CircRNA Information

General Information
circRNA Basic Information
CircID chr3:14486436|14486616
Strand -
CircType exon
Host Gene ENSG00000131389.15;
Algorism CIRI2;
Sequence CCAAAAGAGAAGGCCTAGGAGAGTTTTCTAGAAGGTTGGGATTGTCAGGGTCCTGGCCCCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGAAGGTACTATACCTTTCAAATCCCCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:14486436|14486616 hsa-miR-346 0 0 1
chr3:14486436|14486616 hsa-miR-488-5p 0 0 1
chr3:14486436|14486616 hsa-miR-488-3p 0 0 1
chr3:14486436|14486616 hsa-miR-504-5p 0 0 1
chr3:14486436|14486616 hsa-miR-504-3p 0 0 1
chr3:14486436|14486616 hsa-miR-575 0 0 1
chr3:14486436|14486616 hsa-miR-632 0 1 1
chr3:14486436|14486616 hsa-miR-874-5p 0 0 1
chr3:14486436|14486616 hsa-miR-874-3p 0 0 1
chr3:14486436|14486616 hsa-miR-942-5p 0 0 1
chr3:14486436|14486616 hsa-miR-942-3p 0 0 1
chr3:14486436|14486616 hsa-miR-1293 1 0 1
chr3:14486436|14486616 hsa-miR-548m 0 0 1
chr3:14486436|14486616 hsa-miR-146b-3p 0 0 1
chr3:14486436|14486616 hsa-miR-423-5p 0 1 1
chr3:14486436|14486616 hsa-miR-767-3p 0 0 1
chr3:14486436|14486616 hsa-miR-324-3p 0 0 1
chr3:14486436|14486616 hsa-miR-518d-5p 0 0 1
chr3:14486436|14486616 hsa-miR-519b-5p 0 0 1
chr3:14486436|14486616 hsa-miR-519c-5p 0 0 1
chr3:14486436|14486616 hsa-miR-520c-5p 0 0 1
chr3:14486436|14486616 hsa-miR-526a 0 0 1
chr3:14486436|14486616 hsa-miR-1826 0 0 1
chr3:14486436|14486616 hsa-miR-608 1 0 0
chr3:14486436|14486616 hsa-miR-637 1 0 0
chr3:14486436|14486616 hsa-miR-762 1 1 0
chr3:14486436|14486616 hsa-miR-4322 1 0 0
chr3:14486436|14486616 hsa-miR-4265 1 0 0
chr3:14486436|14486616 hsa-miR-4277 0 1 0
chr3:14486436|14486616 hsa-miR-4278 1 0 0
chr3:14486436|14486616 hsa-miR-3650 0 1 0
chr3:14486436|14486616 hsa-miR-4450 1 1 0
chr3:14486436|14486616 hsa-miR-4455 0 1 0
chr3:14486436|14486616 hsa-miR-4492 0 1 0
chr3:14486436|14486616 hsa-miR-4498 1 1 0
chr3:14486436|14486616 hsa-miR-4505 0 1 0
chr3:14486436|14486616 hsa-miR-4507 1 0 0
chr3:14486436|14486616 hsa-miR-1587 1 0 0
chr3:14486436|14486616 hsa-miR-4741 1 0 0
chr3:14486436|14486616 hsa-miR-5194 1 0 0
chr3:14486436|14486616 hsa-miR-5572 1 0 0
chr3:14486436|14486616 hsa-miR-5787 1 1 0
chr3:14486436|14486616 hsa-miR-6085 1 1 0
chr3:14486436|14486616 hsa-miR-8077 1 0 0
chr3:14486436|14486616 hsa-miR-12119 0 1 0
chr3:14486436|14486616 hsa-miR-135a-3p 1 0 0
chr3:14486436|14486616 hsa-miR-4747-3p 1 0 0
chr3:14486436|14486616 hsa-miR-92a-2-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6857-5p 0 1 0
chr3:14486436|14486616 hsa-miR-4687-3p 1 0 0
chr3:14486436|14486616 hsa-miR-6741-5p 1 0 0
chr3:14486436|14486616 hsa-miR-5589-5p 0 1 0
chr3:14486436|14486616 hsa-miR-659-3p 0 1 0
chr3:14486436|14486616 hsa-miR-4725-5p 0 1 0
chr3:14486436|14486616 hsa-miR-185-3p 1 0 0
chr3:14486436|14486616 hsa-miR-6732-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6782-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6728-3p 0 1 0
chr3:14486436|14486616 hsa-miR-5008-5p 1 0 0
chr3:14486436|14486616 hsa-miR-4733-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6786-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6852-5p 0 1 0
chr3:14486436|14486616 hsa-miR-7109-5p 0 1 0
chr3:14486436|14486616 hsa-miR-1229-5p 1 0 0
chr3:14486436|14486616 hsa-miR-4640-5p 0 1 0
chr3:14486436|14486616 hsa-miR-1228-5p 1 0 0
chr3:14486436|14486616 hsa-miR-296-3p 1 0 0
chr3:14486436|14486616 hsa-miR-6824-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6789-5p 1 0 0
chr3:14486436|14486616 hsa-miR-7160-3p 0 1 0
chr3:14486436|14486616 hsa-miR-6769b-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6787-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6816-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6726-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6737-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6743-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6752-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6756-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6769a-5p 1 0 0
chr3:14486436|14486616 hsa-miR-6803-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6813-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6842-5p 1 1 0
chr3:14486436|14486616 hsa-miR-7110-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6751-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6779-5p 1 0 0
chr3:14486436|14486616 hsa-miR-320a-5p 0 1 0
chr3:14486436|14486616 hsa-miR-3620-5p 1 0 0
chr3:14486436|14486616 hsa-miR-10526-3p 1 0 0
chr3:14486436|14486616 hsa-miR-1909-3p 1 0 0
chr3:14486436|14486616 hsa-miR-4701-3p 1 0 0
chr3:14486436|14486616 hsa-miR-4726-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6846-5p 1 1 0
chr3:14486436|14486616 hsa-miR-6848-5p 1 1 0
chr3:14486436|14486616 hsa-miR-3940-5p 1 0 0
chr3:14486436|14486616 hsa-miR-4700-5p 0 1 0
chr3:14486436|14486616 hsa-miR-4472 1 1 0
chr3:14486436|14486616 hsa-miR-4667-5p 0 1 0
chr3:14486436|14486616 hsa-miR-3184-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6791-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6753-3p 1 0 0
chr3:14486436|14486616 hsa-miR-6783-3p 0 1 0
chr3:14486436|14486616 hsa-miR-4676-5p 0 1 0
chr3:14486436|14486616 hsa-miR-6874-3p 0 1 0
chr3:14486436|14486616 hsa-miR-4724-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:14486436|14486616
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MAPQNWLDQGPYVEQRLSLNQERRYYTFQIPRADTPPPSPYLD
Nucleotide Sequence CTGGCCCCTCAGAACTGGCTTGATCAAGGGCCTTATGTGGAGCAGAGGTTGTCTCTGAACCAGGAGAGAAGGTACTATACCTTTCAAATCCCCAGGGCAGACACACCCCCACCCAGCCCCTATTTGGAC
CircID chr3:14486436|14486616
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MKGIVPSLLVQRQPLLHIRPLIKPVLRGQDPDNPNLLENSPRPSLL
Nucleotide Sequence TTGAAAGGTATAGTACCTTCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGTTCTGAGGGGCCAGGACCCTGACAATCCCAACCTTCTAGAAAACTCTCCTAGGCCTTCTCTTTTG
CircID chr3:14486436|14486616
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MPWGFERYSTFSPGSETTSAPHKALDQASSEGPGP
Nucleotide Sequence CTGCCCTGGGGATTTGAAAGGTATAGTACCTTCTCTCCTGGTTCAGAGACAACCTCTGCTCCACATAAGGCCCTTGATCAAGCCAGTTCTGAGGGGCCAGGACCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab