CircRNA Information

General Information
circRNA Basic Information
CircID chr3:183271281|183271542
Strand -
CircType exon
Host Gene ENSG00000176597.10;
Algorism CIRI2;
Sequence CAAATGAACGTACAGTACAACATTTCAAGGAAATGAATATATTGTTAGACCAGGTAAGCAAGTTTATTTTTGTTAAAGAGCACTTGGTGGAGGTAGTAGGGGCAGGGAAAGGTCAGCATAGGAGAGAAAGTTCATGAATCTGGTAAAACAGTCTCTTGTTCTTAAGAGGAGATGTAGAAAAATGTGTACAATGTTATTATAAACAGACAAATCACGTCTTACCACATCCATGTAGCTACTGGTGTTAGAGTCATTAAAATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:183271281|183271542 hsa-miR-208a-5p 0 0 1
chr3:183271281|183271542 hsa-miR-208a-3p 0 0 1
chr3:183271281|183271542 hsa-miR-221-5p 0 0 1
chr3:183271281|183271542 hsa-miR-221-3p 0 0 1
chr3:183271281|183271542 hsa-miR-222-5p 0 0 1
chr3:183271281|183271542 hsa-miR-222-3p 0 0 1
chr3:183271281|183271542 hsa-miR-302a-5p 0 0 1
chr3:183271281|183271542 hsa-miR-302a-3p 0 0 1
chr3:183271281|183271542 hsa-miR-302b-5p 0 0 1
chr3:183271281|183271542 hsa-miR-302b-3p 0 0 1
chr3:183271281|183271542 hsa-miR-302c-5p 0 0 1
chr3:183271281|183271542 hsa-miR-302c-3p 0 0 1
chr3:183271281|183271542 hsa-miR-302d-5p 0 0 1
chr3:183271281|183271542 hsa-miR-302d-3p 0 0 1
chr3:183271281|183271542 hsa-miR-372-5p 0 0 1
chr3:183271281|183271542 hsa-miR-372-3p 0 0 1
chr3:183271281|183271542 hsa-miR-373-5p 0 0 1
chr3:183271281|183271542 hsa-miR-373-3p 0 0 1
chr3:183271281|183271542 hsa-miR-374a-5p 0 0 1
chr3:183271281|183271542 hsa-miR-374a-3p 0 0 1
chr3:183271281|183271542 hsa-miR-433-5p 0 0 1
chr3:183271281|183271542 hsa-miR-433-3p 0 0 1
chr3:183271281|183271542 hsa-miR-452-5p 0 0 1
chr3:183271281|183271542 hsa-miR-452-3p 0 0 1
chr3:183271281|183271542 hsa-miR-495-5p 0 0 1
chr3:183271281|183271542 hsa-miR-495-3p 0 0 1
chr3:183271281|183271542 hsa-miR-520e-5p 0 0 1
chr3:183271281|183271542 hsa-miR-520e-3p 0 0 1
chr3:183271281|183271542 hsa-miR-520b-5p 0 0 1
chr3:183271281|183271542 hsa-miR-520b-3p 0 0 1
chr3:183271281|183271542 hsa-miR-579-5p 0 0 1
chr3:183271281|183271542 hsa-miR-579-3p 0 0 1
chr3:183271281|183271542 hsa-miR-601 0 0 1
chr3:183271281|183271542 hsa-miR-619-5p 0 0 1
chr3:183271281|183271542 hsa-miR-619-3p 0 0 1
chr3:183271281|183271542 hsa-miR-632 0 0 1
chr3:183271281|183271542 hsa-miR-543 0 0 1
chr3:183271281|183271542 hsa-miR-374b-5p 0 0 1
chr3:183271281|183271542 hsa-miR-374b-3p 0 0 1
chr3:183271281|183271542 hsa-miR-208b-5p 0 0 1
chr3:183271281|183271542 hsa-miR-208b-3p 0 0 1
chr3:183271281|183271542 hsa-miR-1183 0 0 1
chr3:183271281|183271542 hsa-miR-1231 0 0 1
chr3:183271281|183271542 hsa-miR-302e 0 0 1
chr3:183271281|183271542 hsa-miR-502-5p 1 0 1
chr3:183271281|183271542 hsa-miR-490-5p 0 0 1
chr3:183271281|183271542 hsa-miR-338-5p 0 0 1
chr3:183271281|183271542 hsa-miR-628-5p 0 0 1
chr3:183271281|183271542 hsa-miR-409-3p 0 0 1
chr3:183271281|183271542 hsa-miR-324-3p 1 0 1
chr3:183271281|183271542 hsa-miR-520d-3p 0 0 1
chr3:183271281|183271542 hsa-miR-520a-3p 0 0 1
chr3:183271281|183271542 hsa-miR-520c-3p 0 0 1
chr3:183271281|183271542 hsa-miR-548b-3p 0 0 1
chr3:183271281|183271542 hsa-miR-369-3p 0 0 1
chr3:183271281|183271542 hsa-miR-1274a 0 0 1
chr3:183271281|183271542 hsa-miR-664 0 0 1
chr3:183271281|183271542 hsa-miR-203 0 0 1
chr3:183271281|183271542 hsa-miR-346 1 0 0
chr3:183271281|183271542 hsa-miR-1470 1 0 0
chr3:183271281|183271542 hsa-miR-1913 1 0 0
chr3:183271281|183271542 hsa-miR-4641 1 0 0
chr3:183271281|183271542 hsa-miR-4663 1 0 0
chr3:183271281|183271542 hsa-miR-18a-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6747-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4726-3p 1 0 0
