CircRNA Information

General Information
circRNA Basic Information
CircID chr3:14141663|14141820
Strand -
CircType exon
Host Gene ENSG00000170876.7;
Algorism CIRI2;
Sequence CTCGCTGACCCTGCTGACCGTGGCGGCTGGCTGGCTCTTCTACCGACCCCTGTGGGCCCTCCTCATTGCCGGCCTGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:14141663|14141820 hsa-miR-214-5p 0 0 1
chr3:14141663|14141820 hsa-miR-214-3p 0 0 1
chr3:14141663|14141820 hsa-miR-647 0 0 1
chr3:14141663|14141820 hsa-miR-922 0 0 1
chr3:14141663|14141820 hsa-miR-1182 0 0 1
chr3:14141663|14141820 hsa-miR-615-3p 0 0 1
chr3:14141663|14141820 hsa-miR-193a-5p 0 0 1
chr3:14141663|14141820 hsa-miR-483-3p 0 0 1
chr3:14141663|14141820 hsa-miR-886-5p 0 0 1
chr3:14141663|14141820 hsa-miR-220c 0 0 1
chr3:14141663|14141820 hsa-miR-886-3p 0 0 1
chr3:14141663|14141820 hsa-miR-564 1 0 0
chr3:14141663|14141820 hsa-miR-658 1 0 0
chr3:14141663|14141820 hsa-miR-2861 1 0 0
chr3:14141663|14141820 hsa-miR-3141 1 0 0
chr3:14141663|14141820 hsa-miR-3147 1 0 0
chr3:14141663|14141820 hsa-miR-3621 1 0 0
chr3:14141663|14141820 hsa-miR-4512 1 0 0
chr3:14141663|14141820 hsa-miR-4651 1 0 0
chr3:14141663|14141820 hsa-miR-4689 1 0 0
chr3:14141663|14141820 hsa-miR-4721 1 0 0
chr3:14141663|14141820 hsa-miR-4739 1 0 0
chr3:14141663|14141820 hsa-miR-4751 1 0 0
chr3:14141663|14141820 hsa-miR-12128 1 0 0
chr3:14141663|14141820 hsa-miR-6765-5p 1 0 0
chr3:14141663|14141820 hsa-miR-3150a-3p 1 0 0
chr3:14141663|14141820 hsa-miR-7106-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6825-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6894-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1227-5p 1 0 0
chr3:14141663|14141820 hsa-miR-3663-3p 1 0 0
chr3:14141663|14141820 hsa-miR-6089 1 0 0
chr3:14141663|14141820 hsa-miR-6757-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4695-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4722-5p 1 0 0
chr3:14141663|14141820 hsa-miR-3677-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6727-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6810-5p 1 0 0
chr3:14141663|14141820 hsa-miR-5088-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1229-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4640-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1228-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6771-5p 1 0 0
chr3:14141663|14141820 hsa-miR-149-3p 1 0 0
chr3:14141663|14141820 hsa-miR-6895-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1225-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4661-3p 1 0 0
chr3:14141663|14141820 hsa-miR-140-3p 1 0 0
chr3:14141663|14141820 hsa-miR-4763-3p 1 0 0
chr3:14141663|14141820 hsa-miR-6816-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1343-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6743-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6756-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1249-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6722-3p 1 0 0
chr3:14141663|14141820 hsa-miR-6763-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6779-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6797-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6875-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6879-5p 1 0 0
chr3:14141663|14141820 hsa-miR-3620-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4728-5p 1 0 0
chr3:14141663|14141820 hsa-miR-5196-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6780b-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6836-5p 1 0 0
chr3:14141663|14141820 hsa-miR-328-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4649-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4725-3p 1 0 0
chr3:14141663|14141820 hsa-miR-4726-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4745-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6729-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6794-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6858-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6885-5p 1 0 0
chr3:14141663|14141820 hsa-miR-1238-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4758-5p 1 0 0
chr3:14141663|14141820 hsa-miR-10394-3p 1 0 0
chr3:14141663|14141820 hsa-miR-6773-5p 1 0 0
chr3:14141663|14141820 hsa-miR-4664-5p 1 0 0
chr3:14141663|14141820 hsa-miR-6891-5p 1 0 0
chr3:14141663|14141820 hsa-miR-3184-5p 1 0 0
chr3:14141663|14141820 hsa-miR-7107-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:14141663|14141820
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MALLPTPVGPPHCRPGPCAHPCCSDTGASQKVGVKRPWHPPD
Nucleotide Sequence CTGGCTCTTCTACCGACCCCTGTGGGCCCTCCTCATTGCCGGCCTGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGAC
CircID chr3:14141663|14141820
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MTLLTVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE
Nucleotide Sequence CTGACCCTGCTGACCGTGGCGGCTGGCTGGCTCTTCTACCGACCCCTGTGGGCCCTCCTCATTGCCGGCCTGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGA
CircID chr3:14141663|14141820
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MAGSSTDPCGPSSLPAWPLCPSLLLGHGCQPKSWSEKTLAPARH
Nucleotide Sequence CTGGCTGGCTCTTCTACCGACCCCTGTGGGCCCTCCTCATTGCCGGCCTGGCCCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCAAAAAGTTGGAGTGAAAAGACCCTGGCACCCGCCCGACAC
CircID chr3:14141663|14141820
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MAGTRVRATRMGTRARPAMRRAHRGR
Nucleotide Sequence TTGGCTGGCACCCGTGTCCGAGCAACAAGGATGGGCACAAGGGCCAGGCCGGCAATGAGGAGGGCCCACAGGGGTCGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab