CircNet

General Information

circRNA Basic Information

CircID	chr3:138500735\|138532570
Strand	-
CircType	exon
Host Gene	ENSG00000114107.8;
Algorism	CIRI2;find_circ;DCC;
Sequence	GTTGCTTTGTCTAATTGATTACTATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATCAAAATCTAAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:138500735\|138532570
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MNLKLEKFIHKGNIKKMKVSQKKKTTTEIWMPHQLIKAF*
Nucleotide Sequence	ATGAATCTAAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGAAGAAAACGACTACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAA

CircID	chr3:138500735\|138532570
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MTLKGLYKLVRHPDFCSRFLLLTDFHLLYIAFVYEFF*
Nucleotide Sequence	ATGACATTAAAAGGCCTTTATAAGTTGGTGAGGCATCCAGATTTCTGTAGTCGTTTTCTTCTTCTGACTGACTTTCATCTTCTTTATATTGCCTTTGTGTATGAATTTTTCTAA

CircID	chr3:138500735\|138532570
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MSLQNQLKESKSKIDALSSEKLNLQKDLET
Nucleotide Sequence	ATGTCATTACAGAATCAACTCAAGGAATCAAAATCTAAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:138500735\|138532570	KHSRP	4	0	0
chr3:138500735\|138532570	ELAVL1	5	5	1
chr3:138500735\|138532570	CELF2	2	1	0
chr3:138500735\|138532570	FMR1	0	1	0
chr3:138500735\|138532570	UPF1	0	1	0
chr3:138500735\|138532570	TAF15	1	1	0
chr3:138500735\|138532570	CPSF7	8	1	1
chr3:138500735\|138532570	CPSF6	1	0	1
chr3:138500735\|138532570	NUDT21	5	1	0
chr3:138500735\|138532570	CPSF3	1	0	0
chr3:138500735\|138532570	CPSF1	0	1	0
chr3:138500735\|138532570	FUS	3	1	0
chr3:138500735\|138532570	SRSF7	0	1	0
chr3:138500735\|138532570	SRSF1	1	1	0
chr3:138500735\|138532570	NOP58	1	2	4
chr3:138500735\|138532570	U2AF1	1	1	0
chr3:138500735\|138532570	ADAR	0	1	0
chr3:138500735\|138532570	U2AF2	14	13	1
chr3:138500735\|138532570	HNRNPU	1	0	0
chr3:138500735\|138532570	DDX54	0	6	7
chr3:138500735\|138532570	RBM10	0	3	0
chr3:138500735\|138532570	HNRNPL	6	0	0
chr3:138500735\|138532570	SF3A3	1	0	0
chr3:138500735\|138532570	FIP1L1	1	0	0
chr3:138500735\|138532570	PTBP1	0	3	0
chr3:138500735\|138532570	HNRNPC	25	9	3
chr3:138500735\|138532570	TRA2A	0	0	1
chr3:138500735\|138532570	DHX9	3	0	0
chr3:138500735\|138532570	ACIN1	0	3	0
chr3:138500735\|138532570	DDX3X	0	0	1
chr3:138500735\|138532570	TIAL1	0	1	0
chr3:138500735\|138532570	SMNDC1	2	1	0
chr3:138500735\|138532570	HNRNPA1	9	2	0
chr3:138500735\|138532570	FXR2	0	0	1
chr3:138500735\|138532570	IGF2BP1	0	1	0
chr3:138500735\|138532570	IGF2BP3	0	0	1
chr3:138500735\|138532570	IGF2BP2	1	1	4
chr3:138500735\|138532570	TARDBP	4	8	0
chr3:138500735\|138532570	BUD13	0	0	1
chr3:138500735\|138532570	PRPF8	0	2	0
chr3:138500735\|138532570	EIF4G2	0	0	1
chr3:138500735\|138532570	CSTF2T	5	1	2
chr3:138500735\|138532570	CSTF2	7	3	0
chr3:138500735\|138532570	WDR33	2	0	0
chr3:138500735\|138532570	AGO2	0	3	0
chr3:138500735\|138532570	EWSR1	0	1	0
chr3:138500735\|138532570	EIF4A3	0	7	4
chr3:138500735\|138532570	FBL	0	1	2

CircRNA Information