CircNet

General Information

circRNA Basic Information

CircID	chr3:172112452\|172112590
Strand	+
CircType	exon
Host Gene	ENSG00000075420.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAGCCAGTTGAGGGAAGTTCTCCATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:172112452\|172112590	hsa-let-7b-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7b-3p	0	0	1
chr3:172112452\|172112590	hsa-let-7c-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7c-3p	0	0	1
chr3:172112452\|172112590	hsa-let-7d-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7d-3p	0	0	1
chr3:172112452\|172112590	hsa-let-7e-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7e-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-98-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-98-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-214-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-214-3p	0	0	1
chr3:172112452\|172112590	hsa-let-7g-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7g-3p	0	0	1
chr3:172112452\|172112590	hsa-let-7i-5p	0	0	1
chr3:172112452\|172112590	hsa-let-7i-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-136-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-136-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-575	0	1	1
chr3:172112452\|172112590	hsa-miR-598-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-598-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-605-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-605-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-620	0	0	1
chr3:172112452\|172112590	hsa-miR-1301-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-1301-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-887-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-887-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-922	0	0	1
chr3:172112452\|172112590	hsa-miR-1299	0	0	1
chr3:172112452\|172112590	hsa-miR-1257	0	0	1
chr3:172112452\|172112590	hsa-miR-1270	0	0	1
chr3:172112452\|172112590	hsa-miR-1272	0	1	1
chr3:172112452\|172112590	hsa-miR-1322	0	0	1
chr3:172112452\|172112590	hsa-miR-93-3p	0	1	1
chr3:172112452\|172112590	hsa-miR-6514-5p	1	1	1
chr3:172112452\|172112590	hsa-miR-875-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-628-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-515-5p	0	0	1
chr3:172112452\|172112590	hsa-miR-642	0	0	1
chr3:172112452\|172112590	hsa-let-7a	0	0	1
chr3:172112452\|172112590	hsa-let-7f	0	0	1
chr3:172112452\|172112590	hsa-miR-768-3p	0	0	1
chr3:172112452\|172112590	hsa-miR-4458	0	1	0
chr3:172112452\|172112590	hsa-miR-12122	1	0	0
chr3:172112452\|172112590	hsa-miR-6825-5p	1	0	0
chr3:172112452\|172112590	hsa-miR-3677-5p	1	0	0
chr3:172112452\|172112590	hsa-miR-4786-3p	0	1	0
chr3:172112452\|172112590	hsa-miR-4715-3p	0	1	0
chr3:172112452\|172112590	hsa-miR-4758-3p	0	1	0
chr3:172112452\|172112590	hsa-miR-2276-5p	0	1	0
chr3:172112452\|172112590	hsa-miR-6856-5p	0	1	0
chr3:172112452\|172112590	hsa-miR-4676-5p	0	1	0
chr3:172112452\|172112590	hsa-miR-10523-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:172112452\|172112590
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	MNVRHNDDDRPNPSGTATIAERRGSHDAPLGEWRCSSA
Nucleotide Sequence	ATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGCA

CircID	chr3:172112452\|172112590
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGDAAQQ
Nucleotide Sequence	ATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGCAG

CircID	chr3:172112452\|172112590
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MATSPFSNGGSSRGIWSVIIIVTYIHGELPSTGF
Nucleotide Sequence	ATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATGGAGAACTTCCCTCAACTGGCTTC

CircID	chr3:172112452\|172112590
ORF Type	ORF1
Protein Length	46
Nucleotide Length	138
Protein Sequence	LLSCISIHQVGHHGYLSVQQWWQFQRDLVGHHHCDVHSWRTSLNWL
Nucleotide Sequence	CTGCTGAGCTGCATCTCCATTCACCAAGTGGGGCATCATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATGGAGAACTTCCCTCAACTGGCTT

CircID	chr3:172112452\|172112590
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MATSPFSNGGSSRGIWSVIIIVTYIHGELPSTGF
Nucleotide Sequence	ATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGACGTACATTCATGGAGAACTTCCCTCAACTGGCTTC

CircID	chr3:172112452\|172112590
ORF Type	ORF3
Protein Length	31
Nucleotide Length	96
Protein Sequence	MHLHSPSGASWLPLRSAMVAVPEGFGRSSSL
Nucleotide Sequence	CTGCATCTCCATTCACCAAGTGGGGCATCATGGCTACCTCTCCGTTCAGCAATGGTGGCAGTTCCAGAGGGATTTGGTCGGTCATCATCATTGTGA

CircID	chr3:172112452\|172112590
ORF Type	ORF4
Protein Length	38
Nucleotide Length	114
Protein Sequence	MNVRHNDDDRPNPSGTATIAERRGSHDAPLGEWRCSSA
Nucleotide Sequence	ATGAATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGCA

CircID	chr3:172112452\|172112590
ORF Type	ORF5
Protein Length	37
Nucleotide Length	111
Protein Sequence	MYVTMMMTDQIPLELPPLLNGEVAMMPHLVNGDAAQQ
Nucleotide Sequence	ATGTACGTCACAATGATGATGACCGACCAAATCCCTCTGGAACTGCCACCATTGCTGAACGGAGAGGTAGCCATGATGCCCCACTTGGTGAATGGAGATGCAGCTCAGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:172112452\|172112590	NOP56	0	1	0
chr3:172112452\|172112590	FUS	1	2	0
chr3:172112452\|172112590	SF3B4	2	0	0
chr3:172112452\|172112590	PRPF8	1	1	0
chr3:172112452\|172112590	FMR1	0	1	0
chr3:172112452\|172112590	DGCR8	1	0	0
chr3:172112452\|172112590	SRSF1	2	0	2
chr3:172112452\|172112590	NOP58	2	0	2
chr3:172112452\|172112590	U2AF2	11	10	0
chr3:172112452\|172112590	SRSF9	1	0	2
chr3:172112452\|172112590	DDX54	0	0	4
chr3:172112452\|172112590	HNRNPM	0	2	0
chr3:172112452\|172112590	SF3A3	2	0	0
chr3:172112452\|172112590	TRA2A	0	0	1
chr3:172112452\|172112590	DDX3X	1	0	0
chr3:172112452\|172112590	SMNDC1	2	0	0
chr3:172112452\|172112590	RANGAP1	1	0	0
chr3:172112452\|172112590	FXR2	1	0	0
chr3:172112452\|172112590	IGF2BP1	0	1	0
chr3:172112452\|172112590	IGF2BP2	3	0	5
chr3:172112452\|172112590	TARDBP	4	3	0
chr3:172112452\|172112590	BUD13	2	0	2
chr3:172112452\|172112590	RBM47	1	0	1
chr3:172112452\|172112590	CSTF2T	0	0	1
chr3:172112452\|172112590	TIAL1	0	1	0
chr3:172112452\|172112590	FBL	1	0	2
chr3:172112452\|172112590	EWSR1	0	1	0
chr3:172112452\|172112590	EIF4A3	5	2	1
chr3:172112452\|172112590	AGO2	0	1	1

CircRNA Information