CircNet

General Information

circRNA Basic Information

CircID	chr3:171188702\|171194635
Strand	-
CircType	exon
Host Gene	ENSG00000154310.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTGGTGATGGAGTTTTGTGGTGCTGGCTCTGTCACCGACCTGATCAAGAACACAAAAGGTAACACGTTGAAAGAGGAGTGGATTGCATACATCTGCAGGGAAATCTTACGGGGGCTGAGTCACCTGCACCAGCATAAAGTGATTCATCGAGATATTAAAGGGCAAAATGTCTTGCTGACTGAAAATGCAGAAGTTAAACTAGACTTTATTTACTTGTCTTTTCTTAAATAGTGGACTTTGGAGTCAGTGCTCAGCTTGATCGAACAGTGGGCAGGAGGAATACTTTCATTGGAACTCCCTACTGGATGGCACCAGAAGTTATTGCCTGTGATGAAAACCCAGATGCCACATATGATTTCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:171188702\|171194635	hsa-miR-149-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:171188702\|171194635
ORF Type	ORF1
Protein Length	75
Nucleotide Length	225
Protein Sequence	MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLDFIYLSFLK*
Nucleotide Sequence	ATGGAGTTTTGTGGTGCTGGCTCTGTCACCGACCTGATCAAGAACACAAAAGGTAACACGTTGAAAGAGGAGTGGATTGCATACATCTGCAGGGAAATCTTACGGGGGCTGAGTCACCTGCACCAGCATAAAGTGATTCATCGAGATATTAAAGGGCAAAATGTCTTGCTGACTGAAAATGCAGAAGTTAAACTAGACTTTATTTACTTGTCTTTTCTTAAATAG

CircID	chr3:171188702\|171194635
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MYAIHSSFNVLPFVFLIRSVTEPAPQNSIT
Nucleotide Sequence	ATGTATGCAATCCACTCCTCTTTCAACGTGTTACCTTTTGTGTTCTTGATCAGGTCGGTGACAGAGCCAGCACCACAAAACTCCATCACC

CircID	chr3:171188702\|171194635
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	LEIICGIWVFITGNNFWCHPVGSSNESIPPAHCSIKLSTDSKVHYLRKDK*
Nucleotide Sequence	CTTGAAATCATATGTGGCATCTGGGTTTTCATCACAGGCAATAACTTCTGGTGCCATCCAGTAGGGAGTTCCAATGAAAGTATTCCTCCTGCCCACTGTTCGATCAAGCTGAGCACTGACTCCAAAGTCCACTATTTAAGAAAAGACAAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:171188702\|171194635	ELAVL1	0	3	0
chr3:171188702\|171194635	CELF2	0	2	0
chr3:171188702\|171194635	PRPF8	0	2	0
chr3:171188702\|171194635	TAF15	1	0	0
chr3:171188702\|171194635	CPSF7	0	1	0
chr3:171188702\|171194635	NUDT21	0	1	0
chr3:171188702\|171194635	FUS	2	1	0
chr3:171188702\|171194635	NOP58	1	0	1
chr3:171188702\|171194635	ADAR	1	0	0
chr3:171188702\|171194635	U2AF2	3	1	1
chr3:171188702\|171194635	RBM10	2	0	0
chr3:171188702\|171194635	HNRNPM	0	1	0
chr3:171188702\|171194635	PTBP1	0	1	0
chr3:171188702\|171194635	HNRNPC	0	0	2
chr3:171188702\|171194635	TRA2A	0	0	1
chr3:171188702\|171194635	ZC3H7B	0	1	0
chr3:171188702\|171194635	LIN28B	0	2	3
chr3:171188702\|171194635	IGF2BP3	0	1	0
chr3:171188702\|171194635	IGF2BP2	0	0	2
chr3:171188702\|171194635	TARDBP	0	1	0
chr3:171188702\|171194635	RBFOX2	0	1	0
chr3:171188702\|171194635	CSTF2	0	1	0
chr3:171188702\|171194635	TIAL1	0	1	0
chr3:171188702\|171194635	FBL	0	1	1
chr3:171188702\|171194635	ATXN2	0	2	0
chr3:171188702\|171194635	EIF4A3	0	2	5
chr3:171188702\|171194635	AGO2	0	0	1

CircRNA Information