CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184187907|184188195
Strand +
CircType exon
Host Gene ENSG00000161204.10;
Algorism CIRI2;
Sequence CAGCCCGTAACGGCGGCCCCATGCCAGGTTCACATCCGCTCCAGCCAGCAGTACTCTGCAGGAGTGGAGAAAGGAGACCAAAGATGCTCTAGAAATAGGTGCACAGCAAGTTTAATGACAAACCTAACATTGTTTATAGCCCCGTTTCACCTCTCCAAATTGTCCTCTAATTAGAAAAAGAAAGCCAACCCCTGCCACCACTATTCCCTCACCTATCGCCAAAAGACACATCAAAGTTCTCAATTCGCACATCATAGGATTTGTTCTTGCCAGATGATTCCAACCGACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184187907|184188195 hsa-miR-31-5p 0 0 1
chr3:184187907|184188195 hsa-miR-31-3p 0 0 1
chr3:184187907|184188195 hsa-miR-146a-5p 0 0 1
chr3:184187907|184188195 hsa-miR-146a-3p 0 0 1
chr3:184187907|184188195 hsa-miR-185-5p 0 0 1
chr3:184187907|184188195 hsa-miR-185-3p 0 0 1
chr3:184187907|184188195 hsa-miR-133b 0 0 1
chr3:184187907|184188195 hsa-miR-511-5p 0 0 1
chr3:184187907|184188195 hsa-miR-511-3p 0 0 1
chr3:184187907|184188195 hsa-miR-580-5p 0 0 1
chr3:184187907|184188195 hsa-miR-580-3p 0 0 1
chr3:184187907|184188195 hsa-miR-589-5p 0 0 1
chr3:184187907|184188195 hsa-miR-589-3p 0 0 1
chr3:184187907|184188195 hsa-miR-616-5p 0 0 1
chr3:184187907|184188195 hsa-miR-616-3p 0 0 1
chr3:184187907|184188195 hsa-miR-620 0 0 1
chr3:184187907|184188195 hsa-miR-877-5p 0 0 1
chr3:184187907|184188195 hsa-miR-877-3p 0 0 1
chr3:184187907|184188195 hsa-miR-1258 0 0 1
chr3:184187907|184188195 hsa-miR-1270 0 0 1
chr3:184187907|184188195 hsa-miR-1272 0 0 1
chr3:184187907|184188195 hsa-miR-1278 0 0 1
chr3:184187907|184188195 hsa-miR-1322 0 0 1
chr3:184187907|184188195 hsa-miR-140-5p 0 0 1
chr3:184187907|184188195 hsa-miR-490-3p 0 0 1
chr3:184187907|184188195 hsa-miR-576-5p 0 0 1
chr3:184187907|184188195 hsa-miR-1207-5p 1 0 1
chr3:184187907|184188195 hsa-miR-518d-5p 0 0 1
chr3:184187907|184188195 hsa-miR-519b-5p 0 0 1
chr3:184187907|184188195 hsa-miR-519c-5p 0 0 1
chr3:184187907|184188195 hsa-miR-520c-5p 0 0 1
chr3:184187907|184188195 hsa-miR-483-3p 0 0 1
chr3:184187907|184188195 hsa-miR-146b-5p 0 0 1
chr3:184187907|184188195 hsa-miR-515-5p 0 0 1
chr3:184187907|184188195 hsa-miR-9 0 0 1
chr3:184187907|184188195 hsa-miR-1300 0 0 1
chr3:184187907|184188195 hsa-miR-768-5p 0 0 1
chr3:184187907|184188195 hsa-miR-526a 0 0 1
chr3:184187907|184188195 hsa-miR-133a 0 0 1
chr3:184187907|184188195 hsa-miR-608 1 0 0
chr3:184187907|184188195 hsa-miR-650 1 0 0
chr3:184187907|184188195 hsa-miR-663a 1 0 0
chr3:184187907|184188195 hsa-miR-765 1 0 0
chr3:184187907|184188195 hsa-miR-1294 1 0 0
chr3:184187907|184188195 hsa-miR-3125 1 0 0
chr3:184187907|184188195 hsa-miR-4316 1 0 0
chr3:184187907|184188195 hsa-miR-4270 1 0 0
chr3:184187907|184188195 hsa-miR-4271 1 0 0
chr3:184187907|184188195 hsa-miR-3945 1 0 0
chr3:184187907|184188195 hsa-miR-4440 1 0 0
chr3:184187907|184188195 hsa-miR-4458 1 0 0
chr3:184187907|184188195 hsa-miR-4466 1 0 0
chr3:184187907|184188195 hsa-miR-4467 1 0 0
chr3:184187907|184188195 hsa-miR-4488 1 0 0
chr3:184187907|184188195 hsa-miR-4489 1 0 0
chr3:184187907|184188195 hsa-miR-4510 1 0 0
chr3:184187907|184188195 hsa-miR-4651 1 0 0
chr3:184187907|184188195 hsa-miR-4689 1 0 0
chr3:184187907|184188195 hsa-miR-4710 1 0 0
chr3:184187907|184188195 hsa-miR-4736 1 0 0
chr3:184187907|184188195 hsa-miR-4739 1 0 0
chr3:184187907|184188195 hsa-miR-5087 1 0 0
chr3:184187907|184188195 hsa-miR-5090 1 0 0
chr3:184187907|184188195 hsa-miR-5192 1 0 0
chr3:184187907|184188195 hsa-miR-5194 1 0 0
chr3:184187907|184188195 hsa-miR-5787 1 0 0
chr3:184187907|184188195 hsa-miR-6081 1 0 0
chr3:184187907|184188195 hsa-miR-6088 1 0 0
chr3:184187907|184188195 hsa-miR-6127 1 0 0
chr3:184187907|184188195 hsa-miR-6129 1 0 0
chr3:184187907|184188195 hsa-miR-6130 1 0 0
chr3:184187907|184188195 hsa-miR-6133 1 0 0
chr3:184187907|184188195 hsa-miR-7150 1 0 0
chr3:184187907|184188195 hsa-miR-8053 1 0 0
chr3:184187907|184188195 hsa-miR-8072 1 0 0
chr3:184187907|184188195 hsa-miR-8073 1 0 0
chr3:184187907|184188195 hsa-miR-10226 1 0 0
chr3:184187907|184188195 hsa-miR-12114 1 0 0
chr3:184187907|184188195 hsa-miR-12131 1 0 0
chr3:184187907|184188195 hsa-miR-4433b-3p 1 0 0
chr3:184187907|184188195 hsa-miR-92a-1-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6734-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6825-5p 1 0 0
chr3:184187907|184188195 hsa-miR-125a-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6799-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6510-5p 1 0 0
chr3:184187907|184188195 hsa-miR-766-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6873-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6880-5p 1 0 0
chr3:184187907|184188195 hsa-miR-7847-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6730-5p 1 0 0
chr3:184187907|184188195 hsa-miR-7154-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6721-5p 1 0 0
chr3:184187907|184188195 hsa-miR-8069 1 0 0
chr3:184187907|184188195 hsa-miR-6716-5p 1 0 0
chr3:184187907|184188195 hsa-miR-3151-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1292-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6798-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1224-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6760-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6782-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6765-3p 1 0 0
chr3:184187907|184188195 hsa-miR-4711-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6786-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6835-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1226-5p 1 0 0
chr3:184187907|184188195 hsa-miR-193b-5p 1 0 0
chr3:184187907|184188195 hsa-miR-885-3p 1 0 0
chr3:184187907|184188195 hsa-miR-1908-5p 1 0 0
chr3:184187907|184188195 hsa-let-7b-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6847-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6834-5p 1 0 0
chr3:184187907|184188195 hsa-miR-4787-5p 1 0 0
chr3:184187907|184188195 hsa-miR-149-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6717-5p 1 0 0
chr3:184187907|184188195 hsa-miR-3616-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6824-5p 1 0 0
chr3:184187907|184188195 hsa-miR-3162-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6800-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6802-5p 1 0 0
chr3:184187907|184188195 hsa-miR-664b-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6869-5p 1 0 0
chr3:184187907|184188195 hsa-let-7e-5p 1 0 0
chr3:184187907|184188195 hsa-miR-744-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6818-5p 1 0 0
chr3:184187907|184188195 hsa-miR-10400-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1233-5p 1 0 0
chr3:184187907|184188195 hsa-miR-4763-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6787-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6812-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6816-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6865-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6775-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6756-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6803-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6851-5p 1 0 0
chr3:184187907|184188195 hsa-miR-10401-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6722-3p 1 0 0
chr3:184187907|184188195 hsa-miR-6751-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6763-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6779-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6780a-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6788-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6797-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6808-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6875-5p 1 0 0
chr3:184187907|184188195 hsa-miR-7111-5p 1 0 0
chr3:184187907|184188195 hsa-miR-4728-5p 1 0 0
chr3:184187907|184188195 hsa-miR-5196-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6836-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1237-5p 1 0 0
chr3:184187907|184188195 hsa-miR-1909-3p 1 0 0
chr3:184187907|184188195 hsa-miR-4649-5p 1 0 0
chr3:184187907|184188195 hsa-miR-4701-3p 1 0 0
chr3:184187907|184188195 hsa-miR-4745-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6729-5p 1 0 0
chr3:184187907|184188195 hsa-miR-939-5p 1 0 0
chr3:184187907|184188195 hsa-miR-3198 1 0 0
chr3:184187907|184188195 hsa-miR-6736-5p 1 0 0
chr3:184187907|184188195 hsa-miR-3679-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6750-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6849-5p 1 0 0
chr3:184187907|184188195 hsa-miR-6822-5p 1 0 0
chr3:184187907|184188195 hsa-miR-9851-5p 1 0 0
chr3:184187907|184188195 hsa-miR-450b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:184187907|184188195
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MARTNPMMCELRTLMCLLAIGEGIVVAGVGFLFLIRGQFGEVKRGYKQC
Nucleotide Sequence CTGGCAAGAACAAATCCTATGATGTGCGAATTGAGAACTTTGATGTGTCTTTTGGCGATAGGTGAGGGAATAGTGGTGGCAGGGGTTGGCTTTCTTTTTCTAATTAGAGGACAATTTGGAGAGGTGAAACGGGGCTATAAACAATGTTAG
CircID chr3:184187907|184188195
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MVSFLHSCRVLLAGADVNLAWGRRYGL
Nucleotide Sequence TTGGTCTCCTTTCTCCACTCCTGCAGAGTACTGCTGGCTGGAGCGGATGTGAACCTGGCATGGGGCCGCCGTTACGGGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab