CircNet

General Information

circRNA Basic Information

CircID	chr3:149656876\|149669891
Strand	-
CircType	exon
Host Gene	ENSG00000018408.14;
Algorism	CIRI2;
Sequence	AAGATGAATCCGGCCTCGGCGCCCCCTCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCCGAAGCCTAGCTCGTGGCGGAAGAAGATCCTGCCGGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTCCTACGACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGGGAGATGACCTTCACGGCCACTGGCCAGAGGTACTTCCTCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:149656876\|149669891	hsa-miR-215-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:149656876\|149669891
ORF Type	ORF1
Protein Length	143
Nucleotide Length	429
Protein Sequence	MNPASAPPPLPPPGQQVIHVTQDLDTDLEALFNSVMNPKPSSWRKKILPESFFKEPDSGSHSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGSPAQQHAHLRQQSYDVTDELPLPPGWEMTFTATGQRYFL
Nucleotide Sequence	ATGAATCCGGCCTCGGCGCCCCCTCCGCTCCCGCCGCCTGGGCAGCAAGTGATCCACGTCACGCAGGACCTAGACACAGACCTCGAAGCCCTCTTCAACTCTGTCATGAATCCGAAGCCTAGCTCGTGGCGGAAGAAGATCCTGCCGGAGTCTTTCTTTAAGGAGCCTGATTCGGGCTCGCACTCGCGCCAGTCCAGCACCGACTCGTCGGGCGGCCACCCGGGGCCTCGACTGGCTGGGGGTGCCCAGCATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTCCTACGACGTGACCGACGAGCTGCCACTGCCCCCGGGCTGGGAGATGACCTTCACGGCCACTGGCCAGAGGTACTTCCTC

CircID	chr3:149656876\|149669891
ORF Type	ORF2
Protein Length	61
Nucleotide Length	183
Protein Sequence	MLGTPSQSRPRVAARRVGAGLARVRARIRLLKERLRQDLLPPRARLRIHDRVEEGFEVCV*
Nucleotide Sequence	ATGCTGGGCACCCCCAGCCAGTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTGCGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCCGGCAGGATCTTCTTCCGCCACGAGCTAGGCTTCGGATTCATGACAGAGTTGAAGAGGGCTTCGAGGTCTGTGTCTAG

CircID	chr3:149656876\|149669891
ORF Type	ORF3
Protein Length	98
Nucleotide Length	294
Protein Sequence	VPSCRDAGDECERTCWAPPASRGPGWPPDESVLDWRECEPESGSLKKDSGRIFFRHELGFGFMTELKRASRSVSRSCVTWITCCPGGGSGGGAEAGFI
Nucleotide Sequence	GTGCCCAGCTGCAGGGACGCGGGCGACGAGTGCGAGCGGACATGCTGGGCACCCCCAGCCAGTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTGCGAGCCCGAATCAGGCTCCTTAAAGAAAGACTCCGGCAGGATCTTCTTCCGCCACGAGCTAGGCTTCGGATTCATGACAGAGTTGAAGAGGGCTTCGAGGTCTGTGTCTAGGTCCTGCGTGACGTGGATCACTTGCTGCCCAGGCGGCGGGAGCGGAGGGGGCGCCGAGGCCGGATTCATC

CircID	chr3:149656876\|149669891
ORF Type	ORF4
Protein Length	37
Nucleotide Length	111
Protein Sequence	MSARTRRPRPCSWAPARVLRVAPRSSTRTSASSPTT*
Nucleotide Sequence	ATGTCCGCTCGCACTCGTCGCCCGCGTCCCTGCAGCTGGGCACCGGCGCGGGTGCTGCGGGTAGCCCCGCGCAGCAGCACGCGCACCTCCGCCAGCAGTCCTACGACGTGA

CircID	chr3:149656876\|149669891
ORF Type	ORF5
Protein Length	73
Nucleotide Length	219
Protein Sequence	VAARRSRRRTAGGGARAAARGYPQHPRRCPAAGTRATSASGHAGHPQPVEAPGGRPTSRCWTGASASPNQAP*
Nucleotide Sequence	GTGGCAGCTCGTCGGTCACGTCGTAGGACTGCTGGCGGAGGTGCGCGTGCTGCTGCGCGGGGCTACCCGCAGCACCCGCGCCGGTGCCCAGCTGCAGGGACGCGGGCGACGAGTGCGAGCGGACATGCTGGGCACCCCCAGCCAGTCGAGGCCCCGGGTGGCCGCCCGACGAGTCGGTGCTGGACTGGCGCGAGTGCGAGCCCGAATCAGGCTCCTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:149656876\|149669891	ELAVL1	0	0	3
chr3:149656876\|149669891	NUMA1	0	1	0
chr3:149656876\|149669891	SF3B4	0	0	1
chr3:149656876\|149669891	FKBP4	0	1	0
chr3:149656876\|149669891	PRPF8	0	2	1
chr3:149656876\|149669891	TAF15	0	2	0
chr3:149656876\|149669891	FMR1	0	1	2
chr3:149656876\|149669891	FUS	0	1	0
chr3:149656876\|149669891	DGCR8	0	1	0
chr3:149656876\|149669891	SRSF7	0	4	4
chr3:149656876\|149669891	SRSF1	0	2	6
chr3:149656876\|149669891	NOP58	0	2	2
chr3:149656876\|149669891	U2AF1	0	0	2
chr3:149656876\|149669891	U2AF2	0	13	1
chr3:149656876\|149669891	SRSF9	0	0	2
chr3:149656876\|149669891	HNRNPU	1	13	0
chr3:149656876\|149669891	HNRNPM	0	1	0
chr3:149656876\|149669891	FIP1L1	0	1	0
chr3:149656876\|149669891	PTBP1	0	3	1
chr3:149656876\|149669891	HNRNPC	0	21	0
chr3:149656876\|149669891	TRA2A	0	2	0
chr3:149656876\|149669891	LARP7	0	0	1
chr3:149656876\|149669891	SMNDC1	0	1	0
chr3:149656876\|149669891	MSI1	0	1	0
chr3:149656876\|149669891	HNRNPA1	0	5	0
chr3:149656876\|149669891	BCCIP	0	1	0
chr3:149656876\|149669891	SND1	0	0	2
chr3:149656876\|149669891	IGF2BP1	0	2	4
chr3:149656876\|149669891	IGF2BP3	0	0	4
chr3:149656876\|149669891	IGF2BP2	0	1	4
chr3:149656876\|149669891	HNRNPUL1	0	1	0
chr3:149656876\|149669891	TARDBP	0	12	0
chr3:149656876\|149669891	BUD13	0	1	4
chr3:149656876\|149669891	RBFOX2	0	1	0
chr3:149656876\|149669891	RBM47	0	1	0
chr3:149656876\|149669891	CSTF2T	0	1	0
chr3:149656876\|149669891	CSTF2	1	7	0
chr3:149656876\|149669891	FBL	0	0	2
chr3:149656876\|149669891	EWSR1	0	0	1
chr3:149656876\|149669891	EIF4A3	0	6	5
chr3:149656876\|149669891	AGO2	0	4	2

CircRNA Information