CircNet

General Information

circRNA Basic Information

CircID	chr3:183717651\|183722136
Strand	+
CircType	exon
Host Gene	ENSG00000163872.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTCGAGATGCTGCTGTGCAGAAGATTGAGACTATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGGAACATGAAATTGAAGTCATTGACCAGCGACTGATTGAAGCAAGAAGGATGATGGATAAACTGCGTGCCTGCATTGTAGCAAACTACTATGCTTCTGCAGGTCTTCTAAAAGTTTCTGAGGGATCAAAGACATGTGATACAATGGTTTTTAATCATCCTGCTATCAAGAAATTTTTGGAATCACCATCTAGGTCATCATCTCCTGCCAATCAGAGAGCAGAAACACCATCAGCCAATCATTCAGAAAGTGATTCTTTATCTCAGCACAATGACTTCTTATCTGACAAAGATAATAACAGCAATATGGATATAGAGGAAAGACTCTCAAACAACATGGAGCAGAGACCAAGCCGAAATACTGGAAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:183717651\|183722136	hsa-miR-187-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:183717651\|183722136
ORF Type	ORF1
Protein Length	126
Nucleotide Length	378
Protein Sequence	MKNKEHEIEVIDQRLIEARRMMDKLRACIVANYYASAGLLKVSEGSKTCDTMVFNHPAIKKFLESPSRSSSPANQRAETPSANHSESDSLSQHNDFLSDKDNNSNMDIEERLSNNMEQRPSRNTGR
Nucleotide Sequence	ATGAAGAATAAGGAACATGAAATTGAAGTCATTGACCAGCGACTGATTGAAGCAAGAAGGATGATGGATAAACTGCGTGCCTGCATTGTAGCAAACTACTATGCTTCTGCAGGTCTTCTAAAAGTTTCTGAGGGATCAAAGACATGTGATACAATGGTTTTTAATCATCCTGCTATCAAGAAATTTTTGGAATCACCATCTAGGTCATCATCTCCTGCCAATCAGAGAGCAGAAACACCATCAGCCAATCATTCAGAAAGTGATTCTTTATCTCAGCACAATGACTTCTTATCTGACAAAGATAATAACAGCAATATGGATATAGAGGAAAGACTCTCAAACAACATGGAGCAGAGACCAAGCCGAAATACTGGAAGG

CircID	chr3:183717651\|183722136
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MQARSLSIILLASISRWSMTSISCSLFFISRANCSLIIVSIFCTAASR
Nucleotide Sequence	ATGCAGGCACGCAGTTTATCCATCATCCTTCTTGCTTCAATCAGTCGCTGGTCAATGACTTCAATTTCATGTTCCTTATTCTTCATTTCAAGAGCAAACTGTTCTTTGATAATAGTCTCAATCTTCTGCACAGCAGCATCTCGA

CircID	chr3:183717651\|183722136
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MSLIPQKLLEDLQKHSSLLQCRHAVYPSSFLLQSVAGQ*
Nucleotide Sequence	ATGTCTTTGATCCCTCAGAAACTTTTAGAAGACCTGCAGAAGCATAGTAGTTTGCTACAATGCAGGCACGCAGTTTATCCATCATCCTTCTTGCTTCAATCAGTCGCTGGTCAATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:183717651\|183722136	ELAVL1	1	1	0
chr3:183717651\|183722136	ELAVL3	1	0	0
chr3:183717651\|183722136	SF3B4	1	0	0
chr3:183717651\|183722136	CELF2	2	0	0
chr3:183717651\|183722136	TAF15	0	0	1
chr3:183717651\|183722136	FMR1	1	0	2
chr3:183717651\|183722136	CPSF6	0	0	1
chr3:183717651\|183722136	FUS	0	1	0
chr3:183717651\|183722136	GNL3	1	0	1
chr3:183717651\|183722136	SRSF7	0	0	1
chr3:183717651\|183722136	SRSF1	0	0	2
chr3:183717651\|183722136	NOP58	1	0	8
chr3:183717651\|183722136	ADAR	0	1	0
chr3:183717651\|183722136	U2AF2	17	0	3
chr3:183717651\|183722136	DDX54	0	1	11
chr3:183717651\|183722136	HNRNPK	1	0	0
chr3:183717651\|183722136	PTBP1	3	0	2
chr3:183717651\|183722136	HNRNPC	4	1	0
chr3:183717651\|183722136	TRA2A	0	0	4
chr3:183717651\|183722136	HNRNPA1	1	0	0
chr3:183717651\|183722136	SMNDC1	2	0	0
chr3:183717651\|183722136	ACIN1	0	0	4
chr3:183717651\|183722136	LIN28B	0	0	4
chr3:183717651\|183722136	FXR1	0	0	1
chr3:183717651\|183722136	FXR2	0	0	2
chr3:183717651\|183722136	IGF2BP2	1	3	9
chr3:183717651\|183722136	TARDBP	0	0	1
chr3:183717651\|183722136	BUD13	2	0	4
chr3:183717651\|183722136	RBFOX2	1	0	0
chr3:183717651\|183722136	RBM47	0	0	2
chr3:183717651\|183722136	CSTF2T	0	1	1
chr3:183717651\|183722136	AGO2	1	0	0
chr3:183717651\|183722136	EIF4A3	3	2	7
chr3:183717651\|183722136	FBL	1	0	3

CircRNA Information