chr3:183271281|183271542 hsa-miR-210-5p 1 0 0
chr3:183271281|183271542 hsa-miR-486-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6873-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4728-3p 1 0 0
chr3:183271281|183271542 hsa-miR-7110-3p 1 0 0
chr3:183271281|183271542 hsa-miR-1915-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6845-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4725-5p 1 0 0
chr3:183271281|183271542 hsa-miR-877-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6774-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6882-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4763-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6894-3p 1 0 0
chr3:183271281|183271542 hsa-miR-5001-3p 1 0 0
chr3:183271281|183271542 hsa-miR-7161-3p 1 0 0
chr3:183271281|183271542 hsa-miR-7113-3p 1 0 0
chr3:183271281|183271542 hsa-miR-3191-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6821-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6878-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6809-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6830-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4446-5p 1 0 0
chr3:183271281|183271542 hsa-miR-339-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6825-3p 1 0 0
chr3:183271281|183271542 hsa-miR-1236-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6811-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6889-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6752-3p 1 0 0
chr3:183271281|183271542 hsa-miR-1914-5p 1 0 0
chr3:183271281|183271542 hsa-miR-4749-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6760-3p 1 0 0
chr3:183271281|183271542 hsa-miR-130b-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6748-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4750-3p 1 0 0
chr3:183271281|183271542 hsa-miR-3173-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6759-3p 1 0 0
chr3:183271281|183271542 hsa-miR-3162-3p 1 0 0
chr3:183271281|183271542 hsa-miR-5008-3p 1 0 0
chr3:183271281|183271542 hsa-miR-4722-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6727-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6893-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6801-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6805-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6810-3p 1 0 0
chr3:183271281|183271542 hsa-miR-3059-5p 1 0 0
chr3:183271281|183271542 hsa-miR-6744-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6833-3p 1 0 0
chr3:183271281|183271542 hsa-miR-6737-3p 1 0 0
chr3:183271281|183271542 hsa-miR-3922-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:183271281|183271542
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MNILLDQVSKFIFVKEHLVEVVGAGKGQHRRESS
Nucleotide Sequence ATGAATATATTGTTAGACCAGGTAAGCAAGTTTATTTTTGTTAAAGAGCACTTGGTGGAGGTAGTAGGGGCAGGGAAAGGTCAGCATAGGAGAGAAAGTTCATGA
CircID chr3:183271281|183271542
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MFLRGDVEKCVQCYYKQTNHVLPHPCSYWC
Nucleotide Sequence TTGTTCTTAAGAGGAGATGTAGAAAAATGTGTACAATGTTATTATAAACAGACAAATCACGTCTTACCACATCCATGTAGCTACTGGTGTTAG
CircID chr3:183271281|183271542
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MDVVRRDLSVYNNIVHIFLHLLLRTRDCFTRFMNFLSYADLSLPLLPPPSAL
Nucleotide Sequence ATGGATGTGGTAAGACGTGATTTGTCTGTTTATAATAACATTGTACACATTTTTCTACATCTCCTCTTAAGAACAAGAGACTGTTTTACCAGATTCATGAACTTTCTCTCCTATGCTGACCTTTCCCTGCCCCTACTACCTCCACCAAGTGCTCTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab