CircRNA Information

General Information
circRNA Basic Information
CircID chr3:183811256|183811466
Strand +
CircType exon
Host Gene ENSG00000163872.14;
Algorism CIRI2;
Sequence CCCAGAAGAGCCTGCCGGGCGCCGCTCCCCACTGGCCACTCAGCATGGGGTCAGCAGCAGAAGCTCCTGCAGGCCATGCAGATGGCGTGGAACCTGCGATCTGCTTCGCACACATGTGTAACGCTGCTACACTTCTGCCAAGTGTCTGGGACTGGTGCACACAGTCTATTCCTAGCATAGTGAGTTTTCTTGGTTATAATCAAACCTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:183811256|183811466 hsa-miR-15a-5p 0 0 1
chr3:183811256|183811466 hsa-miR-15a-3p 0 0 1
chr3:183811256|183811466 hsa-miR-15b-5p 0 0 1
chr3:183811256|183811466 hsa-miR-15b-3p 0 0 1
chr3:183811256|183811466 hsa-miR-195-5p 0 0 1
chr3:183811256|183811466 hsa-miR-195-3p 0 0 1
chr3:183811256|183811466 hsa-miR-424-5p 0 0 1
chr3:183811256|183811466 hsa-miR-424-3p 0 0 1
chr3:183811256|183811466 hsa-miR-484 0 0 1
chr3:183811256|183811466 hsa-miR-497-5p 0 0 1
chr3:183811256|183811466 hsa-miR-497-3p 0 0 1
chr3:183811256|183811466 hsa-miR-503-5p 0 0 1
chr3:183811256|183811466 hsa-miR-503-3p 0 0 1
chr3:183811256|183811466 hsa-miR-646 0 0 1
chr3:183811256|183811466 hsa-miR-657 0 1 1
chr3:183811256|183811466 hsa-miR-298 0 0 1
chr3:183811256|183811466 hsa-miR-892a 0 0 1
chr3:183811256|183811466 hsa-miR-708-5p 0 0 1
chr3:183811256|183811466 hsa-miR-708-3p 0 0 1
chr3:183811256|183811466 hsa-miR-939-5p 0 0 1
chr3:183811256|183811466 hsa-miR-939-3p 0 0 1
chr3:183811256|183811466 hsa-miR-1205 0 1 1
chr3:183811256|183811466 hsa-miR-1286 0 0 1
chr3:183811256|183811466 hsa-miR-491-5p 0 0 1
chr3:183811256|183811466 hsa-miR-767-5p 0 0 1
chr3:183811256|183811466 hsa-miR-28-5p 0 0 1
chr3:183811256|183811466 hsa-miR-628-5p 0 0 1
chr3:183811256|183811466 hsa-miR-16 0 0 1
chr3:183811256|183811466 hsa-miR-151-3p 0 0 1
chr3:183811256|183811466 hsa-miR-1258 0 1 0
chr3:183811256|183811466 hsa-miR-3146 0 1 0
chr3:183811256|183811466 hsa-miR-3155a 0 1 0
chr3:183811256|183811466 hsa-miR-3155b 0 1 0
chr3:183811256|183811466 hsa-miR-4488 1 0 0
chr3:183811256|183811466 hsa-miR-3960 1 0 0
chr3:183811256|183811466 hsa-miR-6071 0 1 0
chr3:183811256|183811466 hsa-miR-8072 1 0 0
chr3:183811256|183811466 hsa-miR-8077 0 1 0
chr3:183811256|183811466 hsa-miR-9718 0 1 0
chr3:183811256|183811466 hsa-miR-12127 0 1 0
chr3:183811256|183811466 hsa-miR-6089 1 0 0
chr3:183811256|183811466 hsa-miR-3677-5p 0 1 0
chr3:183811256|183811466 hsa-miR-593-5p 0 1 0
chr3:183811256|183811466 hsa-miR-3189-5p 1 0 0
chr3:183811256|183811466 hsa-miR-6776-5p 0 1 0
chr3:183811256|183811466 hsa-miR-1292-5p 1 0 0
chr3:183811256|183811466 hsa-miR-3180-3p 1 0 0
chr3:183811256|183811466 hsa-miR-6815-3p 0 1 0
chr3:183811256|183811466 hsa-miR-6720-3p 1 0 0
chr3:183811256|183811466 hsa-miR-4746-3p 1 0 0
chr3:183811256|183811466 hsa-miR-6789-3p 0 1 0
chr3:183811256|183811466 hsa-miR-10400-5p 1 0 0
chr3:183811256|183811466 hsa-miR-1343-5p 1 1 0
chr3:183811256|183811466 hsa-miR-6763-5p 0 1 0
chr3:183811256|183811466 hsa-miR-1237-5p 1 0 0
chr3:183811256|183811466 hsa-miR-328-5p 1 0 0
chr3:183811256|183811466 hsa-miR-4745-5p 1 0 0
chr3:183811256|183811466 hsa-miR-4758-5p 0 1 0
chr3:183811256|183811466 hsa-miR-6511a-5p 0 1 0
chr3:183811256|183811466 hsa-miR-508-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:183811256|183811466
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MQAMQMAWNLRSASHTCVTLLHFCQVSGTGAHSLFLA
Nucleotide Sequence CTGCAGGCCATGCAGATGGCGTGGAACCTGCGATCTGCTTCGCACACATGTGTAACGCTGCTACACTTCTGCCAAGTGTCTGGGACTGGTGCACACAGTCTATTCCTAGCATAG

CircID chr3:183811256|183811466
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MATQHGVSSRSSCRPCRWRGTCDLLRTHV
Nucleotide Sequence CTGGCCACTCAGCATGGGGTCAGCAGCAGAAGCTCCTGCAGGCCATGCAGATGGCGTGGAACCTGCGATCTGCTTCGCACACATGTGTAA

CircID chr3:183811256|183811466
ORF Type ORF3
Protein Length 66
Nucleotide Length 198
Protein Sequence MPGAAPHWPLSMGSAAEAPAGHADGVEPAICFAHMCNAATLLPSVWDWCTQSIPSIVSFLGYNQTS
Nucleotide Sequence CTGCCGGGCGCCGCTCCCCACTGGCCACTCAGCATGGGGTCAGCAGCAGAAGCTCCTGCAGGCCATGCAGATGGCGTGGAACCTGCGATCTGCTTCGCACACATGTGTAACGCTGCTACACTTCTGCCAAGTGTCTGGGACTGGTGCACACAGTCTATTCCTAGCATAGTGAGTTTTCTTGGTTATAATCAAACCTCT

CircID chr3:183811256|183811466
ORF Type ORF4
Protein Length 59
Nucleotide Length 177
Protein Sequence MLGIDCVHQSQTLGRSVAALHMCAKQIAGSTPSAWPAGASAADPMLSGQWGAAPGRLFW
Nucleotide Sequence ATGCTAGGAATAGACTGTGTGCACCAGTCCCAGACACTTGGCAGAAGTGTAGCAGCGTTACACATGTGTGCGAAGCAGATCGCAGGTTCCACGCCATCTGCATGGCCTGCAGGAGCTTCTGCTGCTGACCCCATGCTGAGTGGCCAGTGGGGAGCGGCGCCCGGCAGGCTCTTCTGG

CircID chr3:183811256|183811466
ORF Type ORF5
Protein Length 50
Nucleotide Length 153
Protein Sequence MIITKKTHYARNRLCAPVPDTWQKCSSVTHVCEADRRFHAICMACRSFCC
Nucleotide Sequence TTGATTATAACCAAGAAAACTCACTATGCTAGGAATAGACTGTGTGCACCAGTCCCAGACACTTGGCAGAAGTGTAGCAGCGTTACACATGTGTGCGAAGCAGATCGCAGGTTCCACGCCATCTGCATGGCCTGCAGGAGCTTCTGCTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites