CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184321585|184321782
Strand -
CircType exon
Host Gene ENSG00000114867.18;
Algorism CIRI2;
Sequence CGGTTCCAGAATCTGAGTTTTCTTCCAGTCCTCTCCAGGCTCCCACCCCTTTGGCATCTCACACAGTGGAAATTCATGAGCCTAATGGCATGGTCCCATCTGAAGATCTGGAACCAGAGGTGGAGTCAAGCCCAGAGCTTGCTCCTCCCCCAGCTTGCCCCTCCGAATCCCCTGTGCCCATTGCTCCAACTGCCCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184321585|184321782 hsa-miR-143-5p 0 0 1
chr3:184321585|184321782 hsa-miR-143-3p 0 0 1
chr3:184321585|184321782 hsa-miR-185-5p 0 0 1
chr3:184321585|184321782 hsa-miR-185-3p 0 0 1
chr3:184321585|184321782 hsa-miR-326 0 1 1
chr3:184321585|184321782 hsa-miR-591 0 0 1
chr3:184321585|184321782 hsa-miR-608 1 1 1
chr3:184321585|184321782 hsa-miR-612 1 0 1
chr3:184321585|184321782 hsa-miR-625-5p 0 0 1
chr3:184321585|184321782 hsa-miR-625-3p 0 0 1
chr3:184321585|184321782 hsa-miR-637 1 1 1
chr3:184321585|184321782 hsa-miR-765 0 0 1
chr3:184321585|184321782 hsa-miR-892a 0 0 1
chr3:184321585|184321782 hsa-miR-920 0 0 1
chr3:184321585|184321782 hsa-miR-1299 0 0 1
chr3:184321585|184321782 hsa-miR-1275 0 1 1
chr3:184321585|184321782 hsa-miR-423-5p 1 1 1
chr3:184321585|184321782 hsa-miR-525-5p 0 0 1
chr3:184321585|184321782 hsa-miR-875-3p 0 0 1
chr3:184321585|184321782 hsa-miR-520a-5p 0 0 1
chr3:184321585|184321782 hsa-miR-330-5p 0 1 1
chr3:184321585|184321782 hsa-miR-220c 0 0 1
chr3:184321585|184321782 hsa-miR-7 0 0 1
chr3:184321585|184321782 hsa-miR-1285 0 0 1
chr3:184321585|184321782 hsa-miR-516b 0 0 1
chr3:184321585|184321782 hsa-miR-1254 0 0 1
chr3:184321585|184321782 hsa-miR-449a 1 0 0
chr3:184321585|184321782 hsa-miR-555 1 0 0
chr3:184321585|184321782 hsa-miR-564 1 0 0
chr3:184321585|184321782 hsa-miR-658 1 0 0
chr3:184321585|184321782 hsa-miR-762 1 0 0
chr3:184321585|184321782 hsa-miR-933 1 0 0
chr3:184321585|184321782 hsa-miR-1293 1 0 0
chr3:184321585|184321782 hsa-miR-2861 1 0 0
chr3:184321585|184321782 hsa-miR-3131 1 1 0
chr3:184321585|184321782 hsa-miR-3132 1 0 0
chr3:184321585|184321782 hsa-miR-3147 1 1 0
chr3:184321585|184321782 hsa-miR-3154 1 0 0
chr3:184321585|184321782 hsa-miR-320e 0 1 0
chr3:184321585|184321782 hsa-miR-4259 1 0 0
chr3:184321585|184321782 hsa-miR-4270 1 0 0
chr3:184321585|184321782 hsa-miR-3945 1 0 0
chr3:184321585|184321782 hsa-miR-378g 0 1 0
chr3:184321585|184321782 hsa-miR-4430 1 0 0
chr3:184321585|184321782 hsa-miR-4437 1 0 0
chr3:184321585|184321782 hsa-miR-4450 1 1 0
chr3:184321585|184321782 hsa-miR-3135b 1 0 0
chr3:184321585|184321782 hsa-miR-4466 1 0 0
chr3:184321585|184321782 hsa-miR-4519 1 0 0
chr3:184321585|184321782 hsa-miR-4525 1 0 0
chr3:184321585|184321782 hsa-miR-4538 1 0 0
chr3:184321585|184321782 hsa-miR-4651 1 0 0
chr3:184321585|184321782 hsa-miR-4654 1 0 0
chr3:184321585|184321782 hsa-miR-4688 1 1 0
chr3:184321585|184321782 hsa-miR-4739 1 0 0
chr3:184321585|184321782 hsa-miR-5194 1 0 0
chr3:184321585|184321782 hsa-miR-6081 1 0 0
chr3:184321585|184321782 hsa-miR-6085 1 0 0
chr3:184321585|184321782 hsa-miR-6086 1 0 0
chr3:184321585|184321782 hsa-miR-6088 1 0 0
chr3:184321585|184321782 hsa-miR-6090 1 0 0
chr3:184321585|184321782 hsa-miR-6860 1 0 0
chr3:184321585|184321782 hsa-miR-8089 1 0 0
chr3:184321585|184321782 hsa-miR-12119 1 0 0
chr3:184321585|184321782 hsa-miR-150-3p 1 0 0
chr3:184321585|184321782 hsa-miR-4433b-3p 1 0 0
chr3:184321585|184321782 hsa-miR-6861-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7106-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6825-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6894-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6857-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4687-3p 1 0 0
chr3:184321585|184321782 hsa-miR-6854-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6510-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6728-5p 1 0 0
chr3:184321585|184321782 hsa-miR-766-5p 1 0 0
chr3:184321585|184321782 hsa-miR-3622a-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6515-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6757-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7847-3p 1 0 0
chr3:184321585|184321782 hsa-miR-769-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6727-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6721-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4655-5p 1 0 0
chr3:184321585|184321782 hsa-miR-197-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6742-5p 1 0 0
chr3:184321585|184321782 hsa-miR-3151-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1292-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6748-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6793-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6732-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6827-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6798-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6782-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6810-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6786-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7109-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1229-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4640-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7161-3p 0 1 0
chr3:184321585|184321782 hsa-miR-1228-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6771-5p 1 0 0
chr3:184321585|184321782 hsa-miR-92b-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6749-5p 1 0 0
chr3:184321585|184321782 hsa-miR-149-3p 1 0 0
chr3:184321585|184321782 hsa-miR-6824-5p 1 0 0
chr3:184321585|184321782 hsa-miR-3925-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6878-5p 0 1 0
chr3:184321585|184321782 hsa-miR-5010-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6869-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1225-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6499-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6818-5p 0 1 0
chr3:184321585|184321782 hsa-miR-4750-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6509-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6847-3p 0 1 0
chr3:184321585|184321782 hsa-miR-1233-5p 1 1 0
chr3:184321585|184321782 hsa-miR-4763-3p 1 0 0
chr3:184321585|184321782 hsa-miR-6769b-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6778-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6787-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6812-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6865-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6775-5p 1 1 0
chr3:184321585|184321782 hsa-miR-5001-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6726-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6737-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6743-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6752-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6756-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6769a-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6803-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6813-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6819-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7107-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7110-5p 1 0 0
chr3:184321585|184321782 hsa-miR-10401-5p 1 0 0
chr3:184321585|184321782 hsa-miR-11181-3p 0 1 0
chr3:184321585|184321782 hsa-miR-1249-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6722-3p 1 1 0
chr3:184321585|184321782 hsa-miR-6751-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6763-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6779-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6780a-5p 1 0 0
chr3:184321585|184321782 hsa-miR-7111-5p 1 1 0
chr3:184321585|184321782 hsa-miR-3620-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4728-5p 1 0 0
chr3:184321585|184321782 hsa-miR-5189-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6862-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1237-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1909-3p 1 0 0
chr3:184321585|184321782 hsa-miR-328-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4649-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6738-5p 1 0 0
chr3:184321585|184321782 hsa-miR-675-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6795-5p 0 1 0
chr3:184321585|184321782 hsa-miR-6846-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6848-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6887-5p 1 0 0
chr3:184321585|184321782 hsa-miR-3187-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6885-5p 1 0 0
chr3:184321585|184321782 hsa-miR-939-5p 1 1 0
chr3:184321585|184321782 hsa-miR-4758-5p 1 0 0
chr3:184321585|184321782 hsa-miR-4769-5p 1 0 0
chr3:184321585|184321782 hsa-miR-3085-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6773-5p 1 0 0
chr3:184321585|184321782 hsa-miR-1914-3p 1 0 0
chr3:184321585|184321782 hsa-miR-4665-5p 0 1 0
chr3:184321585|184321782 hsa-miR-324-3p 1 0 0
chr3:184321585|184321782 hsa-miR-541-3p 1 0 0
chr3:184321585|184321782 hsa-miR-6766-5p 1 1 0
chr3:184321585|184321782 hsa-miR-6791-5p 1 0 0
chr3:184321585|184321782 hsa-miR-6762-5p 1 0 0
chr3:184321585|184321782 hsa-miR-449b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:184321585|184321782
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MSFLPVLSRLPPLWHLTQWKFMSLMAWSHLKIWNQRWSQAQSLLLPQLAPPNPLCPLLQLPN
Nucleotide Sequence CTGAGTTTTCTTCCAGTCCTCTCCAGGCTCCCACCCCTTTGGCATCTCACACAGTGGAAATTCATGAGCCTAATGGCATGGTCCCATCTGAAGATCTGGAACCAGAGGTGGAGTCAAGCCCAGAGCTTGCTCCTCCCCCAGCTTGCCCCTCCGAATCCCCTGTGCCCATTGCTCCAACTGCCCAAC
CircID chr3:184321585|184321782
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MASHTVEIHEPNGMVPSEDLEPEVESSPELAPPPACPSESPVPIAPTAQ
Nucleotide Sequence TTGGCATCTCACACAGTGGAAATTCATGAGCCTAATGGCATGGTCCCATCTGAAGATCTGGAACCAGAGGTGGAGTCAAGCCCAGAGCTTGCTCCTCCCCCAGCTTGCCCCTCCGAATCCCCTGTGCCCATTGCTCCAACTGCCCAA
CircID chr3:184321585|184321782
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MEQWAQGIRRGKLGEEQALGLTPPLVPDLQMGPCH
Nucleotide Sequence TTGGAGCAATGGGCACAGGGGATTCGGAGGGGCAAGCTGGGGGAGGAGCAAGCTCTGGGCTTGACTCCACCTCTGGTTCCAGATCTTCAGATGGGACCATGCCATTAG
CircID chr3:184321585|184321782
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MNFHCVRCQRGGSLERTGRKLRFWN
Nucleotide Sequence ATGAATTTCCACTGTGTGAGATGCCAAAGGGGTGGGAGCCTGGAGAGGACTGGAAGAAAACTCAGATTCTGGAAC
CircID chr3:184321585|184321782
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MGTGDSEGQAGGGASSGLDSTSGSRSSDGTMPLGS
Nucleotide Sequence ATGGGCACAGGGGATTCGGAGGGGCAAGCTGGGGGAGGAGCAAGCTCTGGGCTTGACTCCACCTCTGGTTCCAGATCTTCAGATGGGACCATGCCATTAGGCTCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab