CircRNA Information

General Information
circRNA Basic Information
CircID chr3:138033319|138033482
Strand +
CircType exon
Host Gene ENSG00000066405.11;
Algorism CIRI2;
Sequence CCAGCTGAGCCACACCGCACTACCTGAGACCTGACCAGGGACTTTCTGGTGGTAGAAGGGAGAGCTCATTGTGCCCTGTGGCCTTCAACTCAAATGGATGCTCTTCAACTCAAATCCAGAGAGCACTTAACAAACTCCATGCTCTAGATTGCTCAACCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:138033319|138033482 hsa-miR-302a-5p 0 0 1
chr3:138033319|138033482 hsa-miR-302a-3p 0 0 1
chr3:138033319|138033482 hsa-miR-302b-5p 0 0 1
chr3:138033319|138033482 hsa-miR-302b-3p 0 0 1
chr3:138033319|138033482 hsa-miR-302c-5p 0 0 1
chr3:138033319|138033482 hsa-miR-302c-3p 0 0 1
chr3:138033319|138033482 hsa-miR-302d-5p 0 0 1
chr3:138033319|138033482 hsa-miR-302d-3p 0 0 1
chr3:138033319|138033482 hsa-miR-372-5p 0 0 1
chr3:138033319|138033482 hsa-miR-372-3p 0 0 1
chr3:138033319|138033482 hsa-miR-373-5p 0 0 1
chr3:138033319|138033482 hsa-miR-373-3p 0 0 1
chr3:138033319|138033482 hsa-miR-326 -1 0 1
chr3:138033319|138033482 hsa-miR-196b-5p 0 0 1
chr3:138033319|138033482 hsa-miR-196b-3p 0 0 1
chr3:138033319|138033482 hsa-miR-520e-5p 0 0 1
chr3:138033319|138033482 hsa-miR-520e-3p 0 0 1
chr3:138033319|138033482 hsa-miR-520b-5p 0 0 1
chr3:138033319|138033482 hsa-miR-520b-3p 0 0 1
chr3:138033319|138033482 hsa-miR-571 -13 0 1
chr3:138033319|138033482 hsa-miR-1290 -8 0 1
chr3:138033319|138033482 hsa-miR-1266-5p 0 0 1
chr3:138033319|138033482 hsa-miR-1266-3p 0 0 1
chr3:138033319|138033482 hsa-miR-302e -2 0 1
chr3:138033319|138033482 hsa-miR-296-3p -22 0 1
chr3:138033319|138033482 hsa-miR-1207-3p 0 0 1
chr3:138033319|138033482 hsa-miR-556-5p 0 0 1
chr3:138033319|138033482 hsa-miR-518d-5p -12 0 1
chr3:138033319|138033482 hsa-miR-519b-5p -17 0 1
chr3:138033319|138033482 hsa-miR-519c-5p -17 0 1
chr3:138033319|138033482 hsa-miR-520c-5p -12 0 1
chr3:138033319|138033482 hsa-miR-330-5p -9 0 1
chr3:138033319|138033482 hsa-miR-520d-3p -9 1 1
chr3:138033319|138033482 hsa-miR-519b-3p -9 0 1
chr3:138033319|138033482 hsa-miR-519c-3p -8 0 1
chr3:138033319|138033482 hsa-miR-876-5p -4 0 1
chr3:138033319|138033482 hsa-miR-520a-3p -7 1 1
chr3:138033319|138033482 hsa-miR-520c-3p -5 0 1
chr3:138033319|138033482 hsa-miR-220c 0 0 1
chr3:138033319|138033482 hsa-miR-644 0 0 1
chr3:138033319|138033482 hsa-miR-24 0 0 1
chr3:138033319|138033482 hsa-miR-526a 0 0 1
chr3:138033319|138033482 hsa-miR-196a 0 0 1
chr3:138033319|138033482 hsa-miR-768-3p 0 0 1
chr3:138033319|138033482 hsa-miR-219-1-3p 0 0 1
chr3:138033319|138033482 hsa-miR-519a 0 0 1
chr3:138033319|138033482 hsa-miR-3132 1 0 0
chr3:138033319|138033482 hsa-miR-3147 -20 1 0
chr3:138033319|138033482 hsa-miR-3978 1 0 0
chr3:138033319|138033482 hsa-miR-4656 1 0 0
chr3:138033319|138033482 hsa-miR-4689 1 0 0
chr3:138033319|138033482 hsa-miR-4779 -15 1 0
chr3:138033319|138033482 hsa-miR-5706 -2 1 0
chr3:138033319|138033482 hsa-miR-6088 1 0 0
chr3:138033319|138033482 hsa-miR-6126 -10 1 0
chr3:138033319|138033482 hsa-miR-8055 1 0 0
chr3:138033319|138033482 hsa-miR-11399 -7 1 0
chr3:138033319|138033482 hsa-miR-1972 0 1 0
chr3:138033319|138033482 hsa-miR-5187-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6880-5p 1 0 0
chr3:138033319|138033482 hsa-miR-4695-5p 1 0 0
chr3:138033319|138033482 hsa-miR-4753-5p -4 1 0
chr3:138033319|138033482 hsa-miR-197-5p 1 0 0
chr3:138033319|138033482 hsa-miR-4655-3p 1 0 0
chr3:138033319|138033482 hsa-miR-4713-5p 1 0 0
chr3:138033319|138033482 hsa-miR-1226-5p -15 1 0
chr3:138033319|138033482 hsa-miR-877-5p 1 0 0
chr3:138033319|138033482 hsa-miR-4732-5p 1 0 0
chr3:138033319|138033482 hsa-miR-149-3p 1 0 0
chr3:138033319|138033482 hsa-miR-5010-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6867-3p -12 1 0
chr3:138033319|138033482 hsa-miR-4717-5p -10 1 0
chr3:138033319|138033482 hsa-miR-196a-5p -3 1 0
chr3:138033319|138033482 hsa-miR-1233-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6756-5p 1 0 0
chr3:138033319|138033482 hsa-miR-1249-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6797-5p 1 0 0
chr3:138033319|138033482 hsa-miR-4685-3p -11 1 0
chr3:138033319|138033482 hsa-miR-4728-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6848-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6858-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6883-5p 1 0 0
chr3:138033319|138033482 hsa-miR-3940-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6731-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6785-5p 1 0 0
chr3:138033319|138033482 hsa-miR-518e-5p 1 0 0
chr3:138033319|138033482 hsa-miR-519a-5p 1 0 0
chr3:138033319|138033482 hsa-miR-522-5p 1 0 0
chr3:138033319|138033482 hsa-miR-523-5p 1 0 0
chr3:138033319|138033482 hsa-miR-6839-5p -10 1 0
chr3:138033319|138033482 hsa-miR-4782-5p -5 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:138033319|138033482
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MTRDFLVVEGRAHCALWPSTQMDALQLKSREHLTNSML
Nucleotide Sequence CTGACCAGGGACTTTCTGGTGGTAGAAGGGAGAGCTCATTGTGCCCTGTGGCCTTCAACTCAAATGGATGCTCTTCAACTCAAATCCAGAGAGCACTTAACAAACTCCATGCTCTAG
CircID chr3:138033319|138033482
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MRPDQGLSGGRRESSLCPVAFNSNGCSSTQIQRALNKLHALDCSTLL
Nucleotide Sequence CTGAGACCTGACCAGGGACTTTCTGGTGGTAGAAGGGAGAGCTCATTGTGCCCTGTGGCCTTCAACTCAAATGGATGCTCTTCAACTCAAATCCAGAGAGCACTTAACAAACTCCATGCTCTAGATTGCTCAACCCTCCTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab