CircRNA Information

General Information
circRNA Basic Information
CircID chr3:14145771|14146012
Strand -
CircType exon
Host Gene ENSG00000228242.5;
Algorism CIRI2;
Sequence CTCCTCAGCTTGGCCTCGTCTCCCCTGACCCCGCCTCCGTGCATGCTGCCTCAGTTTGCCTTCTCAGCAGAGAAGCCCCCACCACCAGGGGCTGGGCATGCCCAGGGCAGGTGTGGGGCCTGTAGTGGGGCAGCAGCAACTGGTGGGTGCCCCTCTAGTGGGCGCTCAGCTCACAGCTGCTCAAATGGGAACAGGTGGGAAGCTGCTGCTTTCTTTTCCCTTTTGGTCTTCTTGGGCCCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:14145771|14146012 hsa-miR-15a-5p 0 0 1
chr3:14145771|14146012 hsa-miR-15a-3p 0 0 1
chr3:14145771|14146012 hsa-miR-107 0 1 1
chr3:14145771|14146012 hsa-miR-15b-5p 0 0 1
chr3:14145771|14146012 hsa-miR-15b-3p 0 0 1
chr3:14145771|14146012 hsa-miR-195-5p 0 0 1
chr3:14145771|14146012 hsa-miR-195-3p 0 0 1
chr3:14145771|14146012 hsa-miR-424-5p 0 0 1
chr3:14145771|14146012 hsa-miR-424-3p 0 0 1
chr3:14145771|14146012 hsa-miR-497-5p 0 0 1
chr3:14145771|14146012 hsa-miR-497-3p 0 0 1
chr3:14145771|14146012 hsa-miR-558 0 0 1
chr3:14145771|14146012 hsa-miR-612 0 1 1
chr3:14145771|14146012 hsa-miR-646 0 1 1
chr3:14145771|14146012 hsa-miR-874-5p 0 0 1
chr3:14145771|14146012 hsa-miR-874-3p 0 0 1
chr3:14145771|14146012 hsa-miR-541-5p 0 0 1
chr3:14145771|14146012 hsa-miR-541-3p 0 0 1
chr3:14145771|14146012 hsa-miR-942-5p 0 0 1
chr3:14145771|14146012 hsa-miR-942-3p 0 0 1
chr3:14145771|14146012 hsa-miR-1228-5p 0 0 1
chr3:14145771|14146012 hsa-miR-1228-3p 0 0 1
chr3:14145771|14146012 hsa-miR-1253 0 0 1
chr3:14145771|14146012 hsa-miR-1827 0 0 1
chr3:14145771|14146012 hsa-miR-296-5p 0 0 1
chr3:14145771|14146012 hsa-miR-146b-3p 0 0 1
chr3:14145771|14146012 hsa-miR-423-5p 0 0 1
chr3:14145771|14146012 hsa-miR-654-5p 0 1 1
chr3:14145771|14146012 hsa-miR-339-3p 0 0 1
chr3:14145771|14146012 hsa-miR-1224-3p 0 1 1
chr3:14145771|14146012 hsa-miR-331-3p 0 1 1
chr3:14145771|14146012 hsa-miR-188-3p 0 0 1
chr3:14145771|14146012 hsa-miR-876-3p 0 0 1
chr3:14145771|14146012 hsa-miR-324-3p 0 0 1
chr3:14145771|14146012 hsa-miR-1260 0 0 1
chr3:14145771|14146012 hsa-miR-1280 0 0 1
chr3:14145771|14146012 hsa-miR-323-5p 0 0 1
chr3:14145771|14146012 hsa-miR-103 0 0 1
chr3:14145771|14146012 hsa-miR-16 0 0 1
chr3:14145771|14146012 hsa-miR-1300 0 0 1
chr3:14145771|14146012 hsa-miR-1285 0 0 1
chr3:14145771|14146012 hsa-miR-663 0 0 1
chr3:14145771|14146012 hsa-miR-663a 1 1 0
chr3:14145771|14146012 hsa-miR-762 1 0 0
chr3:14145771|14146012 hsa-miR-1260a 0 1 0
chr3:14145771|14146012 hsa-miR-3141 1 0 0
chr3:14145771|14146012 hsa-miR-3175 0 1 0
chr3:14145771|14146012 hsa-miR-3196 1 0 0
chr3:14145771|14146012 hsa-miR-3197 1 0 0
chr3:14145771|14146012 hsa-miR-4322 0 1 0
chr3:14145771|14146012 hsa-miR-4253 0 1 0
chr3:14145771|14146012 hsa-miR-4286 0 1 0
chr3:14145771|14146012 hsa-miR-4292 0 1 0
chr3:14145771|14146012 hsa-miR-3714 0 1 0
chr3:14145771|14146012 hsa-miR-1268b 1 0 0
chr3:14145771|14146012 hsa-miR-4443 1 0 0
chr3:14145771|14146012 hsa-miR-4447 0 1 0
chr3:14145771|14146012 hsa-miR-4488 1 0 0
chr3:14145771|14146012 hsa-miR-4534 1 0 0
chr3:14145771|14146012 hsa-miR-3960 1 0 0
chr3:14145771|14146012 hsa-miR-4651 1 0 0
chr3:14145771|14146012 hsa-miR-4663 0 1 0
chr3:14145771|14146012 hsa-miR-4674 1 0 0
chr3:14145771|14146012 hsa-miR-4688 1 0 0
chr3:14145771|14146012 hsa-miR-4706 1 0 0
chr3:14145771|14146012 hsa-miR-4739 1 0 0
chr3:14145771|14146012 hsa-miR-5093 1 0 0
chr3:14145771|14146012 hsa-miR-6086 1 0 0
chr3:14145771|14146012 hsa-miR-6124 0 1 0
chr3:14145771|14146012 hsa-miR-7704 1 1 0
chr3:14145771|14146012 hsa-miR-8055 0 1 0
chr3:14145771|14146012 hsa-miR-8072 1 0 0
chr3:14145771|14146012 hsa-miR-8085 1 0 0
chr3:14145771|14146012 hsa-miR-12128 1 0 0
chr3:14145771|14146012 hsa-miR-18a-3p 0 1 0
chr3:14145771|14146012 hsa-miR-92a-2-5p 0 1 0
chr3:14145771|14146012 hsa-miR-6734-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6765-5p 1 1 0
chr3:14145771|14146012 hsa-miR-3150a-3p 1 0 0
chr3:14145771|14146012 hsa-miR-6825-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6799-5p 1 0 0
chr3:14145771|14146012 hsa-miR-139-3p 1 1 0
chr3:14145771|14146012 hsa-miR-3622a-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6089 1 1 0
chr3:14145771|14146012 hsa-miR-6873-5p 0 1 0
chr3:14145771|14146012 hsa-miR-4753-5p 0 1 0
chr3:14145771|14146012 hsa-miR-6727-5p 1 0 0
chr3:14145771|14146012 hsa-miR-3189-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6742-5p 1 0 0
chr3:14145771|14146012 hsa-miR-3180-3p 1 0 0
chr3:14145771|14146012 hsa-miR-6796-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6805-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6798-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6770-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6881-5p 1 0 0
chr3:14145771|14146012 hsa-miR-2467-3p 1 0 0
chr3:14145771|14146012 hsa-miR-6815-3p 0 1 0
chr3:14145771|14146012 hsa-miR-6786-5p 1 0 0
chr3:14145771|14146012 hsa-miR-939-3p 0 1 0
chr3:14145771|14146012 hsa-miR-5088-5p 1 0 0
chr3:14145771|14146012 hsa-miR-7109-5p 1 0 0
chr3:14145771|14146012 hsa-miR-1226-5p 1 0 0
chr3:14145771|14146012 hsa-miR-204-3p 0 1 0
chr3:14145771|14146012 hsa-miR-4640-5p 1 0 0
chr3:14145771|14146012 hsa-miR-1908-5p 1 1 0
chr3:14145771|14146012 hsa-miR-4787-5p 1 0 0
chr3:14145771|14146012 hsa-miR-3160-3p 0 1 0
chr3:14145771|14146012 hsa-miR-103a-3p 0 1 0
chr3:14145771|14146012 hsa-miR-6824-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6878-5p 1 0 0
chr3:14145771|14146012 hsa-miR-5584-5p 0 1 0
chr3:14145771|14146012 hsa-miR-4758-3p 0 1 0
chr3:14145771|14146012 hsa-miR-605-3p 0 1 0
chr3:14145771|14146012 hsa-miR-520g-5p 0 1 0
chr3:14145771|14146012 hsa-miR-10400-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4763-3p 1 0 0
chr3:14145771|14146012 hsa-miR-6787-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6812-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6816-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6870-5p 1 0 0
chr3:14145771|14146012 hsa-miR-1343-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6726-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6743-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6754-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6756-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6851-5p 1 0 0
chr3:14145771|14146012 hsa-miR-11181-3p 1 0 0
chr3:14145771|14146012 hsa-miR-6808-5p 1 0 0
chr3:14145771|14146012 hsa-miR-7111-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4728-5p 1 0 0
chr3:14145771|14146012 hsa-miR-10396a-5p 1 0 0
chr3:14145771|14146012 hsa-miR-10396b-5p 1 1 0
chr3:14145771|14146012 hsa-miR-1237-5p 1 1 0
chr3:14145771|14146012 hsa-miR-4632-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4726-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4749-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6735-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6794-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6795-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6846-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6848-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6887-5p 1 0 0
chr3:14145771|14146012 hsa-miR-3187-5p 0 1 0
chr3:14145771|14146012 hsa-miR-4697-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4723-5p 1 0 0
chr3:14145771|14146012 hsa-miR-939-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6856-5p 1 0 0
chr3:14145771|14146012 hsa-miR-6773-5p 1 1 0
chr3:14145771|14146012 hsa-miR-1914-3p 1 0 0
chr3:14145771|14146012 hsa-miR-4665-5p 1 0 0
chr3:14145771|14146012 hsa-miR-4646-5p 0 1 0
chr3:14145771|14146012 hsa-miR-6724-5p 1 1 0
chr3:14145771|14146012 hsa-miR-6791-5p 0 1 0
chr3:14145771|14146012 hsa-miR-7155-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:14145771|14146012
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence MASSPLTPPPCMLPQFAFSAEKPPPPGAGHAQGRCGACSGAAATGGCPSSGRSAHSCSNGNRWEAAAFFSLLVFLGP
Nucleotide Sequence TTGGCCTCGTCTCCCCTGACCCCGCCTCCGTGCATGCTGCCTCAGTTTGCCTTCTCAGCAGAGAAGCCCCCACCACCAGGGGCTGGGCATGCCCAGGGCAGGTGTGGGGCCTGTAGTGGGGCAGCAGCAACTGGTGGGTGCCCCTCTAGTGGGCGCTCAGCTCACAGCTGCTCAAATGGGAACAGGTGGGAAGCTGCTGCTTTCTTTTCCCTTTTGGTCTTCTTGGGCCCA
CircID chr3:14145771|14146012
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MPSQQRSPHHQGLGMPRAGVGPVVGQQQLVGAPLVGAQLTAAQMGTGGKLLLSFPFWSSWAH
Nucleotide Sequence TTGCCTTCTCAGCAGAGAAGCCCCCACCACCAGGGGCTGGGCATGCCCAGGGCAGGTGTGGGGCCTGTAGTGGGGCAGCAGCAACTGGTGGGTGCCCCTCTAGTGGGCGCTCAGCTCACAGCTGCTCAAATGGGAACAGGTGGGAAGCTGCTGCTTTCTTTTCCCTTTTGGTCTTCTTGGGCCCAC
CircID chr3:14145771|14146012
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MLLPHYRPHTCPGHAQPLVVGASLLRRQTEAACTEAGSGETRPS
Nucleotide Sequence TTGCTGCTGCCCCACTACAGGCCCCACACCTGCCCTGGGCATGCCCAGCCCCTGGTGGTGGGGGCTTCTCTGCTGAGAAGGCAAACTGAGGCAGCATGCACGGAGGCGGGGTCAGGGGAGACGAGGCCAAGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab