129556128 hsa-miR-214-5p 0 0 1
chr3:129555914|129556128 hsa-miR-214-3p 0 0 1
chr3:129555914|129556128 hsa-miR-152-5p 0 0 1
chr3:129555914|129556128 hsa-miR-152-3p 0 0 1
chr3:129555914|129556128 hsa-miR-326 0 0 1
chr3:129555914|129556128 hsa-miR-148b-5p 0 0 1
chr3:129555914|129556128 hsa-miR-148b-3p 0 0 1
chr3:129555914|129556128 hsa-miR-552-5p 0 0 1
chr3:129555914|129556128 hsa-miR-552-3p 0 0 1
chr3:129555914|129556128 hsa-miR-612 1 1 1
chr3:129555914|129556128 hsa-miR-625-5p 0 0 1
chr3:129555914|129556128 hsa-miR-625-3p 0 0 1
chr3:129555914|129556128 hsa-miR-636 0 1 1
chr3:129555914|129556128 hsa-miR-637 0 0 1
chr3:129555914|129556128 hsa-miR-541-5p 0 0 1
chr3:129555914|129556128 hsa-miR-541-3p 0 0 1
chr3:129555914|129556128 hsa-miR-939-5p 0 0 1
chr3:129555914|129556128 hsa-miR-939-3p 0 0 1
chr3:129555914|129556128 hsa-miR-1286 0 1 1
chr3:129555914|129556128 hsa-miR-1293 0 0 1
chr3:129555914|129556128 hsa-miR-1275 0 0 1
chr3:129555914|129556128 hsa-miR-885-3p 1 1 1
chr3:129555914|129556128 hsa-miR-1184 0 1 1
chr3:129555914|129556128 hsa-miR-654-5p 0 1 1
chr3:129555914|129556128 hsa-miR-361-3p 0 1 1
chr3:129555914|129556128 hsa-miR-330-5p 0 0 1
chr3:129555914|129556128 hsa-miR-128 0 0 1
chr3:129555914|129556128 hsa-miR-1285 0 0 1
chr3:129555914|129556128 hsa-miR-218 0 0 1
chr3:129555914|129556128 hsa-miR-1254 0 0 1
chr3:129555914|129556128 hsa-miR-663a 1 0 0
chr3:129555914|129556128 hsa-miR-762 1 1 0
chr3:129555914|129556128 hsa-miR-2113 0 1 0
chr3:129555914|129556128 hsa-miR-761 0 1 0
chr3:129555914|129556128 hsa-miR-1268a 1 0 0
chr3:129555914|129556128 hsa-miR-3132 1 0 0
chr3:129555914|129556128 hsa-miR-3147 1 0 0
chr3:129555914|129556128 hsa-miR-378c 1 0 0
chr3:129555914|129556128 hsa-miR-4298 1 0 0
chr3:129555914|129556128 hsa-miR-4267 0 1 0
chr3:129555914|129556128 hsa-miR-1268b 1 0 0
chr3:129555914|129556128 hsa-miR-4456 0 1 0
chr3:129555914|129556128 hsa-miR-4463 1 0 0
chr3:129555914|129556128 hsa-miR-4489 1 0 0
chr3:129555914|129556128 hsa-miR-4499 1 0 0
chr3:129555914|129556128 hsa-miR-4507 1 0 0
chr3:129555914|129556128 hsa-miR-4530 1 0 0
chr3:129555914|129556128 hsa-miR-1587 1 1 0
chr3:129555914|129556128 hsa-miR-4538 1 0 0
chr3:129555914|129556128 hsa-miR-4651 1 0 0
chr3:129555914|129556128 hsa-miR-4656 1 0 0
chr3:129555914|129556128 hsa-miR-4730 1 0 0
chr3:129555914|129556128 hsa-miR-4741 1 0 0
chr3:129555914|129556128 hsa-miR-5087 0 1 0
chr3:129555914|129556128 hsa-miR-5193 0 1 0
chr3:129555914|129556128 hsa-miR-5698 1 0 0
chr3:129555914|129556128 hsa-miR-5787 1 0 0
chr3:129555914|129556128 hsa-miR-6081 1 0 0
chr3:129555914|129556128 hsa-miR-6090 1 0 0
chr3:129555914|129556128 hsa-miR-6127 1 0 0
chr3:129555914|129556128 hsa-miR-6860 0 1 0
chr3:129555914|129556128 hsa-miR-7974 1 0 0
chr3:129555914|129556128 hsa-miR-8052 1 0 0
chr3:129555914|129556128 hsa-miR-8089 1 1 0
chr3:129555914|129556128 hsa-miR-12115 1 0 0
chr3:129555914|129556128 hsa-miR-6861-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6894-5p 1 0 0
chr3:129555914|129556128 hsa-miR-3622a-5p 1 0 0
chr3:129555914|129556128 hsa-miR-7114-5p 1 0 0
chr3:129555914|129556128 hsa-miR-4722-5p 1 0 0
chr3:129555914|129556128 hsa-miR-3064-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6741-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6727-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6759-5p 1 0 0
chr3:129555914|129556128 hsa-miR-197-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6776-5p 1 0 0
chr3:129555914|129556128 hsa-miR-7845-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6817-3p 0 1 0
chr3:129555914|129556128 hsa-miR-3151-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6748-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6793-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6796-5p 1 0 0
chr3:129555914|129556128 hsa-miR-877-3p 0 1 0
chr3:129555914|129556128 hsa-miR-6732-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6827-5p 0 1 0
chr3:129555914|129556128 hsa-miR-6810-5p 0 1 0
chr3:129555914|129556128 hsa-miR-30b-3p 0 1 0
chr3:129555914|129556128 hsa-miR-6882-3p 1 0 0
chr3:129555914|129556128 hsa-miR-3944-3p 0 1 0
chr3:129555914|129556128 hsa-miR-1229-5p 1 0 0
chr3:129555914|129556128 hsa-miR-1908-3p 1 0 0
chr3:129555914|129556128 hsa-miR-1228-5p 1 0 0
chr3:129555914|129556128 hsa-miR-3191-5p 0 1 0
chr3:129555914|129556128 hsa-miR-6878-3p 0 1 0
chr3:129555914|129556128 hsa-miR-7111-3p 0 1 0
chr3:129555914|129556128 hsa-miR-6802-5p 0 1 0
chr3:129555914|129556128 hsa-miR-7156-3p 0 1 0
chr3:129555914|129556128 hsa-miR-4740-5p 1 0 0
chr3:129555914|129556128 hsa-miR-1225-5p 1 0 0
chr3:129555914|129556128 hsa-miR-873-3p 0 1 0
chr3:129555914|129556128 hsa-miR-6770-3p 0 1 0
chr3:129555914|129556128 hsa-miR-2277-5p 1 0 0
chr3:129555914|129556128 hsa-miR-3126-3p 0 1 0
chr3:129555914|129556128 hsa-miR-10400-5p 1 0 0
chr3:129555914|129556128 hsa-miR-1233-5p 1 1 0
chr3:129555914|129556128 hsa-miR-4763-3p 1 0 0
chr3:129555914|129556128 hsa-miR-6769b-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6778-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6893-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6775-5p 1 0 0
chr3:129555914|129556128 hsa-miR-1343-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6743-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6756-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6769a-5p 1 0 0
chr3:129555914|129556128 hsa-miR-1249-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6751-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6763-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6779-5p 0 1 0
chr3:129555914|129556128 hsa-miR-7111-5p 1 0 0
chr3:129555914|129556128 hsa-miR-320a-5p 0 1 0
chr3:129555914|129556128 hsa-miR-3620-5p 1 1 0
chr3:129555914|129556128 hsa-miR-4728-5p 0 1 0
chr3:129555914|129556128 hsa-miR-5189-5p 1 1 0
chr3:129555914|129556128 hsa-miR-5196-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6836-5p 1 0 0
chr3:129555914|129556128 hsa-miR-328-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6735-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6795-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6846-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6883-5p 0 1 0
chr3:129555914|129556128 hsa-miR-3187-5p 0 1 0
chr3:129555914|129556128 hsa-miR-4723-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6885-5p 1 0 0
chr3:129555914|129556128 hsa-miR-6511b-5p 1 1 0
chr3:129555914|129556128 hsa-miR-7843-5p 1 0 0
chr3:129555914|129556128 hsa-miR-4665-5p 1 1 0
chr3:129555914|129556128 hsa-miR-6791-3p 0 1 0
chr3:129555914|129556128 hsa-miR-6766-5p 0 1 0
chr3:129555914|129556128 hsa-miR-6785-5p 0 1 0
chr3:129555914|129556128 hsa-miR-4667-5p 0 1 0
chr3:129555914|129556128 hsa-miR-3184-5p 1 0 0
chr3:129555914|129556128 hsa-miR-4723-3p 0 1 0
chr3:129555914|129556128 hsa-miR-3619-5p 0 1 0
chr3:129555914|129556128 hsa-miR-6764-5p 0 1 0
chr3:129555914|129556128 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:129555914|129556128
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MEARELVRLPHLPSTACTVPTHLLHNVQLVLLPRAPCIQAAKHKLGERRPPARRLQPR
Nucleotide Sequence ATGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGA
CircID chr3:129555914|129556128
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MSPDQSLGWRPESWSGSPICPARPALCPPTCSTTSSWSCCQEPRASRRPSTNWGRGGRQPGGCSPE
Nucleotide Sequence CTGTCCCCAGATCAGTCTCTGGGATGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAA
CircID chr3:129555914|129556128
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MHCAHPLAPQRPVGPAAKSPVHPGGQAQTGGEEAASPEAAAQK
Nucleotide Sequence CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAAA
CircID chr3:129555914|129556128
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MGCSLRAGGLLSPSLCLAAWMHGALGSRTNWTLWSKWVGTVQAVLGRWGSLTSSLASIPETDLGTGGRGW
Nucleotide Sequence CTGGGCTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGGGGAGCCTGACCAGCTCTCTGGCCTCCATCCCAGAGACTGATCTGGGGACAGGTGGGAGGGGATGG
CircID chr3:129555914|129556128
ORF Type ORF5
Protein Length 44
Nucleotide Length 135
Protein Sequence MAASSPPVCAWPPGCTGLLAAGPTGRCGASGWAQCRPCWADGGA
Nucleotide Sequence CTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGGGGAGCCTGA
CircID chr3:129555914|129556128
ORF Type ORF6
Protein Length 59
Nucleotide Length 180
Protein Sequence MQPPGWRPPLPQFVLGRLDARGSWQQDQLDVVEQVGGHSAGRAGQMGEPDQLSGLHPRD
Nucleotide Sequence CTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGGGGAGCCTGACCAGCTCTCTGGCCTCCATCCCAGAGACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab