CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184322384|184322605
Strand +
CircType exon
Host Gene ENSG00000114867.18;
Algorism CIRI2;
Sequence TCTGGGCCTGGATTGCTGCCTGCAGGAGGCTGATTTTCCACCTCTGGTACTGCCGGGTTCGCCTAGAACAACAGAACATCCAGTTTTGGTTGCAGAATGACCACTGCTCCATACCTCAACTTGGCCCTCTCCCCTCCCATTTTCTGCTCCCTTACCTCCTTGAAGGCATCCAGAAGGTCTCCAACAGCCTCCTTCTTATTTAGCTCCTTAATTTTCCGTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184322384|184322605 hsa-let-7b-5p 0 0 1
chr3:184322384|184322605 hsa-let-7b-3p 0 0 1
chr3:184322384|184322605 hsa-let-7c-5p 0 0 1
chr3:184322384|184322605 hsa-let-7c-3p 0 0 1
chr3:184322384|184322605 hsa-let-7d-5p 0 0 1
chr3:184322384|184322605 hsa-let-7d-3p 0 0 1
chr3:184322384|184322605 hsa-let-7e-5p 0 0 1
chr3:184322384|184322605 hsa-let-7e-3p 0 0 1
chr3:184322384|184322605 hsa-miR-98-5p 0 0 1
chr3:184322384|184322605 hsa-miR-98-3p 0 0 1
chr3:184322384|184322605 hsa-let-7g-5p 0 0 1
chr3:184322384|184322605 hsa-let-7g-3p 0 0 1
chr3:184322384|184322605 hsa-let-7i-5p 0 0 1
chr3:184322384|184322605 hsa-let-7i-3p 0 0 1
chr3:184322384|184322605 hsa-miR-202-5p 0 0 1
chr3:184322384|184322605 hsa-miR-202-3p 0 0 1
chr3:184322384|184322605 hsa-miR-610 0 0 1
chr3:184322384|184322605 hsa-miR-620 0 0 1
chr3:184322384|184322605 hsa-miR-645 0 0 1
chr3:184322384|184322605 hsa-miR-1323 0 0 1
chr3:184322384|184322605 hsa-miR-708-5p 0 0 1
chr3:184322384|184322605 hsa-miR-708-3p 0 0 1
chr3:184322384|184322605 hsa-miR-1237-5p 0 0 1
chr3:184322384|184322605 hsa-miR-1237-3p 0 0 1
chr3:184322384|184322605 hsa-miR-1205 0 0 1
chr3:184322384|184322605 hsa-miR-548e-5p 0 0 1
chr3:184322384|184322605 hsa-miR-548e-3p 0 0 1
chr3:184322384|184322605 hsa-miR-1299 0 0 1
chr3:184322384|184322605 hsa-miR-1243 0 0 1
chr3:184322384|184322605 hsa-miR-548o-3p 0 0 1
chr3:184322384|184322605 hsa-miR-1267 0 0 1
chr3:184322384|184322605 hsa-miR-1270 0 0 1
chr3:184322384|184322605 hsa-miR-548o 0 0 1
chr3:184322384|184322605 hsa-miR-769-5p 0 1 1
chr3:184322384|184322605 hsa-miR-485-5p 0 0 1
chr3:184322384|184322605 hsa-miR-941 0 1 1
chr3:184322384|184322605 hsa-miR-532-5p 0 0 1
chr3:184322384|184322605 hsa-miR-28-5p 0 0 1
chr3:184322384|184322605 hsa-miR-548a-3p 0 0 1
chr3:184322384|184322605 hsa-miR-548f 0 0 1
chr3:184322384|184322605 hsa-let-7a 0 0 1
chr3:184322384|184322605 hsa-let-7f 0 0 1
chr3:184322384|184322605 hsa-miR-516b 0 0 1
chr3:184322384|184322605 hsa-miR-544 0 0 1
chr3:184322384|184322605 hsa-miR-184 1 0 0
chr3:184322384|184322605 hsa-miR-298 1 0 0
chr3:184322384|184322605 hsa-miR-920 1 0 0
chr3:184322384|184322605 hsa-miR-1275 1 0 0
chr3:184322384|184322605 hsa-miR-2861 1 0 0
chr3:184322384|184322605 hsa-miR-3154 1 0 0
chr3:184322384|184322605 hsa-miR-3175 1 1 0
chr3:184322384|184322605 hsa-miR-4257 0 1 0
chr3:184322384|184322605 hsa-miR-4270 1 0 0
chr3:184322384|184322605 hsa-miR-4271 1 0 0
chr3:184322384|184322605 hsa-miR-4458 1 0 0
chr3:184322384|184322605 hsa-miR-4468 1 0 0
chr3:184322384|184322605 hsa-miR-3689c 1 0 0
chr3:184322384|184322605 hsa-miR-4481 1 0 0
chr3:184322384|184322605 hsa-miR-4488 1 0 0
chr3:184322384|184322605 hsa-miR-4510 1 0 0
chr3:184322384|184322605 hsa-miR-4514 0 1 0
chr3:184322384|184322605 hsa-miR-4533 1 1 0
chr3:184322384|184322605 hsa-miR-4651 1 0 0
chr3:184322384|184322605 hsa-miR-4688 1 0 0
chr3:184322384|184322605 hsa-miR-4689 1 0 0
chr3:184322384|184322605 hsa-miR-4706 1 0 0
chr3:184322384|184322605 hsa-miR-4710 1 0 0
chr3:184322384|184322605 hsa-miR-4721 1 0 0
chr3:184322384|184322605 hsa-miR-4734 1 1 0
chr3:184322384|184322605 hsa-miR-4739 1 0 0
chr3:184322384|184322605 hsa-miR-5090 1 0 0
chr3:184322384|184322605 hsa-miR-5572 1 0 0
chr3:184322384|184322605 hsa-miR-5698 1 0 0
chr3:184322384|184322605 hsa-miR-6081 1 1 0
chr3:184322384|184322605 hsa-miR-6085 1 0 0
chr3:184322384|184322605 hsa-miR-6086 1 0 0
chr3:184322384|184322605 hsa-miR-6088 1 0 0
chr3:184322384|184322605 hsa-miR-6090 1 0 0
chr3:184322384|184322605 hsa-miR-6124 1 0 0
chr3:184322384|184322605 hsa-miR-6127 1 0 0
chr3:184322384|184322605 hsa-miR-6129 1 0 0
chr3:184322384|184322605 hsa-miR-6130 1 0 0
chr3:184322384|184322605 hsa-miR-6133 1 1 0
chr3:184322384|184322605 hsa-miR-6134 1 0 0
chr3:184322384|184322605 hsa-miR-6165 1 0 0
chr3:184322384|184322605 hsa-miR-7150 1 0 0
chr3:184322384|184322605 hsa-miR-8085 1 0 0
chr3:184322384|184322605 hsa-miR-12115 1 0 0
chr3:184322384|184322605 hsa-miR-12118 1 1 0
chr3:184322384|184322605 hsa-miR-12128 1 0 0
chr3:184322384|184322605 hsa-miR-6734-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3150a-3p 1 0 0
chr3:184322384|184322605 hsa-miR-7106-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6825-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6894-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4687-3p 1 1 0
chr3:184322384|184322605 hsa-miR-125a-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6799-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6728-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1227-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3192-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6873-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6880-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4695-5p 1 1 0
chr3:184322384|184322605 hsa-miR-4653-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6890-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6741-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6806-5p 1 1 0
chr3:184322384|184322605 hsa-miR-6721-5p 1 0 0
chr3:184322384|184322605 hsa-miR-197-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6871-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3180-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6772-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6732-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3190-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6805-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6827-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6881-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6835-5p 1 0 0
chr3:184322384|184322605 hsa-miR-5088-5p 1 0 0
chr3:184322384|184322605 hsa-miR-7109-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4640-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1908-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1228-5p 1 0 0
chr3:184322384|184322605 hsa-miR-92b-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3202 1 0 0
chr3:184322384|184322605 hsa-miR-7854-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6834-5p 1 0 0
chr3:184322384|184322605 hsa-miR-149-3p 1 1 0
chr3:184322384|184322605 hsa-miR-3616-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6824-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3162-5p 1 1 0
chr3:184322384|184322605 hsa-miR-6877-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6892-5p 1 1 0
chr3:184322384|184322605 hsa-miR-5010-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6895-5p 0 1 0
chr3:184322384|184322605 hsa-miR-664b-5p 1 1 0
chr3:184322384|184322605 hsa-miR-423-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6826-5p 1 0 0
chr3:184322384|184322605 hsa-miR-660-3p 0 1 0
chr3:184322384|184322605 hsa-miR-6792-5p 1 0 0
chr3:184322384|184322605 hsa-miR-483-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1233-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1273h-5p 1 0 0
chr3:184322384|184322605 hsa-miR-3689b-3p 1 0 0
chr3:184322384|184322605 hsa-miR-4763-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6778-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6787-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6816-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6865-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6870-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1343-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6726-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6737-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6743-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6752-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6754-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6756-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6803-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6819-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6842-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6851-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1249-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6779-5p 1 1 0
chr3:184322384|184322605 hsa-miR-6780a-5p 1 1 0
chr3:184322384|184322605 hsa-miR-6788-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6797-5p 1 1 0
chr3:184322384|184322605 hsa-miR-7111-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4728-5p 1 1 0
chr3:184322384|184322605 hsa-miR-5196-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6780b-5p 1 0 0
chr3:184322384|184322605 hsa-miR-10526-3p 1 0 0
chr3:184322384|184322605 hsa-miR-328-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4632-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4649-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4725-3p 1 0 0
chr3:184322384|184322605 hsa-miR-4726-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6729-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6735-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6738-5p 1 0 0
chr3:184322384|184322605 hsa-miR-675-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6795-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6846-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6848-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6858-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6883-5p 1 1 0
chr3:184322384|184322605 hsa-miR-6887-5p 1 0 0
chr3:184322384|184322605 hsa-miR-4723-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6831-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6845-5p 1 0 0
chr3:184322384|184322605 hsa-miR-939-5p 1 1 0
chr3:184322384|184322605 hsa-miR-4769-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6511a-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6511b-5p 0 1 0
chr3:184322384|184322605 hsa-miR-3085-5p 1 0 0
chr3:184322384|184322605 hsa-miR-30c-1-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6731-5p 1 0 0
chr3:184322384|184322605 hsa-miR-1914-3p 1 0 0
chr3:184322384|184322605 hsa-miR-3173-3p 1 1 0
chr3:184322384|184322605 hsa-miR-6891-5p 1 1 0
chr3:184322384|184322605 hsa-miR-4716-3p 1 0 0
chr3:184322384|184322605 hsa-miR-6750-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6785-5p 1 0 0
chr3:184322384|184322605 hsa-miR-5591-5p 1 0 0
chr3:184322384|184322605 hsa-miR-6762-5p 1 0 0
chr3:184322384|184322605 hsa-miR-5581-5p 1 0 0
chr3:184322384|184322605 hsa-miR-10394-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:184322384|184322605
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MTTAPYLNLALSPPIFCSLTSLKASRRSPTASFLFSSLIFRL
Nucleotide Sequence ATGACCACTGCTCCATACCTCAACTTGGCCCTCTCCCCTCCCATTTTCTGCTCCCTTACCTCCTTGAAGGCATCCAGAAGGTCTCCAACAGCCTCCTTCTTATTTAGCTCCTTAATTTTCCGTCTC
CircID chr3:184322384|184322605
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence LGLDCCLQEADFPPLVLPGSPRTTEHPVLVAE
Nucleotide Sequence CTGGGCCTGGATTGCTGCCTGCAGGAGGCTGATTTTCCACCTCTGGTACTGCCGGGTTCGCCTAGAACAACAGAACATCCAGTTTTGGTTGCAGAATGA
CircID chr3:184322384|184322605
ORF Type ORF3
Protein Length 57
Nucleotide Length 174
Protein Sequence MIFHLWYCRVRLEQQNIQFWLQNDHCSIPQLGPLPSHFLLPYLLEGIQKVSNSLLLI
Nucleotide Sequence CTGATTTTCCACCTCTGGTACTGCCGGGTTCGCCTAGAACAACAGAACATCCAGTTTTGGTTGCAGAATGACCACTGCTCCATACCTCAACTTGGCCCTCTCCCCTCCCATTTTCTGCTCCCTTACCTCCTTGAAGGCATCCAGAAGGTCTCCAACAGCCTCCTTCTTATTTAG
CircID chr3:184322384|184322605
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MDAFKEVREQKMGGERAKLRYGAVVILQPKLDVLLF
Nucleotide Sequence CTGGATGCCTTCAAGGAGGTAAGGGAGCAGAAAATGGGAGGGGAGAGGGCCAAGTTGAGGTATGGAGCAGTGGTCATTCTGCAACCAAAACTGGATGTTCTGTTGTTCTAG
CircID chr3:184322384|184322605
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MEQWSFCNQNWMFCCSRRTRQYQRWKISLLQAAIQAQ
Nucleotide Sequence ATGGAGCAGTGGTCATTCTGCAACCAAAACTGGATGTTCTGTTGTTCTAGGCGAACCCGGCAGTACCAGAGGTGGAAAATCAGCCTCCTGCAGGCAGCAATCCAGGCCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab