CircNet

General Information

circRNA Basic Information

CircID	chr3:171123596\|171194635
Strand	-
CircType	exon
Host Gene	ENSG00000154310.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTGGTGATGGAGTTTTGTGGTGCTGGCTCTGTCACCGACCTGATCAAGAACACAAAAGGTAACACGTTGAAAGAGGAGTGGATTGCATACATCTGCAGGGAAATCTTACGGGGGCTGAGTCACCTGCACCAGCATAAAGTGATTCATCGAGATATTAAAGGGCAAAATGTCTTGCTGACTGAAAATGCAGAAGTTAAACTAGGTGCCTCAAAGAACAACTTCTATATCCCCAGCATTAGCCAGAAAGAATTCTCCTGGGAATGGTAGTGCTCTGGGACCCAGACTAGGATCTCAACCCATCAGAGCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:171123596\|171194635	hsa-miR-149-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:171123596\|171194635
ORF Type	ORF1
Protein Length	87
Nucleotide Length	261
Protein Sequence	MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLGASKNNFYIPSISQKEFSWEW*
Nucleotide Sequence	ATGGAGTTTTGTGGTGCTGGCTCTGTCACCGACCTGATCAAGAACACAAAAGGTAACACGTTGAAAGAGGAGTGGATTGCATACATCTGCAGGGAAATCTTACGGGGGCTGAGTCACCTGCACCAGCATAAAGTGATTCATCGAGATATTAAAGGGCAAAATGTCTTGCTGACTGAAAATGCAGAAGTTAAACTAGGTGCCTCAAAGAACAACTTCTATATCCCCAGCATTAGCCAGAAAGAATTCTCCTGGGAATGGTAG

CircID	chr3:171123596\|171194635
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MYAIHSSFNVLPFVFLIRSVTEPAPQNSIT
Nucleotide Sequence	ATGTATGCAATCCACTCCTCTTTCAACGTGTTACCTTTTGTGTTCTTGATCAGGTCGGTGACAGAGCCAGCACCACAAAACTCCATCACC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:171123596\|171194635	MSI1	0	1	0
chr3:171123596\|171194635	NOP56	0	0	1
chr3:171123596\|171194635	AGO2	0	1	2
chr3:171123596\|171194635	MSI2	0	0	1
chr3:171123596\|171194635	ADAR	1	0	0
chr3:171123596\|171194635	U2AF2	3	0	1
chr3:171123596\|171194635	LIN28B	0	0	1
chr3:171123596\|171194635	FUS	2	1	0
chr3:171123596\|171194635	RBM10	2	0	0
chr3:171123596\|171194635	TROVE2	0	1	0
chr3:171123596\|171194635	TAF15	1	2	0
chr3:171123596\|171194635	NOP58	1	0	0
chr3:171123596\|171194635	IGF2BP2	0	0	2
chr3:171123596\|171194635	YWHAG	0	0	1
chr3:171123596\|171194635	EIF4A3	0	3	4
chr3:171123596\|171194635	FBL	0	0	1

CircRNA Information