CircRNA Information

General Information
circRNA Basic Information
CircID chr3:185437156|185437347
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTTACCCTCTGTCTCCCGGCAAAAGATAGAACCTTCCTATGTACCTTGGAACTATAGATCAAATATTCATAAACATTAGTTTGTATCAATTTTTAAATCACTGAAATAAAGCAGAGCAGAAGCCTCCAATATACCTTCCTCCAAATAAAACATATCCTACCACTCCTGCAGTCCTACCTCCTCACCTTAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:185437156|185437347 hsa-let-7b-5p 0 0 1
chr3:185437156|185437347 hsa-let-7b-3p 0 0 1
chr3:185437156|185437347 hsa-let-7c-5p 0 0 1
chr3:185437156|185437347 hsa-let-7c-3p 0 0 1
chr3:185437156|185437347 hsa-let-7d-5p 0 0 1
chr3:185437156|185437347 hsa-let-7d-3p 0 0 1
chr3:185437156|185437347 hsa-let-7e-5p 0 0 1
chr3:185437156|185437347 hsa-let-7e-3p 0 0 1
chr3:185437156|185437347 hsa-miR-18a-5p 0 0 1
chr3:185437156|185437347 hsa-miR-18a-3p 0 0 1
chr3:185437156|185437347 hsa-miR-98-5p 0 0 1
chr3:185437156|185437347 hsa-miR-98-3p 0 0 1
chr3:185437156|185437347 hsa-let-7g-5p 0 0 1
chr3:185437156|185437347 hsa-let-7g-3p 0 0 1
chr3:185437156|185437347 hsa-let-7i-5p 0 0 1
chr3:185437156|185437347 hsa-let-7i-3p 0 0 1
chr3:185437156|185437347 hsa-miR-376c-5p 0 0 1
chr3:185437156|185437347 hsa-miR-376c-3p 0 0 1
chr3:185437156|185437347 hsa-miR-18b-5p 0 0 1
chr3:185437156|185437347 hsa-miR-18b-3p 0 0 1
chr3:185437156|185437347 hsa-miR-555 0 0 1
chr3:185437156|185437347 hsa-miR-650 1 0 1
chr3:185437156|185437347 hsa-miR-765 0 0 1
chr3:185437156|185437347 hsa-miR-190b-5p 0 0 1
chr3:185437156|185437347 hsa-miR-190b-3p 0 0 1
chr3:185437156|185437347 hsa-miR-1205 0 0 1
chr3:185437156|185437347 hsa-miR-1286 0 0 1
chr3:185437156|185437347 hsa-miR-1288-5p 0 0 1
chr3:185437156|185437347 hsa-miR-1288-3p 0 0 1
chr3:185437156|185437347 hsa-miR-767-3p 0 0 1
chr3:185437156|185437347 hsa-miR-409-3p 0 0 1
chr3:185437156|185437347 hsa-miR-509-3-5p 0 1 1
chr3:185437156|185437347 hsa-miR-509-5p 0 1 1
chr3:185437156|185437347 hsa-miR-548c-3p 0 0 1
chr3:185437156|185437347 hsa-let-7a 0 0 1
chr3:185437156|185437347 hsa-let-7f 0 0 1
chr3:185437156|185437347 hsa-miR-768-5p 0 0 1
chr3:185437156|185437347 hsa-miR-1826 0 0 1
chr3:185437156|185437347 hsa-miR-190 0 0 1
chr3:185437156|185437347 hsa-miR-206 1 0 0
chr3:185437156|185437347 hsa-miR-608 1 0 0
chr3:185437156|185437347 hsa-miR-637 1 0 0
chr3:185437156|185437347 hsa-miR-1183 1 1 0
chr3:185437156|185437347 hsa-miR-1268a 1 0 0
chr3:185437156|185437347 hsa-miR-1275 1 0 0
chr3:185437156|185437347 hsa-miR-3125 1 0 0
chr3:185437156|185437347 hsa-miR-4298 1 0 0
chr3:185437156|185437347 hsa-miR-4265 1 0 0
chr3:185437156|185437347 hsa-miR-3652 1 0 0
chr3:185437156|185437347 hsa-miR-3916 1 0 0
chr3:185437156|185437347 hsa-miR-1268b 1 0 0
chr3:185437156|185437347 hsa-miR-4451 1 0 0
chr3:185437156|185437347 hsa-miR-4458 1 1 0
chr3:185437156|185437347 hsa-miR-4476 1 1 0
chr3:185437156|185437347 hsa-miR-3689c 1 0 0
chr3:185437156|185437347 hsa-miR-4489 1 0 0
chr3:185437156|185437347 hsa-miR-4510 1 0 0
chr3:185437156|185437347 hsa-miR-4533 1 0 0
chr3:185437156|185437347 hsa-miR-4648 1 0 0
chr3:185437156|185437347 hsa-miR-4651 1 0 0
chr3:185437156|185437347 hsa-miR-4654 1 0 0
chr3:185437156|185437347 hsa-miR-4689 1 1 0
chr3:185437156|185437347 hsa-miR-4706 1 0 0
chr3:185437156|185437347 hsa-miR-4710 1 1 0
chr3:185437156|185437347 hsa-miR-4734 1 0 0
chr3:185437156|185437347 hsa-miR-4739 1 0 0
chr3:185437156|185437347 hsa-miR-4784 1 0 0
chr3:185437156|185437347 hsa-miR-5194 1 0 0
chr3:185437156|185437347 hsa-miR-6127 1 0 0
chr3:185437156|185437347 hsa-miR-6130 1 0 0
chr3:185437156|185437347 hsa-miR-6132 1 0 0
chr3:185437156|185437347 hsa-miR-6133 1 0 0
chr3:185437156|185437347 hsa-miR-6134 1 0 0
chr3:185437156|185437347 hsa-miR-6165 1 0 0
chr3:185437156|185437347 hsa-miR-8052 1 0 0
chr3:185437156|185437347 hsa-miR-8062 0 1 0
chr3:185437156|185437347 hsa-miR-4433b-3p 1 1 0
chr3:185437156|185437347 hsa-miR-6734-5p 1 0 0
chr3:185437156|185437347 hsa-miR-504-3p 1 0 0
chr3:185437156|185437347 hsa-miR-4433a-3p 1 1 0
chr3:185437156|185437347 hsa-miR-6765-5p 1 0 0
chr3:185437156|185437347 hsa-miR-7106-5p 1 1 0
chr3:185437156|185437347 hsa-miR-6825-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6894-5p 1 0 0
chr3:185437156|185437347 hsa-miR-125a-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6799-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6510-5p 1 0 0
chr3:185437156|185437347 hsa-miR-766-5p 1 1 0
chr3:185437156|185437347 hsa-miR-6880-5p 1 0 0
chr3:185437156|185437347 hsa-miR-7847-3p 1 0 0
chr3:185437156|185437347 hsa-miR-4695-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6746-5p 0 1 0
chr3:185437156|185437347 hsa-miR-4709-3p 1 0 0
chr3:185437156|185437347 hsa-miR-4722-5p 0 1 0
chr3:185437156|185437347 hsa-miR-6890-5p 1 0 0
chr3:185437156|185437347 hsa-miR-3928-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6772-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6829-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6732-5p 1 0 0
chr3:185437156|185437347 hsa-miR-1224-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6881-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6782-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6728-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6786-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6835-5p 1 0 0
chr3:185437156|185437347 hsa-miR-7109-5p 1 0 0
chr3:185437156|185437347 hsa-miR-1229-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6771-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6823-5p 1 0 0
chr3:185437156|185437347 hsa-miR-4743-3p 0 1 0
chr3:185437156|185437347 hsa-miR-4446-3p 1 0 0
chr3:185437156|185437347 hsa-miR-149-3p 1 0 0
chr3:185437156|185437347 hsa-let-7f-5p 0 1 0
chr3:185437156|185437347 hsa-let-7a-5p 0 1 0
chr3:185437156|185437347 hsa-miR-3158-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6828-3p 0 1 0
chr3:185437156|185437347 hsa-miR-1273h-5p 1 0 0
chr3:185437156|185437347 hsa-miR-3689b-3p 1 0 0
chr3:185437156|185437347 hsa-miR-4763-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6778-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6893-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6737-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6754-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6769a-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6819-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6851-5p 1 0 0
chr3:185437156|185437347 hsa-miR-11181-3p 1 0 0
chr3:185437156|185437347 hsa-miR-1249-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6722-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6763-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6797-5p 1 0 0
chr3:185437156|185437347 hsa-miR-7111-5p 1 0 0
chr3:185437156|185437347 hsa-miR-5196-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6780b-5p 1 0 0
chr3:185437156|185437347 hsa-miR-3689a-3p 1 0 0
chr3:185437156|185437347 hsa-miR-4632-5p 1 0 0
chr3:185437156|185437347 hsa-miR-4649-5p 1 0 0
chr3:185437156|185437347 hsa-miR-4725-3p 1 0 0
chr3:185437156|185437347 hsa-miR-675-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6795-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6858-5p 1 1 0
chr3:185437156|185437347 hsa-miR-6883-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6887-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6831-5p 1 0 0
chr3:185437156|185437347 hsa-miR-939-5p 1 0 0
chr3:185437156|185437347 hsa-miR-3199 1 0 0
chr3:185437156|185437347 hsa-miR-4769-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6511b-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6736-5p 1 0 0
chr3:185437156|185437347 hsa-miR-3679-5p 1 0 0
chr3:185437156|185437347 hsa-miR-4747-5p 1 0 0
chr3:185437156|185437347 hsa-miR-6876-5p 1 0 0
chr3:185437156|185437347 hsa-miR-4716-3p 1 0 0
chr3:185437156|185437347 hsa-miR-6805-3p 0 1 0
chr3:185437156|185437347 hsa-miR-4756-5p 1 0 0
chr3:185437156|185437347 hsa-miR-10394-5p 1 0 0
chr3:185437156|185437347 hsa-miR-548ag 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr3:185437156|185437347
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MIQTNVYEYLIYSSKVHRKVLSFAGRQRVR
Nucleotide Sequence TTGATACAAACTAATGTTTATGAATATTTGATCTATAGTTCCAAGGTACATAGGAAGGTTCTATCTTTTGCCGGGAGACAGAGGGTAAGG
CircID chr3:185437156|185437347
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MFYLEEGILEASALLYFSDLKIDTN
Nucleotide Sequence ATGTTTTATTTGGAGGAAGGTATATTGGAGGCTTCTGCTCTGCTTTATTTCAGTGATTTAAAAATTGATACAAACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab