CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184164539|184164846
Strand +
CircType exon
Host Gene ENSG00000161202.16;
Algorism CIRI2;
Sequence CCCCTGGTTCTCGCCGCCGTTCCCCCTTCGCAGTTCCATTTAGCCGGGTTGCTGCAGGGGATGGAAGCAGTTGGGTTTACACAGTGCCCAGTGCAGGGGTGAAGGAGGGAGAGAGGCAAGCCAGGGGCTGCACTGGGGCCAGGCATATCCTGAGCTCGGGAAGTAGGGCAAGAAGGTGGGTAGCTGGGTGGAAAGTGAGGGGAGGGTGTGAGGTGCGGACAGTGTCCGTGTTCAGGAAGATATACCATGCTCTGGGCCATCCCTCCGGCGTGGCCGCTCTCGCTGGGCAGACACCAAAGAGTCCGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184164539|184164846 hsa-miR-30a-5p 0 0 1
chr3:184164539|184164846 hsa-miR-30a-3p 0 0 1
chr3:184164539|184164846 hsa-miR-107 0 0 1
chr3:184164539|184164846 hsa-miR-148a-5p 0 0 1
chr3:184164539|184164846 hsa-miR-148a-3p 0 0 1
chr3:184164539|184164846 hsa-miR-30d-5p 0 0 1
chr3:184164539|184164846 hsa-miR-30d-3p 0 0 1
chr3:184164539|184164846 hsa-miR-205-5p 0 0 1
chr3:184164539|184164846 hsa-miR-205-3p 0 0 1
chr3:184164539|184164846 hsa-miR-30b-5p 0 0 1
chr3:184164539|184164846 hsa-miR-30b-3p 0 0 1
chr3:184164539|184164846 hsa-miR-152-5p 0 0 1
chr3:184164539|184164846 hsa-miR-152-3p 0 0 1
chr3:184164539|184164846 hsa-miR-30e-5p 0 0 1
chr3:184164539|184164846 hsa-miR-30e-3p 0 0 1
chr3:184164539|184164846 hsa-miR-148b-5p 0 0 1
chr3:184164539|184164846 hsa-miR-148b-3p 0 0 1
chr3:184164539|184164846 hsa-miR-346 0 0 1
chr3:184164539|184164846 hsa-miR-412-5p 0 0 1
chr3:184164539|184164846 hsa-miR-412-3p 0 0 1
chr3:184164539|184164846 hsa-miR-522-5p 0 0 1
chr3:184164539|184164846 hsa-miR-522-3p 0 0 1
chr3:184164539|184164846 hsa-miR-589-5p 0 0 1
chr3:184164539|184164846 hsa-miR-589-3p 0 0 1
chr3:184164539|184164846 hsa-miR-612 0 0 1
chr3:184164539|184164846 hsa-miR-625-5p 0 0 1
chr3:184164539|184164846 hsa-miR-625-3p 0 0 1
chr3:184164539|184164846 hsa-miR-632 0 0 1
chr3:184164539|184164846 hsa-miR-661 0 0 1
chr3:184164539|184164846 hsa-miR-892a 0 0 1
chr3:184164539|184164846 hsa-miR-874-5p 0 0 1
chr3:184164539|184164846 hsa-miR-874-3p 0 0 1
chr3:184164539|184164846 hsa-miR-1228-5p 0 0 1
chr3:184164539|184164846 hsa-miR-1228-3p 0 0 1
chr3:184164539|184164846 hsa-miR-1200 0 0 1
chr3:184164539|184164846 hsa-miR-1248 1 0 1
chr3:184164539|184164846 hsa-miR-1292-5p 0 0 1
chr3:184164539|184164846 hsa-miR-1292-3p 0 0 1
chr3:184164539|184164846 hsa-miR-1825 0 0 1
chr3:184164539|184164846 hsa-miR-941 0 0 1
chr3:184164539|184164846 hsa-miR-1184 0 0 1
chr3:184164539|184164846 hsa-miR-1224-3p 1 0 1
chr3:184164539|184164846 hsa-miR-532-5p 0 0 1
chr3:184164539|184164846 hsa-miR-331-3p 1 0 1
chr3:184164539|184164846 hsa-miR-324-3p 0 0 1
chr3:184164539|184164846 hsa-miR-342-3p 0 0 1
chr3:184164539|184164846 hsa-miR-516a-3p 0 0 1
chr3:184164539|184164846 hsa-miR-103 0 0 1
chr3:184164539|184164846 hsa-miR-30c 0 0 1
chr3:184164539|184164846 hsa-miR-9 0 0 1
chr3:184164539|184164846 hsa-miR-1285 0 0 1
chr3:184164539|184164846 hsa-miR-1254 0 0 1
chr3:184164539|184164846 hsa-miR-220a 0 0 1
chr3:184164539|184164846 hsa-miR-623 1 0 0
chr3:184164539|184164846 hsa-miR-1282 1 0 0
chr3:184164539|184164846 hsa-miR-1470 1 0 0
chr3:184164539|184164846 hsa-miR-1538 1 0 0
chr3:184164539|184164846 hsa-miR-718 1 0 0
chr3:184164539|184164846 hsa-miR-4308 1 0 0
chr3:184164539|184164846 hsa-miR-4327 1 0 0
chr3:184164539|184164846 hsa-miR-4292 1 0 0
chr3:184164539|184164846 hsa-miR-4290 1 0 0
chr3:184164539|184164846 hsa-miR-3938 1 0 0
chr3:184164539|184164846 hsa-miR-3943 1 0 0
chr3:184164539|184164846 hsa-miR-4449 1 0 0
chr3:184164539|184164846 hsa-miR-5193 1 0 0
chr3:184164539|184164846 hsa-miR-7704 1 0 0
chr3:184164539|184164846 hsa-miR-8073 1 0 0
chr3:184164539|184164846 hsa-miR-6749-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6747-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4726-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6836-3p 1 0 0
chr3:184164539|184164846 hsa-miR-212-5p 1 0 0
chr3:184164539|184164846 hsa-miR-149-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6892-3p 1 0 0
chr3:184164539|184164846 hsa-miR-210-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6881-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1225-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6873-3p 1 0 0
chr3:184164539|184164846 hsa-miR-7110-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6787-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1915-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6845-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6716-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6765-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6882-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6815-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4793-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6763-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6803-3p 1 0 0
chr3:184164539|184164846 hsa-miR-5001-3p 1 0 0
chr3:184164539|184164846 hsa-miR-7113-3p 1 0 0
chr3:184164539|184164846 hsa-miR-3679-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6878-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6818-3p 1 0 0
chr3:184164539|184164846 hsa-miR-7111-3p 1 0 0
chr3:184164539|184164846 hsa-miR-5196-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4667-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6742-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6769a-3p 1 0 0
chr3:184164539|184164846 hsa-miR-339-5p 1 0 0
chr3:184164539|184164846 hsa-miR-4646-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1237-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1236-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6743-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4687-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6813-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6804-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6867-3p 1 0 0
chr3:184164539|184164846 hsa-miR-629-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6887-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1180-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6895-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6865-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6826-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6886-3p 1 0 0
chr3:184164539|184164846 hsa-miR-5591-3p 1 0 0
chr3:184164539|184164846 hsa-miR-5088-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6773-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4749-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6795-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6777-3p 1 0 0
chr3:184164539|184164846 hsa-miR-502-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6760-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1285-5p 1 0 0
chr3:184164539|184164846 hsa-miR-3124-3p 1 0 0
chr3:184164539|184164846 hsa-miR-188-5p 1 0 0
chr3:184164539|184164846 hsa-miR-1255b-2-3p 1 0 0
chr3:184164539|184164846 hsa-miR-3620-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6734-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6812-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6780b-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6800-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6750-3p 1 0 0
chr3:184164539|184164846 hsa-miR-550b-3p 1 0 0
chr3:184164539|184164846 hsa-miR-1251-5p 1 0 0
chr3:184164539|184164846 hsa-miR-1343-5p 1 0 0
chr3:184164539|184164846 hsa-miR-320a-5p 1 0 0
chr3:184164539|184164846 hsa-miR-4685-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4755-5p 1 0 0
chr3:184164539|184164846 hsa-miR-5196-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6794-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6887-5p 1 0 0
chr3:184164539|184164846 hsa-miR-939-5p 1 0 0
chr3:184164539|184164846 hsa-miR-10396a-3p 1 0 0
chr3:184164539|184164846 hsa-miR-10396b-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6877-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6791-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6893-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6756-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6862-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6810-3p 1 0 0
chr3:184164539|184164846 hsa-miR-10392-3p 1 0 0
chr3:184164539|184164846 hsa-miR-3059-5p 1 0 0
chr3:184164539|184164846 hsa-miR-4723-3p 1 0 0
chr3:184164539|184164846 hsa-miR-504-5p 1 0 0
chr3:184164539|184164846 hsa-miR-6819-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6823-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6891-3p 1 0 0
chr3:184164539|184164846 hsa-miR-3085-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6744-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6781-3p 1 0 0
chr3:184164539|184164846 hsa-miR-4690-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6833-3p 1 0 0
chr3:184164539|184164846 hsa-miR-6766-3p 1 0 0
chr3:184164539|184164846 hsa-miR-664b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:184164539|184164846
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MVLAAVPPSQFHLAGLLQGMEAVGFTQCPVQG
Nucleotide Sequence CTGGTTCTCGCCGCCGTTCCCCCTTCGCAGTTCCATTTAGCCGGGTTGCTGCAGGGGATGGAAGCAGTTGGGTTTACACAGTGCCCAGTGCAGGGGTGA

CircID chr3:184164539|184164846
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGLHSAQCRGEGGREASQGLHWGQAYPELGK
Nucleotide Sequence TTGGGTTTACACAGTGCCCAGTGCAGGGGTGAAGGAGGGAGAGAGGCAAGCCAGGGGCTGCACTGGGGCCAGGCATATCCTGAGCTCGGGAAGTAG

CircID chr3:184164539|184164846
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MSSGSRARRWVAGWKVRGGCEVRTVSVFRKIYHALGHPSGVAALAGQTPKSPS
Nucleotide Sequence CTGAGCTCGGGAAGTAGGGCAAGAAGGTGGGTAGCTGGGTGGAAAGTGAGGGGAGGGTGTGAGGTGCGGACAGTGTCCGTGTTCAGGAAGATATACCATGCTCTGGGCCATCCCTCCGGCGTGGCCGCTCTCGCTGGGCAGACACCAAAGAGTCCGTCT

CircID chr3:184164539|184164846
ORF Type ORF4
Protein Length 96
Nucleotide Length 288
Protein Sequence MPSESGHAGGMAQSMVYLPEHGHCPHLTPSPHFPPSYPPSCPTSRAQDMPGPSAAPGLPLSLLHPCTGHCVNPTASIPCSNPAKWNCEGGTAARTR
Nucleotide Sequence CTGCCCAGCGAGAGCGGCCACGCCGGAGGGATGGCCCAGAGCATGGTATATCTTCCTGAACACGGACACTGTCCGCACCTCACACCCTCCCCTCACTTTCCACCCAGCTACCCACCTTCTTGCCCTACTTCCCGAGCTCAGGATATGCCTGGCCCCAGTGCAGCCCCTGGCTTGCCTCTCTCCCTCCTTCACCCCTGCACTGGGCACTGTGTAAACCCAACTGCTTCCATCCCCTGCAGCAACCCGGCTAAATGGAACTGCGAAGGGGGAACGGCGGCGAGAACCAGG

CircID chr3:184164539|184164846
ORF Type ORF5
Protein Length 52
Nucleotide Length 159
Protein Sequence MNTDTVRTSHPPLTFHPATHLLALLPELRICLAPVQPLACLSPSFTPALGTV
Nucleotide Sequence CTGAACACGGACACTGTCCGCACCTCACACCCTCCCCTCACTTTCCACCCAGCTACCCACCTTCTTGCCCTACTTCCCGAGCTCAGGATATGCCTGGCCCCAGTGCAGCCCCTGGCTTGCCTCTCTCCCTCCTTCACCCCTGCACTGGGCACTGTGTAA

CircID chr3:184164539|184164846
ORF Type ORF6
Protein Length 60
Nucleotide Length 183
Protein Sequence MSAPHTLPSLSTQLPTFLPYFPSSGYAWPQCSPWLASLPPSPLHWALCKPNCFHPLQQPG
Nucleotide Sequence CTGTCCGCACCTCACACCCTCCCCTCACTTTCCACCCAGCTACCCACCTTCTTGCCCTACTTCCCGAGCTCAGGATATGCCTGGCCCCAGTGCAGCCCCTGGCTTGCCTCTCTCCCTCCTTCACCCCTGCACTGGGCACTGTGTAAACCCAACTGCTTCCATCCCCTGCAGCAACCCGGCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites