CircRNA Information

General Information
circRNA Basic Information
CircID chr3:133948621|133948971
Strand -
CircType exon
Host Gene ENSG00000174640.11;
Algorism CIRI2;
Sequence GGAGGAGAAGGTGCACTGGGCCAGGACCACCAGGACGAAGAGTGAGTTCATCAGGAGCCTCAGAAAGATGCATGGAAACCCTGTGAACAGACCGCTGTCAAGGCTCTGGCAGAACCCCTGGGCTGCAGGCACACCTAGGGGATGGGCCAGTTACAGGCCCTCTGCTCCTACTGTCCCTTACCGCACACAACACCACAGGGGCTGGGGTCCCCCTGGCCACTATCCCCTCCCCCGCACTGTGCCAGCCCACCCAGGGCTGTAGGGTCAGTTACGTTTAATGAAATCCACCAGGGAGCCTCTTGACTTGGCCTCCTCCAACTTCCTTGCTTCATCTGCTGTGGCAGGAGCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:133948621|133948971 hsa-miR-27a-5p 0 0 1
chr3:133948621|133948971 hsa-miR-27a-3p 0 0 1
chr3:133948621|133948971 hsa-miR-148a-5p 0 0 1
chr3:133948621|133948971 hsa-miR-148a-3p 0 0 1
chr3:133948621|133948971 hsa-miR-27b-5p 0 0 1
chr3:133948621|133948971 hsa-miR-27b-3p 0 0 1
chr3:133948621|133948971 hsa-miR-152-5p 0 0 1
chr3:133948621|133948971 hsa-miR-152-3p 0 0 1
chr3:133948621|133948971 hsa-miR-148b-5p 0 0 1
chr3:133948621|133948971 hsa-miR-148b-3p 0 0 1
chr3:133948621|133948971 hsa-miR-335-5p 0 0 1
chr3:133948621|133948971 hsa-miR-335-3p 0 0 1
chr3:133948621|133948971 hsa-miR-193b-5p 0 0 1
chr3:133948621|133948971 hsa-miR-193b-3p 0 0 1
chr3:133948621|133948971 hsa-miR-504-5p 0 0 1
chr3:133948621|133948971 hsa-miR-504-3p 0 0 1
chr3:133948621|133948971 hsa-miR-587 0 0 1
chr3:133948621|133948971 hsa-miR-765 0 0 1
chr3:133948621|133948971 hsa-miR-541-5p 0 0 1
chr3:133948621|133948971 hsa-miR-541-3p 0 0 1
chr3:133948621|133948971 hsa-miR-708-5p 0 0 1
chr3:133948621|133948971 hsa-miR-708-3p 0 0 1
chr3:133948621|133948971 hsa-miR-147b-5p 0 0 1
chr3:133948621|133948971 hsa-miR-147b-3p 0 0 1
chr3:133948621|133948971 hsa-miR-744-5p 0 0 1
chr3:133948621|133948971 hsa-miR-744-3p 0 0 1
chr3:133948621|133948971 hsa-miR-922 0 1 1
chr3:133948621|133948971 hsa-miR-1290 0 0 1
chr3:133948621|133948971 hsa-miR-1293 1 0 1
chr3:133948621|133948971 hsa-miR-1825 0 1 1
chr3:133948621|133948971 hsa-miR-485-5p 0 0 1
chr3:133948621|133948971 hsa-miR-1184 0 0 1
chr3:133948621|133948971 hsa-miR-654-5p 0 0 1
chr3:133948621|133948971 hsa-miR-28-5p 0 0 1
chr3:133948621|133948971 hsa-miR-876-3p 0 0 1
chr3:133948621|133948971 hsa-miR-513a-5p 0 0 1
chr3:133948621|133948971 hsa-miR-582-3p 0 0 1
chr3:133948621|133948971 hsa-miR-876-5p 0 0 1
chr3:133948621|133948971 hsa-miR-193a-3p 0 0 1
chr3:133948621|133948971 hsa-miR-128 0 0 1
chr3:133948621|133948971 hsa-miR-323-5p 0 0 1
chr3:133948621|133948971 hsa-miR-550 0 0 1
chr3:133948621|133948971 hsa-miR-220c 0 0 1
chr3:133948621|133948971 hsa-miR-768-5p 0 0 1
chr3:133948621|133948971 hsa-miR-147 0 0 1
chr3:133948621|133948971 hsa-miR-631 1 0 0
chr3:133948621|133948971 hsa-miR-762 1 0 0
chr3:133948621|133948971 hsa-miR-892b 0 1 0
chr3:133948621|133948971 hsa-miR-1538 1 0 0
chr3:133948621|133948971 hsa-miR-3135a 0 1 0
chr3:133948621|133948971 hsa-miR-3138 1 0 0
chr3:133948621|133948971 hsa-miR-3165 1 0 0
chr3:133948621|133948971 hsa-miR-4298 1 1 0
chr3:133948621|133948971 hsa-miR-4322 1 0 0
chr3:133948621|133948971 hsa-miR-4292 1 0 0
chr3:133948621|133948971 hsa-miR-3650 0 1 0
chr3:133948621|133948971 hsa-miR-3651 0 1 0
chr3:133948621|133948971 hsa-miR-4456 0 1 0
chr3:133948621|133948971 hsa-miR-4498 0 1 0
chr3:133948621|133948971 hsa-miR-4512 0 1 0
chr3:133948621|133948971 hsa-miR-4534 1 0 0
chr3:133948621|133948971 hsa-miR-4669 1 0 0
chr3:133948621|133948971 hsa-miR-4688 1 0 0
chr3:133948621|133948971 hsa-miR-4706 1 0 0
chr3:133948621|133948971 hsa-miR-4739 1 0 0
chr3:133948621|133948971 hsa-miR-4741 1 0 0
chr3:133948621|133948971 hsa-miR-5090 1 0 0
chr3:133948621|133948971 hsa-miR-5685 0 1 0
chr3:133948621|133948971 hsa-miR-5787 1 0 0
chr3:133948621|133948971 hsa-miR-6081 1 0 0
chr3:133948621|133948971 hsa-miR-6088 1 1 0
chr3:133948621|133948971 hsa-miR-8052 1 0 0
chr3:133948621|133948971 hsa-miR-8060 1 1 0
chr3:133948621|133948971 hsa-miR-8078 1 0 0
chr3:133948621|133948971 hsa-miR-150-3p 1 0 0
chr3:133948621|133948971 hsa-miR-4747-3p 1 0 0
chr3:133948621|133948971 hsa-miR-18a-3p 1 0 0
chr3:133948621|133948971 hsa-miR-323a-5p 1 1 0
chr3:133948621|133948971 hsa-miR-149-5p 1 0 0
chr3:133948621|133948971 hsa-miR-7106-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6825-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6894-5p 1 0 0
chr3:133948621|133948971 hsa-miR-224-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6510-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6728-5p 1 0 0
chr3:133948621|133948971 hsa-miR-8071 1 0 0
chr3:133948621|133948971 hsa-miR-6089 1 0 0
chr3:133948621|133948971 hsa-miR-6880-5p 1 0 0
chr3:133948621|133948971 hsa-miR-7847-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6867-5p 1 1 0
chr3:133948621|133948971 hsa-miR-3677-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6759-5p 1 0 0
chr3:133948621|133948971 hsa-miR-23b-5p 0 1 0
chr3:133948621|133948971 hsa-miR-7845-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6748-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6793-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6796-5p 1 0 0
chr3:133948621|133948971 hsa-miR-4725-5p 0 1 0
chr3:133948621|133948971 hsa-miR-2467-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6881-5p 1 0 0
chr3:133948621|133948971 hsa-miR-2467-3p 0 1 0
chr3:133948621|133948971 hsa-miR-6735-3p 0 1 0
chr3:133948621|133948971 hsa-miR-1343-3p 1 0 0
chr3:133948621|133948971 hsa-miR-939-3p 1 0 0
chr3:133948621|133948971 hsa-miR-7109-5p 1 0 0
chr3:133948621|133948971 hsa-miR-149-3p 1 1 0
chr3:133948621|133948971 hsa-miR-6830-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6824-5p 1 1 0
chr3:133948621|133948971 hsa-miR-7156-3p 0 1 0
chr3:133948621|133948971 hsa-miR-6892-5p 0 1 0
chr3:133948621|133948971 hsa-miR-7152-3p 1 0 0
chr3:133948621|133948971 hsa-miR-2115-5p 1 0 0
chr3:133948621|133948971 hsa-miR-7106-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6741-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6856-3p 0 1 0
chr3:133948621|133948971 hsa-miR-328-3p 1 0 0
chr3:133948621|133948971 hsa-miR-3151-3p 0 1 0
chr3:133948621|133948971 hsa-miR-6794-3p 0 1 0
chr3:133948621|133948971 hsa-miR-4727-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6750-3p 0 1 0
chr3:133948621|133948971 hsa-miR-5581-3p 0 1 0
chr3:133948621|133948971 hsa-miR-1233-5p 1 0 0
chr3:133948621|133948971 hsa-miR-4763-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6769b-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6778-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6812-5p 1 0 0
chr3:133948621|133948971 hsa-miR-5001-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6743-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6756-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6769a-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6803-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6851-5p 1 0 0
chr3:133948621|133948971 hsa-miR-10401-5p 1 0 0
chr3:133948621|133948971 hsa-miR-11181-3p 1 1 0
chr3:133948621|133948971 hsa-miR-7111-5p 1 1 0
chr3:133948621|133948971 hsa-miR-320a-5p 0 1 0
chr3:133948621|133948971 hsa-miR-4685-3p 1 0 0
chr3:133948621|133948971 hsa-miR-3620-5p 0 1 0
chr3:133948621|133948971 hsa-miR-4728-5p 1 1 0
chr3:133948621|133948971 hsa-miR-328-5p 1 0 0
chr3:133948621|133948971 hsa-miR-4649-5p 1 0 0
chr3:133948621|133948971 hsa-miR-4745-3p 1 0 0
chr3:133948621|133948971 hsa-miR-4749-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6738-5p 1 0 0
chr3:133948621|133948971 hsa-miR-675-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6883-5p 0 1 0
chr3:133948621|133948971 hsa-miR-4723-5p 1 1 0
chr3:133948621|133948971 hsa-miR-1271-3p 0 1 0
chr3:133948621|133948971 hsa-miR-6785-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6791-5p 1 1 0
chr3:133948621|133948971 hsa-miR-6753-3p 0 1 0
chr3:133948621|133948971 hsa-miR-7107-3p 0 1 0
chr3:133948621|133948971 hsa-miR-9851-5p 0 1 0
chr3:133948621|133948971 hsa-miR-6775-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6783-3p 1 0 0
chr3:133948621|133948971 hsa-miR-6817-5p 1 0 0
chr3:133948621|133948971 hsa-miR-6764-5p 0 1 0
chr3:133948621|133948971 hsa-miR-494-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:133948621|133948971
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MGQLQALCSYCPLPHTTPQGLGSPWPLSPPPHCASPPRAVGSVTFNEIHQGAS
Nucleotide Sequence ATGGGCCAGTTACAGGCCCTCTGCTCCTACTGTCCCTTACCGCACACAACACCACAGGGGCTGGGGTCCCCCTGGCCACTATCCCCTCCCCCGCACTGTGCCAGCCCACCCAGGGCTGTAGGGTCAGTTACGTTTAATGAAATCCACCAGGGAGCCTCTTGA

CircID chr3:133948621|133948971
ORF Type ORF2
Protein Length 64
Nucleotide Length 195
Protein Sequence MHGNPVNRPLSRLWQNPWAAGTPRGWASYRPSAPTVPYRTQHHRGWGPPGHYPLPRTVPAHPGL
Nucleotide Sequence ATGCATGGAAACCCTGTGAACAGACCGCTGTCAAGGCTCTGGCAGAACCCCTGGGCTGCAGGCACACCTAGGGGATGGGCCAGTTACAGGCCCTCTGCTCCTACTGTCCCTTACCGCACACAACACCACAGGGGCTGGGGTCCCCCTGGCCACTATCCCCTCCCCCGCACTGTGCCAGCCCACCCAGGGCTGTAG

CircID chr3:133948621|133948971
ORF Type ORF3
Protein Length 51
Nucleotide Length 156
Protein Sequence MQAHLGDGPVTGPLLLLSLTAHNTTGAGVPLATIPSPALCQPTQGCRVSYV
Nucleotide Sequence CTGCAGGCACACCTAGGGGATGGGCCAGTTACAGGCCCTCTGCTCCTACTGTCCCTTACCGCACACAACACCACAGGGGCTGGGGTCCCCCTGGCCACTATCCCCTCCCCCGCACTGTGCCAGCCCACCCAGGGCTGTAGGGTCAGTTACGTTTAA

CircID chr3:133948621|133948971
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MAHPLGVPAAQGFCQSLDSGLFTGFPCIFLRLLMNSLFVLVVLAQCTFSS
Nucleotide Sequence CTGGCCCATCCCCTAGGTGTGCCTGCAGCCCAGGGGTTCTGCCAGAGCCTTGACAGCGGTCTGTTCACAGGGTTTCCATGCATCTTTCTGAGGCTCCTGATGAACTCACTCTTCGTCCTGGTGGTCCTGGCCCAGTGCACCTTCTCCTCC

CircID chr3:133948621|133948971
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MPQQMKQGSWRRPSQEAPWWISLNVTDPTALGGLAQCGGGDSGQGDPSPCGVVCGKGQ
Nucleotide Sequence CTGCCACAGCAGATGAAGCAAGGAAGTTGGAGGAGGCCAAGTCAAGAGGCTCCCTGGTGGATTTCATTAAACGTAACTGACCCTACAGCCCTGGGTGGGCTGGCACAGTGCGGGGGAGGGGATAGTGGCCAGGGGGACCCCAGCCCCTGTGGTGTTGTGTGCGGTAAGGGACAGTAG

CircID chr3:133948621|133948971
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MTLQPWVGWHSAGEGIVARGTPAPVVLCAVRDSRSRGPVTGPSPRCACSPGVLPEP
Nucleotide Sequence CTGACCCTACAGCCCTGGGTGGGCTGGCACAGTGCGGGGGAGGGGATAGTGGCCAGGGGGACCCCAGCCCCTGTGGTGTTGTGTGCGGTAAGGGACAGTAGGAGCAGAGGGCCTGTAACTGGCCCATCCCCTAGGTGTGCCTGCAGCCCAGGGGTTCTGCCAGAGCCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites