CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184326947|184327325
Strand -
CircType exon
Host Gene ENSG00000114867.18;
Algorism CIRI2;
Sequence CCACAGAAAGCACAGATAATAGACGTGTGGTGCAGAGGTGAGGTTTCCTGGACATCTTTGTTATTCACACTGGGGGTACCGTGATTGGGTTCTGGTTGTTGCCATAGGTTGGAAATTTCTTCATACCTGTCCTGGTTGGAGCCCTTGGGTTAGATTGGGGCATACTCATTATGCTAAGAACAAGGCCCAACAGTTGCTCAGCATGTTGTGTAATTACATGAGTGCCTGGGCAGTGCAAGTGAGTGAAAATTTGTCTGTCTGTCTTCCAGGAGTAGCTTGAGCCGAGAACGAGGCGAGAAAGCTGGAGACCGAGGAGACCGCCTAGAGCGGAGTGAACGGGGAGGGGACCGTGGGGACCGGCTTGATCGTGCGCGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184326947|184327325 hsa-miR-198 0 0 1
chr3:184326947|184327325 hsa-miR-183-5p 0 0 1
chr3:184326947|184327325 hsa-miR-183-3p 0 0 1
chr3:184326947|184327325 hsa-miR-380-5p 0 0 1
chr3:184326947|184327325 hsa-miR-380-3p 0 0 1
chr3:184326947|184327325 hsa-miR-495-5p 0 0 1
chr3:184326947|184327325 hsa-miR-495-3p 0 0 1
chr3:184326947|184327325 hsa-miR-496 0 0 1
chr3:184326947|184327325 hsa-miR-572 1 1 1
chr3:184326947|184327325 hsa-miR-636 0 0 1
chr3:184326947|184327325 hsa-miR-645 0 0 1
chr3:184326947|184327325 hsa-miR-766-5p 0 0 1
chr3:184326947|184327325 hsa-miR-766-3p 0 0 1
chr3:184326947|184327325 hsa-miR-665 0 0 1
chr3:184326947|184327325 hsa-miR-937-5p 0 0 1
chr3:184326947|184327325 hsa-miR-937-3p 0 0 1
chr3:184326947|184327325 hsa-miR-1257 0 0 1
chr3:184326947|184327325 hsa-miR-1281 0 0 1
chr3:184326947|184327325 hsa-miR-1307-5p 0 0 1
chr3:184326947|184327325 hsa-miR-1307-3p 0 0 1
chr3:184326947|184327325 hsa-miR-1324 0 1 1
chr3:184326947|184327325 hsa-miR-767-5p 0 0 1
chr3:184326947|184327325 hsa-miR-199a-5p 0 0 1
chr3:184326947|184327325 hsa-miR-361-3p 0 1 1
chr3:184326947|184327325 hsa-miR-199b-5p 0 0 1
chr3:184326947|184327325 hsa-miR-483-3p 0 0 1
chr3:184326947|184327325 hsa-miR-513a-3p 0 0 1
chr3:184326947|184327325 hsa-miR-7 0 0 1
chr3:184326947|184327325 hsa-miR-218 0 0 1
chr3:184326947|184327325 hsa-miR-4312 0 1 0
chr3:184326947|184327325 hsa-miR-4436a 0 1 0
chr3:184326947|184327325 hsa-miR-4752 0 1 0
chr3:184326947|184327325 hsa-miR-5100 1 0 0
chr3:184326947|184327325 hsa-miR-6822-3p 0 1 0
chr3:184326947|184327325 hsa-miR-6720-5p 0 1 0
chr3:184326947|184327325 hsa-miR-187-5p 1 0 0
chr3:184326947|184327325 hsa-miR-182-5p 0 1 0
chr3:184326947|184327325 hsa-miR-6849-3p 1 0 0
chr3:184326947|184327325 hsa-miR-3190-3p 0 1 0
chr3:184326947|184327325 hsa-miR-5088-5p 0 1 0
chr3:184326947|184327325 hsa-miR-1247-5p 1 0 0
chr3:184326947|184327325 hsa-miR-2114-5p 1 0 0
chr3:184326947|184327325 hsa-miR-6887-3p 1 1 0
chr3:184326947|184327325 hsa-miR-7848-3p 0 1 0
chr3:184326947|184327325 hsa-miR-671-3p 0 1 0
chr3:184326947|184327325 hsa-miR-3160-5p 0 1 0
chr3:184326947|184327325 hsa-miR-6826-3p 1 1 0
chr3:184326947|184327325 hsa-miR-5004-5p 0 1 0
chr3:184326947|184327325 hsa-miR-1229-3p 0 1 0
chr3:184326947|184327325 hsa-miR-6734-3p 1 1 0
chr3:184326947|184327325 hsa-miR-219b-5p 0 1 0
chr3:184326947|184327325 hsa-miR-3157-3p 0 1 0
chr3:184326947|184327325 hsa-miR-6761-3p 1 0 0
chr3:184326947|184327325 hsa-miR-4714-3p 0 1 0
chr3:184326947|184327325 hsa-miR-6890-3p 0 1 0
chr3:184326947|184327325 hsa-miR-3162-3p 1 0 0
chr3:184326947|184327325 hsa-miR-2116-5p 0 1 0
chr3:184326947|184327325 hsa-miR-6791-3p 0 1 0
chr3:184326947|184327325 hsa-miR-10401-3p 1 0 0
chr3:184326947|184327325 hsa-miR-6775-3p 1 0 0
chr3:184326947|184327325 hsa-miR-1301-5p 0 1 0
chr3:184326947|184327325 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr3:184326947|184327325
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MSSRSSLSRERGEKAGDRGDRLERSERGGDRGDRLDRART
Nucleotide Sequence CTGTCTTCCAGGAGTAGCTTGAGCCGAGAACGAGGCGAGAAAGCTGGAGACCGAGGAGACCGCCTAGAGCGGAGTGAACGGGGAGGGGACCGTGGGGACCGGCTTGATCGTGCGCGGACA

CircID chr3:184326947|184327325
ORF Type ORF2
Protein Length 62
Nucleotide Length 189
Protein Sequence MVVAIGWKFLHTCPGWSPWVRLGHTHYAKNKAQQLLSMLCNYMSAWAVQVSENLSVCLPGVA
Nucleotide Sequence CTGGTTGTTGCCATAGGTTGGAAATTTCTTCATACCTGTCCTGGTTGGAGCCCTTGGGTTAGATTGGGGCATACTCATTATGCTAAGAACAAGGCCCAACAGTTGCTCAGCATGTTGTGTAATTACATGAGTGCCTGGGCAGTGCAAGTGAGTGAAAATTTGTCTGTCTGTCTTCCAGGAGTAGCTTGA

CircID chr3:184326947|184327325
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MVGALGLDWGILIMLRTRPNSCSACCVIT
Nucleotide Sequence CTGGTTGGAGCCCTTGGGTTAGATTGGGGCATACTCATTATGCTAAGAACAAGGCCCAACAGTTGCTCAGCATGTTGTGTAATTACATGA

CircID chr3:184326947|184327325
ORF Type ORF4
Protein Length 57
Nucleotide Length 174
Protein Sequence MHCPGTHVITQHAEQLLGLVLSIMSMPQSNPRAPTRTGMKKFPTYGNNQNPITVPPV
Nucleotide Sequence TTGCACTGCCCAGGCACTCATGTAATTACACAACATGCTGAGCAACTGTTGGGCCTTGTTCTTAGCATAATGAGTATGCCCCAATCTAACCCAAGGGCTCCAACCAGGACAGGTATGAAGAAATTTCCAACCTATGGCAACAACCAGAACCCAATCACGGTACCCCCAGTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites