CircRNA Information

General Information
circRNA Basic Information
CircID chr3:129560372|129561664
Strand -
CircType exon
Host Gene ENSG00000004399.11;
Algorism CIRI2;
Sequence CTTCTTGCGATGGCTCTGCCGGTGAGACTTCTTGGGCTCCGCCAGCTCGTCCGTAGGCAGCACCTGGGAGGCCGGGCAGTGGTCAGTGTCCGCACCAGGCCCCATCCTCGGCCGCCTGTGGGAGGTCTGGCTCTGCCATGCTTCTTAGCACACAAGGGCTGTGGTTCCCTCCTGATTCTGGGCCCCATCCCTACTCCCCCACCCCCCAGCCTTTCGCAGGGCTGGGAGCACTTTTCCCAAGAGGCCCAGGGCCACAGAAAGCCAAGGCCACACCCACTGAGGGGCTGGATCCCCCGGGGCCGAGGTTGGGCACTCACCAAATGGAAATACTTCTCTGTGTCCAAGTCTTTCACTCGGCCCAGTGTGTTGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:129560372|129561664 hsa-miR-17-5p 0 0 1
chr3:129560372|129561664 hsa-miR-17-3p 0 0 1
chr3:129560372|129561664 hsa-miR-20a-5p 0 0 1
chr3:129560372|129561664 hsa-miR-20a-3p 0 0 1
chr3:129560372|129561664 hsa-miR-93-5p 0 0 1
chr3:129560372|129561664 hsa-miR-93-3p 0 0 1
chr3:129560372|129561664 hsa-miR-106a-5p 0 0 1
chr3:129560372|129561664 hsa-miR-106a-3p 0 0 1
chr3:129560372|129561664 hsa-miR-106b-5p 0 0 1
chr3:129560372|129561664 hsa-miR-106b-3p 0 0 1
chr3:129560372|129561664 hsa-miR-302a-5p 0 0 1
chr3:129560372|129561664 hsa-miR-302a-3p 0 0 1
chr3:129560372|129561664 hsa-miR-302b-5p 0 0 1
chr3:129560372|129561664 hsa-miR-302b-3p 0 0 1
chr3:129560372|129561664 hsa-miR-302c-5p 0 0 1
chr3:129560372|129561664 hsa-miR-302c-3p 0 0 1
chr3:129560372|129561664 hsa-miR-302d-5p 0 0 1
chr3:129560372|129561664 hsa-miR-302d-3p 0 0 1
chr3:129560372|129561664 hsa-miR-372-5p 0 0 1
chr3:129560372|129561664 hsa-miR-372-3p 0 0 1
chr3:129560372|129561664 hsa-miR-373-5p 0 0 1
chr3:129560372|129561664 hsa-miR-373-3p 0 0 1
chr3:129560372|129561664 hsa-miR-328-5p 0 0 1
chr3:129560372|129561664 hsa-miR-328-3p 0 0 1
chr3:129560372|129561664 hsa-miR-20b-5p 0 0 1
chr3:129560372|129561664 hsa-miR-20b-3p 0 0 1
chr3:129560372|129561664 hsa-miR-520e-5p 0 0 1
chr3:129560372|129561664 hsa-miR-520e-3p 0 0 1
chr3:129560372|129561664 hsa-miR-520b-5p 0 0 1
chr3:129560372|129561664 hsa-miR-520b-3p 0 0 1
chr3:129560372|129561664 hsa-miR-519d-5p 0 0 1
chr3:129560372|129561664 hsa-miR-519d-3p 0 0 1
chr3:129560372|129561664 hsa-miR-581 0 0 1
chr3:129560372|129561664 hsa-miR-587 0 0 1
chr3:129560372|129561664 hsa-miR-603 0 0 1
chr3:129560372|129561664 hsa-miR-608 1 1 1
chr3:129560372|129561664 hsa-miR-609 0 0 1
chr3:129560372|129561664 hsa-miR-625-5p 0 0 1
chr3:129560372|129561664 hsa-miR-625-3p 0 0 1
chr3:129560372|129561664 hsa-miR-635 0 0 1
chr3:129560372|129561664 hsa-miR-637 0 1 1
chr3:129560372|129561664 hsa-miR-675-5p 0 0 1
chr3:129560372|129561664 hsa-miR-675-3p 0 0 1
chr3:129560372|129561664 hsa-miR-890 0 0 1
chr3:129560372|129561664 hsa-miR-1229-5p 0 0 1
chr3:129560372|129561664 hsa-miR-1229-3p 0 0 1
chr3:129560372|129561664 hsa-miR-663b 1 0 1
chr3:129560372|129561664 hsa-miR-1291 0 0 1
chr3:129560372|129561664 hsa-miR-1275 0 1 1
chr3:129560372|129561664 hsa-miR-302e 0 1 1
chr3:129560372|129561664 hsa-miR-532-3p 0 1 1
chr3:129560372|129561664 hsa-miR-188-3p 0 0 1
chr3:129560372|129561664 hsa-miR-140-3p 0 0 1
chr3:129560372|129561664 hsa-miR-520d-3p 0 1 1
chr3:129560372|129561664 hsa-miR-520a-3p 0 1 1
chr3:129560372|129561664 hsa-miR-520c-3p 0 1 1
chr3:129560372|129561664 hsa-miR-644 0 0 1
chr3:129560372|129561664 hsa-miR-129-3p 0 0 1
chr3:129560372|129561664 hsa-miR-147 0 0 1
chr3:129560372|129561664 hsa-miR-638 1 0 0
chr3:129560372|129561664 hsa-miR-661 1 0 0
chr3:129560372|129561664 hsa-miR-663a 1 0 0
chr3:129560372|129561664 hsa-miR-762 1 1 0
chr3:129560372|129561664 hsa-miR-760 1 1 0
chr3:129560372|129561664 hsa-miR-1268a 1 0 0
chr3:129560372|129561664 hsa-miR-2861 1 1 0
chr3:129560372|129561664 hsa-miR-3132 1 0 0
chr3:129560372|129561664 hsa-miR-4292 1 1 0
chr3:129560372|129561664 hsa-miR-3937 1 1 0
chr3:129560372|129561664 hsa-miR-1268b 1 0 0
chr3:129560372|129561664 hsa-miR-4449 1 0 0
chr3:129560372|129561664 hsa-miR-4462 1 0 0
chr3:129560372|129561664 hsa-miR-4487 0 1 0
chr3:129560372|129561664 hsa-miR-2392 0 1 0
chr3:129560372|129561664 hsa-miR-4516 1 0 0
chr3:129560372|129561664 hsa-miR-1587 1 0 0
chr3:129560372|129561664 hsa-miR-4651 1 1 0
chr3:129560372|129561664 hsa-miR-4656 1 0 0
chr3:129560372|129561664 hsa-miR-4730 1 1 0
chr3:129560372|129561664 hsa-miR-4741 1 0 0
chr3:129560372|129561664 hsa-miR-4754 1 1 0
chr3:129560372|129561664 hsa-miR-4779 0 1 0
chr3:129560372|129561664 hsa-miR-4788 0 1 0
chr3:129560372|129561664 hsa-miR-5698 1 1 0
chr3:129560372|129561664 hsa-miR-5787 1 1 0
chr3:129560372|129561664 hsa-miR-6081 1 0 0
chr3:129560372|129561664 hsa-miR-6085 1 0 0
chr3:129560372|129561664 hsa-miR-6127 1 0 0
chr3:129560372|129561664 hsa-miR-8087 0 1 0
chr3:129560372|129561664 hsa-miR-8089 1 0 0
chr3:129560372|129561664 hsa-miR-135a-3p 1 0 0
chr3:129560372|129561664 hsa-miR-4433b-3p 1 0 0
chr3:129560372|129561664 hsa-miR-7155-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4726-3p 0 1 0
chr3:129560372|129561664 hsa-miR-6894-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6857-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6720-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6728-5p 1 0 0
chr3:129560372|129561664 hsa-miR-1227-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6089 1 0 0
chr3:129560372|129561664 hsa-miR-6757-5p 1 1 0
chr3:129560372|129561664 hsa-miR-6880-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6730-5p 1 1 0
chr3:129560372|129561664 hsa-miR-24-3p 0 1 0
chr3:129560372|129561664 hsa-miR-6806-5p 1 0 0
chr3:129560372|129561664 hsa-miR-181a-2-3p 0 1 0
chr3:129560372|129561664 hsa-miR-197-5p 1 0 0
chr3:129560372|129561664 hsa-miR-7108-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6742-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6716-5p 1 0 0
chr3:129560372|129561664 hsa-miR-3151-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6772-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6732-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6782-5p 1 1 0
chr3:129560372|129561664 hsa-miR-7855-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6850-5p 1 1 0
chr3:129560372|129561664 hsa-miR-6882-3p 1 0 0
chr3:129560372|129561664 hsa-miR-6786-5p 1 0 0
chr3:129560372|129561664 hsa-miR-939-3p 1 1 0
chr3:129560372|129561664 hsa-miR-7109-5p 1 0 0
chr3:129560372|129561664 hsa-miR-1909-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6771-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4713-3p 1 1 0
chr3:129560372|129561664 hsa-miR-4787-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4638-3p 1 0 0
chr3:129560372|129561664 hsa-miR-6824-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6877-5p 0 1 0
chr3:129560372|129561664 hsa-miR-3189-3p 0 1 0
chr3:129560372|129561664 hsa-miR-1289 0 1 0
chr3:129560372|129561664 hsa-miR-6856-3p 0 1 0
chr3:129560372|129561664 hsa-miR-4746-5p 0 1 0
chr3:129560372|129561664 hsa-miR-2277-5p 1 0 0
chr3:129560372|129561664 hsa-miR-331-3p 1 0 0
chr3:129560372|129561664 hsa-miR-3184-3p 0 1 0
chr3:129560372|129561664 hsa-miR-3675-5p 0 1 0
chr3:129560372|129561664 hsa-miR-4639-5p 0 1 0
chr3:129560372|129561664 hsa-miR-1207-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4763-3p 1 0 0
chr3:129560372|129561664 hsa-miR-6769b-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6816-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6865-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6870-5p 1 1 0
chr3:129560372|129561664 hsa-miR-1343-5p 1 0 0
chr3:129560372|129561664 hsa-miR-5001-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6737-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6752-5p 1 1 0
chr3:129560372|129561664 hsa-miR-6756-5p 1 1 0
chr3:129560372|129561664 hsa-miR-6769a-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6803-5p 1 1 0
chr3:129560372|129561664 hsa-miR-6815-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6819-5p 1 0 0
chr3:129560372|129561664 hsa-miR-7110-5p 1 1 0
chr3:129560372|129561664 hsa-miR-10401-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6751-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6763-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6774-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6797-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6808-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6879-5p 1 0 0
chr3:129560372|129561664 hsa-miR-7111-5p 1 1 0
chr3:129560372|129561664 hsa-miR-3620-5p 1 0 0
chr3:129560372|129561664 hsa-miR-5196-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6836-5p 0 1 0
chr3:129560372|129561664 hsa-miR-10396b-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4649-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4745-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6729-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6777-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6795-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6846-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6848-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6858-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6887-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6889-5p 1 0 0
chr3:129560372|129561664 hsa-miR-939-5p 1 0 0
chr3:129560372|129561664 hsa-miR-4758-5p 1 0 0
chr3:129560372|129561664 hsa-miR-10396a-3p 0 1 0
chr3:129560372|129561664 hsa-miR-10396b-3p 0 1 0
chr3:129560372|129561664 hsa-miR-6856-5p 1 0 0
chr3:129560372|129561664 hsa-miR-7843-5p 1 1 0
chr3:129560372|129561664 hsa-miR-324-3p 1 1 0
chr3:129560372|129561664 hsa-miR-6750-5p 0 1 0
chr3:129560372|129561664 hsa-miR-3184-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6724-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6762-5p 1 0 0
chr3:129560372|129561664 hsa-miR-6822-5p 0 1 0
chr3:129560372|129561664 hsa-miR-6775-3p 1 1 0
chr3:129560372|129561664 hsa-miR-10392-3p 0 1 0
chr3:129560372|129561664 hsa-miR-6512-3p 0 1 0
chr3:129560372|129561664 hsa-miR-6744-3p 0 1 0
chr3:129560372|129561664 hsa-miR-135a-2-3p 1 0 0
chr3:129560372|129561664 hsa-miR-526b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:129560372|129561664
ORF Type ORF1
Protein Length 120
Nucleotide Length 360
Protein Sequence MALPVRLLGLRQLVRRQHLGGRAVVSVRTRPHPRPPVGGLALPCFLAHKGCGSLLILGPIPTPPPPSLSQGWEHFSQEAQGHRKPRPHPLRGWIPRGRGWALTKWKYFSVSKSFTRPSVL
Nucleotide Sequence ATGGCTCTGCCGGTGAGACTTCTTGGGCTCCGCCAGCTCGTCCGTAGGCAGCACCTGGGAGGCCGGGCAGTGGTCAGTGTCCGCACCAGGCCCCATCCTCGGCCGCCTGTGGGAGGTCTGGCTCTGCCATGCTTCTTAGCACACAAGGGCTGTGGTTCCCTCCTGATTCTGGGCCCCATCCCTACTCCCCCACCCCCCAGCCTTTCGCAGGGCTGGGAGCACTTTTCCCAAGAGGCCCAGGGCCACAGAAAGCCAAGGCCACACCCACTGAGGGGCTGGATCCCCCGGGGCCGAGGTTGGGCACTCACCAAATGGAAATACTTCTCTGTGTCCAAGTCTTTCACTCGGCCCAGTGTGTTG

CircID chr3:129560372|129561664
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MGSASSSVGSTWEAGQWSVSAPGPILGRLWEVWLCHAS
Nucleotide Sequence TTGGGCTCCGCCAGCTCGTCCGTAGGCAGCACCTGGGAGGCCGGGCAGTGGTCAGTGTCCGCACCAGGCCCCATCCTCGGCCGCCTGTGGGAGGTCTGGCTCTGCCATGCTTCTTAG

CircID chr3:129560372|129561664
ORF Type ORF3
Protein Length 78
Nucleotide Length 234
Protein Sequence MLLSTQGLWFPPDSGPHPYSPTPQPFAGLGALFPRGPGPQKAKATPTEGLDPPGPRLGTHQMEILLCVQVFHSAQCVV
Nucleotide Sequence ATGCTTCTTAGCACACAAGGGCTGTGGTTCCCTCCTGATTCTGGGCCCCATCCCTACTCCCCCACCCCCCAGCCTTTCGCAGGGCTGGGAGCACTTTTCCCAAGAGGCCCAGGGCCACAGAAAGCCAAGGCCACACCCACTGAGGGGCTGGATCCCCCGGGGCCGAGGTTGGGCACTCACCAAATGGAAATACTTCTCTGTGTCCAAGTCTTTCACTCGGCCCAGTGTGTTGTC

CircID chr3:129560372|129561664
ORF Type ORF4
Protein Length 120
Nucleotide Length 360
Protein Sequence MGRVKDLDTEKYFHLVSAQPRPRGIQPLSGCGLGFLWPWASWEKCSQPCERLGGGGVGMGPRIRREPQPLCAKKHGRARPPTGGRGWGLVRTLTTARPPRCCLRTSWRSPRSLTGRAIAR
Nucleotide Sequence CTGGGCCGAGTGAAAGACTTGGACACAGAGAAGTATTTCCATTTGGTGAGTGCCCAACCTCGGCCCCGGGGGATCCAGCCCCTCAGTGGGTGTGGCCTTGGCTTTCTGTGGCCCTGGGCCTCTTGGGAAAAGTGCTCCCAGCCCTGCGAAAGGCTGGGGGGTGGGGGAGTAGGGATGGGGCCCAGAATCAGGAGGGAACCACAGCCCTTGTGTGCTAAGAAGCATGGCAGAGCCAGACCTCCCACAGGCGGCCGAGGATGGGGCCTGGTGCGGACACTGACCACTGCCCGGCCTCCCAGGTGCTGCCTACGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCGCAAGA

CircID chr3:129560372|129561664
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MPGLPGAAYGRAGGAQEVSPAEPSQE
Nucleotide Sequence CTGCCCGGCCTCCCAGGTGCTGCCTACGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCGCAAGAA

CircID chr3:129560372|129561664
ORF Type ORF6
Protein Length 34
Nucleotide Length 105
Protein Sequence MGLLGKVLPALRKAGGWGSRDGAQNQEGTTALVC
Nucleotide Sequence CTGGGCCTCTTGGGAAAAGTGCTCCCAGCCCTGCGAAAGGCTGGGGGGTGGGGGAGTAGGGATGGGGCCCAGAATCAGGAGGGAACCACAGCCCTTGTGTGCTAA

CircID chr3:129560372|129561664
ORF Type ORF7
Protein Length 35
Nucleotide Length 105
Protein Sequence MGPGADTDHCPASQVLPTDELAEPKKSHRQSHRKK
Nucleotide Sequence ATGGGGCCTGGTGCGGACACTGACCACTGCCCGGCCTCCCAGGTGCTGCCTACGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCGCAAGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites