CircRNA Information

General Information
circRNA Basic Information
CircID chr3:184581648|184582022
Strand +
CircType exon
Host Gene ENSG00000182580.2;
Algorism CIRI2;
Sequence TGCTCTCCGCCTACCTGGGGGGCCAGACCCCTGCCAGGGCTGGGCCCTGTGGAACCCCGGCTTACCCCAGCCTGACCCTGCCAGGACCTCCAGCACTGAAGAACAGACAAGTGTGAGGTTGTGGGGATCCCCTGCTGGAGAGCAGGAAGGTCTGGGCCCTGAGGGGCTTGGGGAGGGGTCATCACCCCCTCTCCTAATCCATCTTCAATATGAAGAGGTTTGGGGCGCACTTCCTGGGGAGGGAACACAGGCCTGGAGAAGTCCCAGCTTGGGCCTTTCCCAAACTTCCAGCTTCTGGGCCACAGCCTAAGGCCAGGCATCCAAAAGTCCAAGAGTCCGAAAGTCCAGCCGGCTGCTTGGCATCCCTGCACGGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:184581648|184582022 hsa-miR-148a-5p 0 0 1
chr3:184581648|184582022 hsa-miR-148a-3p 0 0 1
chr3:184581648|184582022 hsa-miR-214-5p 0 0 1
chr3:184581648|184582022 hsa-miR-214-3p 0 0 1
chr3:184581648|184582022 hsa-miR-152-5p 0 0 1
chr3:184581648|184582022 hsa-miR-152-3p 0 0 1
chr3:184581648|184582022 hsa-miR-370-5p 0 0 1
chr3:184581648|184582022 hsa-miR-370-3p 0 0 1
chr3:184581648|184582022 hsa-miR-148b-5p 0 0 1
chr3:184581648|184582022 hsa-miR-148b-3p 0 0 1
chr3:184581648|184582022 hsa-miR-422a 1 1 1
chr3:184581648|184582022 hsa-miR-484 0 0 1
chr3:184581648|184582022 hsa-miR-432-5p 0 0 1
chr3:184581648|184582022 hsa-miR-432-3p 0 0 1
chr3:184581648|184582022 hsa-miR-555 0 1 1
chr3:184581648|184582022 hsa-miR-632 0 0 1
chr3:184581648|184582022 hsa-miR-661 0 0 1
chr3:184581648|184582022 hsa-miR-766-5p 0 0 1
chr3:184581648|184582022 hsa-miR-766-3p 0 0 1
chr3:184581648|184582022 hsa-miR-1231 0 0 1
chr3:184581648|184582022 hsa-miR-663b 0 0 1
chr3:184581648|184582022 hsa-miR-1287-5p 0 0 1
chr3:184581648|184582022 hsa-miR-1287-3p 0 0 1
chr3:184581648|184582022 hsa-miR-1246 0 0 1
chr3:184581648|184582022 hsa-miR-1266-5p 0 0 1
chr3:184581648|184582022 hsa-miR-1266-3p 0 0 1
chr3:184581648|184582022 hsa-miR-1279 0 0 1
chr3:184581648|184582022 hsa-miR-512-3p 0 0 1
chr3:184581648|184582022 hsa-miR-361-3p 0 1 1
chr3:184581648|184582022 hsa-miR-338-3p 0 0 1
chr3:184581648|184582022 hsa-miR-1207-5p 1 1 1
chr3:184581648|184582022 hsa-miR-342-3p 0 0 1
chr3:184581648|184582022 hsa-miR-515-5p 0 0 1
chr3:184581648|184582022 hsa-miR-642 0 0 1
chr3:184581648|184582022 hsa-miR-220c 0 0 1
chr3:184581648|184582022 hsa-miR-378 0 0 1
chr3:184581648|184582022 hsa-miR-1269 0 0 1
chr3:184581648|184582022 hsa-miR-1254 0 0 1
chr3:184581648|184582022 hsa-miR-637 1 0 0
chr3:184581648|184582022 hsa-miR-663a 1 0 0
chr3:184581648|184582022 hsa-miR-762 1 0 0
chr3:184581648|184582022 hsa-miR-761 0 1 0
chr3:184581648|184582022 hsa-miR-298 0 1 0
chr3:184581648|184582022 hsa-miR-1290 1 1 0
chr3:184581648|184582022 hsa-miR-1538 1 1 0
chr3:184581648|184582022 hsa-miR-2861 1 0 0
chr3:184581648|184582022 hsa-miR-3153 0 1 0
chr3:184581648|184582022 hsa-miR-3176 0 1 0
chr3:184581648|184582022 hsa-miR-378c 1 1 0
chr3:184581648|184582022 hsa-miR-3652 0 1 0
chr3:184581648|184582022 hsa-miR-3918 0 1 0
chr3:184581648|184582022 hsa-miR-378e 1 1 0
chr3:184581648|184582022 hsa-miR-4430 1 0 0
chr3:184581648|184582022 hsa-miR-4498 1 0 0
chr3:184581648|184582022 hsa-miR-4505 1 1 0
chr3:184581648|184582022 hsa-miR-4518 0 1 0
chr3:184581648|184582022 hsa-miR-4525 1 0 0
chr3:184581648|184582022 hsa-miR-378i 1 0 0
chr3:184581648|184582022 hsa-miR-1587 1 0 0
chr3:184581648|184582022 hsa-miR-4651 1 0 0
chr3:184581648|184582022 hsa-miR-4656 1 0 0
chr3:184581648|184582022 hsa-miR-4673 1 0 0
chr3:184581648|184582022 hsa-miR-4706 1 0 0
chr3:184581648|184582022 hsa-miR-4741 1 0 0
chr3:184581648|184582022 hsa-miR-5572 1 0 0
chr3:184581648|184582022 hsa-miR-5787 1 1 0
chr3:184581648|184582022 hsa-miR-6860 1 0 0
chr3:184581648|184582022 hsa-miR-7150 0 1 0
chr3:184581648|184582022 hsa-miR-8058 0 1 0
chr3:184581648|184582022 hsa-miR-8073 0 1 0
chr3:184581648|184582022 hsa-miR-8089 1 0 0
chr3:184581648|184582022 hsa-miR-22-5p 0 1 0
chr3:184581648|184582022 hsa-miR-4747-3p 1 1 0
chr3:184581648|184582022 hsa-miR-125b-1-3p 1 0 0
chr3:184581648|184582022 hsa-miR-6720-5p 1 1 0
chr3:184581648|184582022 hsa-miR-6510-5p 0 1 0
chr3:184581648|184582022 hsa-miR-6089 1 0 0
chr3:184581648|184582022 hsa-miR-6757-5p 0 1 0
chr3:184581648|184582022 hsa-miR-1301-3p 1 0 0
chr3:184581648|184582022 hsa-miR-24-3p 0 1 0
chr3:184581648|184582022 hsa-miR-1178-5p 0 1 0
chr3:184581648|184582022 hsa-miR-7108-5p 0 1 0
chr3:184581648|184582022 hsa-miR-6881-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6735-3p 1 1 0
chr3:184581648|184582022 hsa-miR-3944-3p 1 0 0
chr3:184581648|184582022 hsa-miR-7161-3p 0 1 0
chr3:184581648|184582022 hsa-miR-3667-3p 0 1 0
chr3:184581648|184582022 hsa-miR-4690-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6823-5p 1 0 0
chr3:184581648|184582022 hsa-miR-4713-3p 0 1 0
chr3:184581648|184582022 hsa-miR-642b-5p 1 1 0
chr3:184581648|184582022 hsa-miR-4638-3p 1 0 0
chr3:184581648|184582022 hsa-miR-6769a-3p 1 1 0
chr3:184581648|184582022 hsa-miR-7160-3p 0 1 0
chr3:184581648|184582022 hsa-miR-6811-3p 0 1 0
chr3:184581648|184582022 hsa-miR-4529-3p 1 1 0
chr3:184581648|184582022 hsa-miR-4749-3p 0 1 0
chr3:184581648|184582022 hsa-miR-6846-3p 0 1 0
chr3:184581648|184582022 hsa-miR-5587-3p 0 1 0
chr3:184581648|184582022 hsa-miR-642a-5p 0 1 0
chr3:184581648|184582022 hsa-miR-4763-3p 1 1 0
chr3:184581648|184582022 hsa-miR-6787-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6812-5p 1 1 0
chr3:184581648|184582022 hsa-miR-5001-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6737-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6743-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6752-5p 1 1 0
chr3:184581648|184582022 hsa-miR-6756-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6819-5p 1 0 0
chr3:184581648|184582022 hsa-miR-6842-5p 0 1 0
chr3:184581648|184582022 hsa-miR-6722-3p 1 1 0
chr3:184581648|184582022 hsa-miR-6808-5p 1 0 0
chr3:184581648|184582022 hsa-miR-3620-5p 1 1 0
chr3:184581648|184582022 hsa-miR-6780b-5p 1 1 0
chr3:184581648|184582022 hsa-miR-6836-5p 1 1 0
chr3:184581648|184582022 hsa-miR-10396b-5p 1 0 0
chr3:184581648|184582022 hsa-miR-1909-3p 0 1 0
chr3:184581648|184582022 hsa-miR-4749-5p 1 0 0
chr3:184581648|184582022 hsa-miR-365a-5p 1 1 0
chr3:184581648|184582022 hsa-miR-365b-5p 1 1 0
chr3:184581648|184582022 hsa-miR-6855-5p 1 0 0
chr3:184581648|184582022 hsa-miR-378a-3p 1 1 0
chr3:184581648|184582022 hsa-miR-5009-5p 1 1 0
chr3:184581648|184582022 hsa-miR-10400-3p 1 0 0
chr3:184581648|184582022 hsa-miR-378d 1 1 0
chr3:184581648|184582022 hsa-miR-6733-5p 0 1 0
chr3:184581648|184582022 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:184581648|184582022
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MGRTSWGGNTGLEKSQLGPFPNFQLLGHSLRPGIQKSKSPKVQPAAWHPCTV
Nucleotide Sequence TTGGGGCGCACTTCCTGGGGAGGGAACACAGGCCTGGAGAAGTCCCAGCTTGGGCCTTTCCCAAACTTCCAGCTTCTGGGCCACAGCCTAAGGCCAGGCATCCAAAAGTCCAAGAGTCCGAAAGTCCAGCCGGCTGCTTGGCATCCCTGCACGGTC

CircID chr3:184581648|184582022
ORF Type ORF2
Protein Length 87
Nucleotide Length 264
Protein Sequence MWNPGLPQPDPARTSSTEEQTSVRLWGSPAGEQEGLGPEGLGEGSSPPLLIHLQYEEVWGALPGEGTQAWRSPSLGLSQTSSFWATA
Nucleotide Sequence CTGTGGAACCCCGGCTTACCCCAGCCTGACCCTGCCAGGACCTCCAGCACTGAAGAACAGACAAGTGTGAGGTTGTGGGGATCCCCTGCTGGAGAGCAGGAAGGTCTGGGCCCTGAGGGGCTTGGGGAGGGGTCATCACCCCCTCTCCTAATCCATCTTCAATATGAAGAGGTTTGGGGCGCACTTCCTGGGGAGGGAACACAGGCCTGGAGAAGTCCCAGCTTGGGCCTTTCCCAAACTTCCAGCTTCTGGGCCACAGCCTAA

CircID chr3:184581648|184582022
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MGGQTPARAGPCGTPAYPSLTLPGPPALKNRQV
Nucleotide Sequence CTGGGGGGCCAGACCCCTGCCAGGGCTGGGCCCTGTGGAACCCCGGCTTACCCCAGCCTGACCCTGCCAGGACCTCCAGCACTGAAGAACAGACAAGTGTGA

CircID chr3:184581648|184582022
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MKRFGAHFLGREHRPGEVPAWAFPKLPASGPQPKARHPKVQESESPAGCLASLHG
Nucleotide Sequence ATGAAGAGGTTTGGGGCGCACTTCCTGGGGAGGGAACACAGGCCTGGAGAAGTCCCAGCTTGGGCCTTTCCCAAACTTCCAGCTTCTGGGCCACAGCCTAAGGCCAGGCATCCAAAAGTCCAAGAGTCCGAAAGTCCAGCCGGCTGCTTGGCATCCCTGCACGGT

CircID chr3:184581648|184582022
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MEVWERPKLGLLQACVPSPGSAPQTSSY
Nucleotide Sequence CTGGAAGTTTGGGAAAGGCCCAAGCTGGGACTTCTCCAGGCCTGTGTTCCCTCCCCAGGAAGTGCGCCCCAAACCTCTTCATATTGA

CircID chr3:184581648|184582022
ORF Type ORF6
Protein Length 31
Nucleotide Length 93
Protein Sequence MEVLAGSGWGKPGFHRAQPWQGSGPPGRRRA
Nucleotide Sequence CTGGAGGTCCTGGCAGGGTCAGGCTGGGGTAAGCCGGGGTTCCACAGGGCCCAGCCCTGGCAGGGGTCTGGCCCCCCAGGTAGGCGGAGAGCA

CircID chr3:184581648|184582022
ORF Type ORF7
Protein Length 110
Nucleotide Length 330
Protein Sequence MDFWMPGLRLWPRSWKFGKGPSWDFSRPVFPPQEVRPKPLHIEDGLGEGVMTPPQAPQGPDLPALQQGIPTTSHLSVLQCWRSWQGQAGVSRGSTGPSPGRGLAPQVGGE
Nucleotide Sequence TTGGACTTTTGGATGCCTGGCCTTAGGCTGTGGCCCAGAAGCTGGAAGTTTGGGAAAGGCCCAAGCTGGGACTTCTCCAGGCCTGTGTTCCCTCCCCAGGAAGTGCGCCCCAAACCTCTTCATATTGAAGATGGATTAGGAGAGGGGGTGATGACCCCTCCCCAAGCCCCTCAGGGCCCAGACCTTCCTGCTCTCCAGCAGGGGATCCCCACAACCTCACACTTGTCTGTTCTTCAGTGCTGGAGGTCCTGGCAGGGTCAGGCTGGGGTAAGCCGGGGTTCCACAGGGCCCAGCCCTGGCAGGGGTCTGGCCCCCCAGGTAGGCGGAGAG

CircID chr3:184581648|184582022
ORF Type ORF8
Protein Length 40
Nucleotide Length 123
Protein Sequence MALGCGPEAGSLGKAQAGTSPGLCSLPRKCAPNLFILKMD
Nucleotide Sequence CTGGCCTTAGGCTGTGGCCCAGAAGCTGGAAGTTTGGGAAAGGCCCAAGCTGGGACTTCTCCAGGCCTGTGTTCCCTCCCCAGGAAGTGCGCCCCAAACCTCTTCATATTGAAGATGGATTAG

CircID chr3:184581648|184582022
ORF Type ORF9
Protein Length 27
Nucleotide Length 84
Protein Sequence MLSSRGSPQPHTCLFFSAGGPGRVRLG
Nucleotide Sequence CTGCTCTCCAGCAGGGGATCCCCACAACCTCACACTTGTCTGTTCTTCAGTGCTGGAGGTCCTGGCAGGGTCAGGCTGGGGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites