CircRNA Information

General Information
circRNA Basic Information
CircID chr3:14487334|14487593
Strand +
CircType exon
Host Gene ENSG00000131389.15;
Algorism CIRI2;
Sequence CCCCTCGCTTCCTTTCCAGATCTGGCTGGCTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATACGGAGACATGAAGGTTGAGCATTATTACACAGGTACTCGCAGAGCTATGCTCTGCACACAGAGCCAGGGCTGGCTGGGCGAGAGGGCTCTGATTGGAGACAGGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:14487334|14487593 hsa-miR-205-5p 0 0 1
chr3:14487334|14487593 hsa-miR-205-3p 0 0 1
chr3:14487334|14487593 hsa-miR-149-5p 0 0 1
chr3:14487334|14487593 hsa-miR-149-3p 0 0 1
chr3:14487334|14487593 hsa-miR-155-5p 0 0 1
chr3:14487334|14487593 hsa-miR-155-3p 0 0 1
chr3:14487334|14487593 hsa-miR-412-5p 0 0 1
chr3:14487334|14487593 hsa-miR-412-3p 0 0 1
chr3:14487334|14487593 hsa-miR-587 0 0 1
chr3:14487334|14487593 hsa-miR-760 1 0 1
chr3:14487334|14487593 hsa-miR-1299 0 0 1
chr3:14487334|14487593 hsa-miR-875-3p 0 0 1
chr3:14487334|14487593 hsa-miR-769-3p 0 0 1
chr3:14487334|14487593 hsa-miR-450b-3p 0 0 1
chr3:14487334|14487593 hsa-miR-515-5p 0 1 1
chr3:14487334|14487593 hsa-miR-1233 0 0 1
chr3:14487334|14487593 hsa-miR-544 0 0 1
chr3:14487334|14487593 hsa-miR-608 1 0 0
chr3:14487334|14487593 hsa-miR-762 1 0 0
chr3:14487334|14487593 hsa-miR-3651 0 1 0
chr3:14487334|14487593 hsa-miR-4421 0 1 0
chr3:14487334|14487593 hsa-miR-4651 1 0 0
chr3:14487334|14487593 hsa-miR-5680 0 1 0
chr3:14487334|14487593 hsa-miR-6068 0 1 0
chr3:14487334|14487593 hsa-miR-7705 0 1 0
chr3:14487334|14487593 hsa-miR-8057 0 1 0
chr3:14487334|14487593 hsa-miR-8075 0 1 0
chr3:14487334|14487593 hsa-miR-1233-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6892-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6807-5p 1 0 0
chr3:14487334|14487593 hsa-miR-4728-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6742-5p 1 0 0
chr3:14487334|14487593 hsa-miR-6782-5p 1 0 0
chr3:14487334|14487593 hsa-miR-3156-5p 0 1 0
chr3:14487334|14487593 hsa-miR-6765-3p 1 0 0
chr3:14487334|14487593 hsa-miR-3194-5p 0 1 0
chr3:14487334|14487593 hsa-miR-6735-3p 1 0 0
chr3:14487334|14487593 hsa-miR-6858-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6740-5p 0 1 0
chr3:14487334|14487593 hsa-miR-3925-3p 0 1 0
chr3:14487334|14487593 hsa-miR-4687-5p 0 1 0
chr3:14487334|14487593 hsa-miR-6804-3p 0 1 0
chr3:14487334|14487593 hsa-miR-3614-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6501-3p 0 1 0
chr3:14487334|14487593 hsa-miR-335-3p 0 1 0
chr3:14487334|14487593 hsa-miR-3670 0 1 0
chr3:14487334|14487593 hsa-miR-6779-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6847-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6838-3p 0 1 0
chr3:14487334|14487593 hsa-miR-6803-5p 1 0 0
chr3:14487334|14487593 hsa-miR-6754-3p 1 1 0
chr3:14487334|14487593 hsa-miR-3620-5p 1 0 0
chr3:14487334|14487593 hsa-miR-5196-5p 0 1 0
chr3:14487334|14487593 hsa-miR-4646-5p 0 1 0
chr3:14487334|14487593 hsa-miR-6862-3p 1 0 0
chr3:14487334|14487593 hsa-miR-5699-3p 0 1 0
chr3:14487334|14487593 hsa-miR-519e-5p 0 1 0
chr3:14487334|14487593 hsa-miR-6507-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:14487334|14487593
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSIITQVLAELCSAHRARAGWARGL
Nucleotide Sequence TTGAGCATTATTACACAGGTACTCGCAGAGCTATGCTCTGCACACAGAGCCAGGGCTGGCTGGGCGAGAGGGCTCTGA

CircID chr3:14487334|14487593
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MPILYRQVDQSHELSWKVSFIRRHEG
Nucleotide Sequence TTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATACGGAGACATGAAGGTTGA

CircID chr3:14487334|14487593
ORF Type ORF3
Protein Length 77
Nucleotide Length 231
Protein Sequence MGYVRASAFLTHPKQKAGEGLCPFSIDRWTRVMSSHGKFRLYGDMKVEHYYTGTRRAMLCTQSQGWLGERALIGDRC
Nucleotide Sequence CTGGGCTATGTGCGGGCATCAGCATTTCTGACCCATCCCAAGCAGAAAGCAGGTGAAGGACTTTGCCCATTCTCTATAGACAGGTGGACCAGAGTCATGAGCTCTCATGGAAAGTTTCGTTTATACGGAGACATGAAGGTTGAGCATTATTACACAGGTACTCGCAGAGCTATGCTCTGCACACAGAGCCAGGGCTGGCTGGGCGAGAGGGCTCTGATTGGAGACAGGTGC

CircID chr3:14487334|14487593
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MRAHDSGPPVYREWAKSFTCFLLGMGQKC
Nucleotide Sequence ATGAGAGCTCATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGA

CircID chr3:14487334|14487593
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MSPIRALSPSQPWLCVQSIALRVPV
Nucleotide Sequence CTGTCTCCAATCAGAGCCCTCTCGCCCAGCCAGCCCTGGCTCTGTGTGCAGAGCATAGCTCTGCGAGTACCTGTGTAA

CircID chr3:14487334|14487593
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MTLVHLSIENGQSPSPAFCLGWVRNADART
Nucleotide Sequence ATGACTCTGGTCCACCTGTCTATAGAGAATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAG

CircID chr3:14487334|14487593
ORF Type ORF7
Protein Length 33
Nucleotide Length 99
Protein Sequence MGKVLHLLSAWDGSEMLMPAHSPASQIWKGSEG
Nucleotide Sequence ATGGGCAAAGTCCTTCACCTGCTTTCTGCTTGGGATGGGTCAGAAATGCTGATGCCCGCACATAGCCCAGCCAGCCAGATCTGGAAAGGAAGCGAGGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites