CircRNA Information

General Information
circRNA Basic Information
CircID chr3:149287674|149287822
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence GATACAGCAGAGAAAGAGAGAAGAGGAACATTTGAACGCCGAGAGGAGTTCAGCCGAGGGTGGTCGGAGAGGTTTGGCCACCCAGCAGGAAGATTATCTTCCCGTGCCATCCCCGCTTCCAGCTCTGCATCCATCCTTCAGAGAACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:149287674|149287822 hsa-miR-183-5p 0 0 1
chr3:149287674|149287822 hsa-miR-183-3p 0 0 1
chr3:149287674|149287822 hsa-miR-370-5p 0 0 1
chr3:149287674|149287822 hsa-miR-370-3p 0 0 1
chr3:149287674|149287822 hsa-miR-564 0 0 1
chr3:149287674|149287822 hsa-miR-607 0 0 1
chr3:149287674|149287822 hsa-miR-942-5p 0 0 1
chr3:149287674|149287822 hsa-miR-942-3p 0 0 1
chr3:149287674|149287822 hsa-miR-1293 0 0 1
chr3:149287674|149287822 hsa-miR-1252-5p 0 0 1
chr3:149287674|149287822 hsa-miR-1252-3p 0 0 1
chr3:149287674|149287822 hsa-miR-1307-5p 0 0 1
chr3:149287674|149287822 hsa-miR-1307-3p 0 0 1
chr3:149287674|149287822 hsa-miR-671-5p 0 0 1
chr3:149287674|149287822 hsa-miR-542-5p 0 0 1
chr3:149287674|149287822 hsa-miR-105 0 0 1
chr3:149287674|149287822 hsa-miR-608 1 0 0
chr3:149287674|149287822 hsa-miR-638 1 0 0
chr3:149287674|149287822 hsa-miR-663a 1 0 0
chr3:149287674|149287822 hsa-miR-4326 1 1 0
chr3:149287674|149287822 hsa-miR-2392 0 1 0
chr3:149287674|149287822 hsa-miR-4525 1 0 0
chr3:149287674|149287822 hsa-miR-1587 1 0 0
chr3:149287674|149287822 hsa-miR-4663 0 1 0
chr3:149287674|149287822 hsa-miR-4706 1 1 0
chr3:149287674|149287822 hsa-miR-4739 1 0 0
chr3:149287674|149287822 hsa-miR-4754 1 0 0
chr3:149287674|149287822 hsa-miR-6090 1 0 0
chr3:149287674|149287822 hsa-miR-6132 1 0 0
chr3:149287674|149287822 hsa-miR-6745 0 1 0
chr3:149287674|149287822 hsa-miR-12113 0 1 0
chr3:149287674|149287822 hsa-miR-12119 1 1 0
chr3:149287674|149287822 hsa-miR-6765-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6894-5p 1 1 0
chr3:149287674|149287822 hsa-miR-6857-5p 1 0 0
chr3:149287674|149287822 hsa-miR-3622a-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6089 1 0 0
chr3:149287674|149287822 hsa-miR-6757-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6741-5p 1 0 0
chr3:149287674|149287822 hsa-miR-3622b-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4655-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6776-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6873-3p 0 1 0
chr3:149287674|149287822 hsa-miR-3605-5p 1 0 0
chr3:149287674|149287822 hsa-miR-877-3p 1 1 0
chr3:149287674|149287822 hsa-miR-185-3p 1 0 0
chr3:149287674|149287822 hsa-miR-6732-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4753-3p 0 1 0
chr3:149287674|149287822 hsa-miR-6782-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4436b-5p 1 0 0
chr3:149287674|149287822 hsa-miR-7109-3p 0 1 0
chr3:149287674|149287822 hsa-miR-3127-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4732-5p 1 1 0
chr3:149287674|149287822 hsa-miR-6809-3p 1 1 0
chr3:149287674|149287822 hsa-miR-6780a-3p 1 0 0
chr3:149287674|149287822 hsa-miR-4787-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4446-3p 1 0 0
chr3:149287674|149287822 hsa-miR-5010-5p 1 0 0
chr3:149287674|149287822 hsa-miR-3678-3p 0 1 0
chr3:149287674|149287822 hsa-miR-597-3p 1 1 0
chr3:149287674|149287822 hsa-miR-3074-5p 0 1 0
chr3:149287674|149287822 hsa-miR-130b-5p 0 1 0
chr3:149287674|149287822 hsa-miR-6800-3p 0 1 0
chr3:149287674|149287822 hsa-miR-1207-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4763-3p 1 0 0
chr3:149287674|149287822 hsa-miR-5001-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6851-5p 1 0 0
chr3:149287674|149287822 hsa-miR-7110-5p 1 0 0
chr3:149287674|149287822 hsa-miR-3127-3p 1 0 0
chr3:149287674|149287822 hsa-miR-3620-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6780b-5p 1 0 0
chr3:149287674|149287822 hsa-miR-6836-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4685-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4749-5p 1 1 0
chr3:149287674|149287822 hsa-miR-6777-5p 1 0 0
chr3:149287674|149287822 hsa-miR-939-5p 1 0 0
chr3:149287674|149287822 hsa-miR-4781-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:149287674|149287822
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MNAERSSAEGGRRGLATQQEDYLPVPSPLPALHPSFREP
Nucleotide Sequence TTGAACGCCGAGAGGAGTTCAGCCGAGGGTGGTCGGAGAGGTTTGGCCACCCAGCAGGAAGATTATCTTCCCGTGCCATCCCCGCTTCCAGCTCTGCATCCATCCTTCAGAGAACCA

CircID chr3:149287674|149287822
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MDAELEAGMAREDNLPAGWPNLSDHPRLNSSRRSNVPLLSFSAV
Nucleotide Sequence ATGGATGCAGAGCTGGAAGCGGGGATGGCACGGGAAGATAATCTTCCTGCTGGGTGGCCAAACCTCTCCGACCACCCTCGGCTGAACTCCTCTCGGCGTTCAAATGTTCCTCTTCTCTCTTTCTCTGCTGTA

CircID chr3:149287674|149287822
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MQSWKRGWHGKIIFLLGGQTSPTTLG
Nucleotide Sequence ATGCAGAGCTGGAAGCGGGGATGGCACGGGAAGATAATCTTCCTGCTGGGTGGCCAAACCTCTCCGACCACCCTCGGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites