CircRNA Information

General Information
circRNA Basic Information
CircID chr3:14410453|14410602
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCTGAGGGAGGAAGCCTTCCATTGCCAGCCCAACCCTTCTCCTGGAGACCACCAGCCCTCTCCCTACCTTCCACGTTCTATTCCATGCAGTGGCCAGAGCTGCTCACCACGCTCCTTCTTGAGCTTTCCAGGAACCCCATCCTGGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:14410453|14410602 hsa-miR-214-5p 0 0 1
chr3:14410453|14410602 hsa-miR-214-3p 0 0 1
chr3:14410453|14410602 hsa-miR-217-5p 0 0 1
chr3:14410453|14410602 hsa-miR-217-3p 0 0 1
chr3:14410453|14410602 hsa-miR-588 1 1 1
chr3:14410453|14410602 hsa-miR-646 0 1 1
chr3:14410453|14410602 hsa-miR-766-5p 0 0 1
chr3:14410453|14410602 hsa-miR-766-3p 0 0 1
chr3:14410453|14410602 hsa-miR-665 1 0 1
chr3:14410453|14410602 hsa-miR-922 0 0 1
chr3:14410453|14410602 hsa-miR-1321 0 0 1
chr3:14410453|14410602 hsa-miR-296-3p 1 1 1
chr3:14410453|14410602 hsa-miR-876-3p 0 0 1
chr3:14410453|14410602 hsa-miR-875-3p 0 0 1
chr3:14410453|14410602 hsa-miR-516a-3p 0 0 1
chr3:14410453|14410602 hsa-miR-323-5p 0 0 1
chr3:14410453|14410602 hsa-miR-138 0 0 1
chr3:14410453|14410602 hsa-miR-206 1 0 0
chr3:14410453|14410602 hsa-miR-608 1 0 0
chr3:14410453|14410602 hsa-miR-658 1 0 0
chr3:14410453|14410602 hsa-miR-762 1 1 0
chr3:14410453|14410602 hsa-miR-765 1 0 0
chr3:14410453|14410602 hsa-miR-1183 1 0 0
chr3:14410453|14410602 hsa-miR-1293 1 0 0
chr3:14410453|14410602 hsa-miR-3141 1 0 0
chr3:14410453|14410602 hsa-miR-3147 1 1 0
chr3:14410453|14410602 hsa-miR-3154 1 1 0
chr3:14410453|14410602 hsa-miR-3170 0 1 0
chr3:14410453|14410602 hsa-miR-4298 1 0 0
chr3:14410453|14410602 hsa-miR-4270 1 0 0
chr3:14410453|14410602 hsa-miR-3916 1 0 0
chr3:14410453|14410602 hsa-miR-4456 0 1 0
chr3:14410453|14410602 hsa-miR-3689c 1 0 0
chr3:14410453|14410602 hsa-miR-4481 1 0 0
chr3:14410453|14410602 hsa-miR-4498 1 1 0
chr3:14410453|14410602 hsa-miR-4505 1 0 0
chr3:14410453|14410602 hsa-miR-2392 0 1 0
chr3:14410453|14410602 hsa-miR-4507 1 1 0
chr3:14410453|14410602 hsa-miR-4516 1 1 0
chr3:14410453|14410602 hsa-miR-4533 1 0 0
chr3:14410453|14410602 hsa-miR-1587 1 1 0
chr3:14410453|14410602 hsa-miR-4538 1 0 0
chr3:14410453|14410602 hsa-miR-4651 1 0 0
chr3:14410453|14410602 hsa-miR-4656 1 0 0
chr3:14410453|14410602 hsa-miR-4657 1 0 0
chr3:14410453|14410602 hsa-miR-4660 1 1 0
chr3:14410453|14410602 hsa-miR-4710 1 0 0
chr3:14410453|14410602 hsa-miR-4721 1 0 0
chr3:14410453|14410602 hsa-miR-4739 1 0 0
chr3:14410453|14410602 hsa-miR-4741 1 0 0
chr3:14410453|14410602 hsa-miR-5194 1 0 0
chr3:14410453|14410602 hsa-miR-5703 1 0 0
chr3:14410453|14410602 hsa-miR-5787 1 0 0
chr3:14410453|14410602 hsa-miR-6081 0 1 0
chr3:14410453|14410602 hsa-miR-6086 1 0 0
chr3:14410453|14410602 hsa-miR-6127 1 1 0
chr3:14410453|14410602 hsa-miR-6133 1 0 0
chr3:14410453|14410602 hsa-miR-6745 1 0 0
chr3:14410453|14410602 hsa-miR-12118 0 1 0
chr3:14410453|14410602 hsa-miR-12120 1 0 0
chr3:14410453|14410602 hsa-miR-4433b-3p 1 0 0
chr3:14410453|14410602 hsa-miR-92a-1-5p 0 1 0
chr3:14410453|14410602 hsa-miR-4433a-3p 1 0 0
chr3:14410453|14410602 hsa-miR-671-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6825-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6894-5p 1 0 0
chr3:14410453|14410602 hsa-miR-4687-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6799-5p 1 0 0
chr3:14410453|14410602 hsa-miR-8071 1 0 0
chr3:14410453|14410602 hsa-miR-6833-5p 1 1 0
chr3:14410453|14410602 hsa-miR-6515-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6757-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6880-5p 1 0 0
chr3:14410453|14410602 hsa-miR-7847-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6746-5p 1 1 0
chr3:14410453|14410602 hsa-miR-3187-3p 1 0 0
chr3:14410453|14410602 hsa-miR-23b-5p 0 1 0
chr3:14410453|14410602 hsa-miR-197-5p 1 0 0
chr3:14410453|14410602 hsa-miR-8069 1 0 0
chr3:14410453|14410602 hsa-miR-432-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6716-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6748-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6793-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6796-5p 1 0 0
chr3:14410453|14410602 hsa-miR-185-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6829-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6732-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3190-3p 1 1 0
chr3:14410453|14410602 hsa-miR-23a-5p 0 1 0
chr3:14410453|14410602 hsa-miR-6760-5p 1 1 0
chr3:14410453|14410602 hsa-miR-6782-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6821-5p 1 0 0
chr3:14410453|14410602 hsa-miR-7855-5p 0 1 0
chr3:14410453|14410602 hsa-miR-615-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6786-5p 1 0 0
chr3:14410453|14410602 hsa-miR-5088-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3944-3p 1 0 0
chr3:14410453|14410602 hsa-miR-1229-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1908-5p 1 0 0
chr3:14410453|14410602 hsa-let-7b-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6823-5p 1 0 0
chr3:14410453|14410602 hsa-miR-92b-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3677-3p 1 0 0
chr3:14410453|14410602 hsa-miR-4446-3p 1 1 0
chr3:14410453|14410602 hsa-miR-149-3p 1 0 0
chr3:14410453|14410602 hsa-miR-3162-5p 1 1 0
chr3:14410453|14410602 hsa-miR-6802-5p 1 0 0
chr3:14410453|14410602 hsa-let-7c-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3158-3p 0 1 0
chr3:14410453|14410602 hsa-miR-7158-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1207-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1233-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1273h-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3689b-3p 1 0 0
chr3:14410453|14410602 hsa-miR-4763-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6769b-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6778-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6812-5p 1 0 0
chr3:14410453|14410602 hsa-miR-5001-5p 1 1 0
chr3:14410453|14410602 hsa-miR-6726-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6743-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6756-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6769a-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6813-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6819-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6842-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6851-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1249-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6763-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6779-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6780a-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6797-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6808-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6879-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3620-5p 1 1 0
chr3:14410453|14410602 hsa-miR-5196-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6780b-5p 1 1 0
chr3:14410453|14410602 hsa-miR-3689a-3p 1 0 0
chr3:14410453|14410602 hsa-miR-4649-5p 1 0 0
chr3:14410453|14410602 hsa-miR-4725-3p 1 0 0
chr3:14410453|14410602 hsa-miR-4745-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6729-5p 1 0 0
chr3:14410453|14410602 hsa-miR-675-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6846-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6848-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6858-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6883-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3187-5p 1 0 0
chr3:14410453|14410602 hsa-miR-6831-5p 1 0 0
chr3:14410453|14410602 hsa-miR-3940-5p 1 0 0
chr3:14410453|14410602 hsa-miR-30c-1-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6758-5p 1 0 0
chr3:14410453|14410602 hsa-miR-1914-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6855-5p 0 1 0
chr3:14410453|14410602 hsa-miR-324-3p 1 0 0
chr3:14410453|14410602 hsa-miR-6891-5p 1 0 0
chr3:14410453|14410602 hsa-miR-9851-5p 0 1 0
chr3:14410453|14410602 hsa-miR-10400-3p 1 0 0
chr3:14410453|14410602 hsa-miR-3059-3p 1 0 0
chr3:14410453|14410602 hsa-miR-7162-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr3:14410453|14410602
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence LLREEAFHCQPNPSPGDHQPSPYLPRSIPCSGQSCSPRSFLSFPGTPSWA
Nucleotide Sequence CTGCTGAGGGAGGAAGCCTTCCATTGCCAGCCCAACCCTTCTCCTGGAGACCACCAGCCCTCTCCCTACCTTCCACGTTCTATTCCATGCAGTGGCCAGAGCTGCTCACCACGCTCCTTCTTGAGCTTTCCAGGAACCCCATCCTGGGCT
CircID chr3:14410453|14410602
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence METTSPLPTFHVLFHAVARAAHHAPS
Nucleotide Sequence CTGGAGACCACCAGCCCTCTCCCTACCTTCCACGTTCTATTCCATGCAGTGGCCAGAGCTGCTCACCACGCTCCTTCTTGA
CircID chr3:14410453|14410602
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MPAQPFSWRPPALSLPSTFYSMQWPELLTTLLLELSRNPILG
Nucleotide Sequence TTGCCAGCCCAACCCTTCTCCTGGAGACCACCAGCCCTCTCCCTACCTTCCACGTTCTATTCCATGCAGTGGCCAGAGCTGCTCACCACGCTCCTTCTTGAGCTTTCCAGGAACCCCATCCTGGGC
CircID chr3:14410453|14410602
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MATAWNRTWKVGRGLVVSRRRVGLAMEGFLPQQ
Nucleotide Sequence CTGGCCACTGCATGGAATAGAACGTGGAAGGTAGGGAGAGGGCTGGTGGTCTCCAGGAGAAGGGTTGGGCTGGCAATGGAAGGCTTCCTCCCTCAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab