CircRNA Information

General Information
circRNA Basic Information
CircID chr3:186787211|186787828
Strand +
CircType exon
Host Gene ENSG00000156976.13;
Algorism CIRI2;
Sequence ACTTGTTGCACATCAATCCCGCGAGCCAACAAGTCAGTAGTGATCAGAACACGACTTGACCCTGACCGGAATTCCCTCATGATAACATCTCTCTCCTTCTGGTCCATGTCACCATGCTGCAAATTAATAAACCTTAATTCAAGAATCACCAGTCAGGTCGGTATTTAATTTTAATCAACATGTATGAGACCAAGCGTCCCTGGCTGCTACAGGAGAATAGCAGACAGGTATAGTTAAGAAACAACTTTATTTTAAGCAGGGGGAACGACAACACAGCACTTAGCAGCTATATTGTAGTCTGAATCCTGCTTTAGTGGAAATCCAGACATTTTAGAACACCTCTTACCAGAGCAGAAACTGTGAAGTCTCTGGCATGCATCTTCTCAGTCAGCCAGTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:186787211|186787828 hsa-miR-15a-5p 0 0 1
chr3:186787211|186787828 hsa-miR-15a-3p 0 0 1
chr3:186787211|186787828 hsa-miR-19a-5p 0 0 1
chr3:186787211|186787828 hsa-miR-19a-3p 0 0 1
chr3:186787211|186787828 hsa-miR-22-5p 0 0 1
chr3:186787211|186787828 hsa-miR-22-3p 0 0 1
chr3:186787211|186787828 hsa-miR-27a-5p 0 0 1
chr3:186787211|186787828 hsa-miR-27a-3p 0 0 1
chr3:186787211|186787828 hsa-miR-107 1 1 1
chr3:186787211|186787828 hsa-miR-15b-5p 0 0 1
chr3:186787211|186787828 hsa-miR-15b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-27b-5p 0 0 1
chr3:186787211|186787828 hsa-miR-27b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-185-5p 0 0 1
chr3:186787211|186787828 hsa-miR-185-3p 0 0 1
chr3:186787211|186787828 hsa-miR-195-5p 0 0 1
chr3:186787211|186787828 hsa-miR-195-3p 0 0 1
chr3:186787211|186787828 hsa-miR-302a-5p 0 0 1
chr3:186787211|186787828 hsa-miR-302a-3p 0 0 1
chr3:186787211|186787828 hsa-miR-302b-5p 0 0 1
chr3:186787211|186787828 hsa-miR-302b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-302c-5p 0 0 1
chr3:186787211|186787828 hsa-miR-302c-3p 0 0 1
chr3:186787211|186787828 hsa-miR-302d-5p 0 0 1
chr3:186787211|186787828 hsa-miR-302d-3p 0 0 1
chr3:186787211|186787828 hsa-miR-372-5p 0 0 1
chr3:186787211|186787828 hsa-miR-372-3p 0 0 1
chr3:186787211|186787828 hsa-miR-373-5p 0 0 1
chr3:186787211|186787828 hsa-miR-373-3p 0 0 1
chr3:186787211|186787828 hsa-miR-382-5p 0 0 1
chr3:186787211|186787828 hsa-miR-382-3p 0 0 1
chr3:186787211|186787828 hsa-miR-346 0 0 1
chr3:186787211|186787828 hsa-miR-424-5p 0 0 1
chr3:186787211|186787828 hsa-miR-424-3p 0 0 1
chr3:186787211|186787828 hsa-miR-497-5p 0 0 1
chr3:186787211|186787828 hsa-miR-497-3p 0 0 1
chr3:186787211|186787828 hsa-miR-520e-5p 0 0 1
chr3:186787211|186787828 hsa-miR-520e-3p 0 0 1
chr3:186787211|186787828 hsa-miR-526b-5p 0 0 1
chr3:186787211|186787828 hsa-miR-526b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-520b-5p 0 0 1
chr3:186787211|186787828 hsa-miR-520b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-503-5p 0 0 1
chr3:186787211|186787828 hsa-miR-503-3p 0 0 1
chr3:186787211|186787828 hsa-miR-561-5p 0 0 1
chr3:186787211|186787828 hsa-miR-561-3p 0 0 1
chr3:186787211|186787828 hsa-miR-632 0 1 1
chr3:186787211|186787828 hsa-miR-646 0 0 1
chr3:186787211|186787828 hsa-miR-1301-5p 0 0 1
chr3:186787211|186787828 hsa-miR-1301-3p 0 0 1
chr3:186787211|186787828 hsa-miR-892b 0 0 1
chr3:186787211|186787828 hsa-miR-1231 0 0 1
chr3:186787211|186787828 hsa-miR-1290 0 0 1
chr3:186787211|186787828 hsa-miR-1253 0 0 1
chr3:186787211|186787828 hsa-miR-302e 0 0 1
chr3:186787211|186787828 hsa-miR-1288-5p 0 0 1
chr3:186787211|186787828 hsa-miR-1288-3p 0 0 1
chr3:186787211|186787828 hsa-miR-486-5p 0 0 1
chr3:186787211|186787828 hsa-miR-512-3p 0 0 1
chr3:186787211|186787828 hsa-miR-142-5p 0 0 1
chr3:186787211|186787828 hsa-miR-875-5p 0 0 1
chr3:186787211|186787828 hsa-miR-654-3p 0 0 1
chr3:186787211|186787828 hsa-miR-767-3p 0 0 1
chr3:186787211|186787828 hsa-miR-513a-5p 0 0 1
chr3:186787211|186787828 hsa-miR-338-5p 0 1 1
chr3:186787211|186787828 hsa-miR-34c-3p 0 0 1
chr3:186787211|186787828 hsa-miR-485-3p 0 0 1
chr3:186787211|186787828 hsa-miR-520d-3p 0 0 1
chr3:186787211|186787828 hsa-miR-519b-3p 0 0 1
chr3:186787211|186787828 hsa-miR-519c-3p 0 0 1
chr3:186787211|186787828 hsa-miR-876-5p 0 0 1
chr3:186787211|186787828 hsa-miR-520a-3p 0 0 1
chr3:186787211|186787828 hsa-miR-520c-3p 0 0 1
chr3:186787211|186787828 hsa-miR-128 0 0 1
chr3:186787211|186787828 hsa-miR-103 0 0 1
chr3:186787211|186787828 hsa-miR-16 0 0 1
chr3:186787211|186787828 hsa-miR-1269 0 0 1
chr3:186787211|186787828 hsa-miR-1300 0 0 1
chr3:186787211|186787828 hsa-miR-19b 0 0 1
chr3:186787211|186787828 hsa-miR-544 0 0 1
chr3:186787211|186787828 hsa-miR-519a 0 0 1
chr3:186787211|186787828 hsa-miR-298 0 1 0
chr3:186787211|186787828 hsa-miR-3132 1 0 0
chr3:186787211|186787828 hsa-miR-3137 0 1 0
chr3:186787211|186787828 hsa-miR-3154 1 0 0
chr3:186787211|186787828 hsa-miR-3175 1 0 0
chr3:186787211|186787828 hsa-miR-4298 1 0 0
chr3:186787211|186787828 hsa-miR-4440 1 0 0
chr3:186787211|186787828 hsa-miR-4468 1 0 0
chr3:186787211|186787828 hsa-miR-4490 0 1 0
chr3:186787211|186787828 hsa-miR-4510 1 0 0
chr3:186787211|186787828 hsa-miR-4516 1 0 0
chr3:186787211|186787828 hsa-miR-4535 1 0 0
chr3:186787211|186787828 hsa-miR-4644 0 1 0
chr3:186787211|186787828 hsa-miR-4689 1 0 0
chr3:186787211|186787828 hsa-miR-4788 1 0 0
chr3:186787211|186787828 hsa-miR-5087 1 1 0
chr3:186787211|186787828 hsa-miR-5192 1 0 0
chr3:186787211|186787828 hsa-miR-5706 0 1 0
chr3:186787211|186787828 hsa-miR-5739 1 0 0
chr3:186787211|186787828 hsa-miR-6090 1 0 0
chr3:186787211|186787828 hsa-miR-6127 1 0 0
chr3:186787211|186787828 hsa-miR-6129 1 0 0
chr3:186787211|186787828 hsa-miR-6133 1 0 0
chr3:186787211|186787828 hsa-miR-6165 1 0 0
chr3:186787211|186787828 hsa-miR-6863 1 0 0
chr3:186787211|186787828 hsa-miR-8085 1 0 0
chr3:186787211|186787828 hsa-miR-12127 1 0 0
chr3:186787211|186787828 hsa-miR-6510-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6728-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4653-3p 1 0 0
chr3:186787211|186787828 hsa-miR-3064-5p 0 1 0
chr3:186787211|186787828 hsa-miR-6730-5p 1 0 0
chr3:186787211|186787828 hsa-miR-200b-5p 1 0 0
chr3:186787211|186787828 hsa-miR-197-5p 1 0 0
chr3:186787211|186787828 hsa-miR-7845-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6793-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6821-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6810-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4640-5p 1 0 0
chr3:186787211|186787828 hsa-miR-7113-3p 1 0 0
chr3:186787211|186787828 hsa-miR-103a-3p 1 1 0
chr3:186787211|186787828 hsa-miR-4446-3p 1 0 0
chr3:186787211|186787828 hsa-miR-6824-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4800-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4776-5p 1 1 0
chr3:186787211|186787828 hsa-miR-3120-5p 0 1 0
chr3:186787211|186787828 hsa-miR-6832-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4762-3p 0 1 0
chr3:186787211|186787828 hsa-miR-1306-3p 1 0 0
chr3:186787211|186787828 hsa-miR-4639-5p 0 1 0
chr3:186787211|186787828 hsa-miR-1207-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6865-5p 1 0 0
chr3:186787211|186787828 hsa-miR-1343-5p 1 0 0
chr3:186787211|186787828 hsa-miR-11181-3p 1 0 0
chr3:186787211|186787828 hsa-miR-1249-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6797-5p 1 0 0
chr3:186787211|186787828 hsa-miR-3620-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4726-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6858-5p 1 1 0
chr3:186787211|186787828 hsa-miR-6845-5p 1 0 0
chr3:186787211|186787828 hsa-miR-4769-5p 1 0 0
chr3:186787211|186787828 hsa-miR-3085-5p 1 0 0
chr3:186787211|186787828 hsa-miR-30c-1-3p 1 0 0
chr3:186787211|186787828 hsa-miR-6731-5p 1 0 0
chr3:186787211|186787828 hsa-miR-6891-5p 1 1 0
chr3:186787211|186787828 hsa-miR-6724-5p 1 0 0
chr3:186787211|186787828 hsa-miR-3085-3p 1 0 0
chr3:186787211|186787828 hsa-miR-6876-3p 0 1 0
chr3:186787211|186787828 hsa-miR-3144-3p 0 1 0
chr3:186787211|186787828 hsa-miR-3136-5p 0 1 0
chr3:186787211|186787828 hsa-miR-5699-3p 0 1 0
chr3:186787211|186787828 hsa-miR-4524a-5p 0 1 0
chr3:186787211|186787828 hsa-miR-374b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:186787211|186787828
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MITSLSFWSMSPCCKLINLNSRITSQVGI
Nucleotide Sequence ATGATAACATCTCTCTCCTTCTGGTCCATGTCACCATGCTGCAAATTAATAAACCTTAATTCAAGAATCACCAGTCAGGTCGGTATTTAA
CircID chr3:186787211|186787828
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MTEKMHARDFTVSALVRGVLKCLDFH
Nucleotide Sequence CTGACTGAGAAGATGCATGCCAGAGACTTCACAGTTTCTGCTCTGGTAAGAGGTGTTCTAAAATGTCTGGATTTCCACTAA
CircID chr3:186787211|186787828
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MLSAVLSFPLLKIKLFLNYTCLLFSCSSQGRLVSYMLIKIKYRPDW
Nucleotide Sequence CTGCTAAGTGCTGTGTTGTCGTTCCCCCTGCTTAAAATAAAGTTGTTTCTTAACTATACCTGTCTGCTATTCTCCTGTAGCAGCCAGGGACGCTTGGTCTCATACATGTTGATTAAAATTAAATACCGACCTGACTGGTGA
CircID chr3:186787211|186787828
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MSGFPLKQDSDYNIAAKCCVVVPPA
Nucleotide Sequence ATGTCTGGATTTCCACTAAAGCAGGATTCAGACTACAATATAGCTGCTAAGTGCTGTGTTGTCGTTCCCCCTGCTTAA
CircID chr3:186787211|186787828
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MVILELRFINLQHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQ
Nucleotide Sequence CTGGTGATTCTTGAATTAAGGTTTATTAATTTGCAGCATGGTGACATGGACCAGAAGGAGAGAGATGTTATCATGAGGGAATTCCGGTCAGGGTCAAGTCGTGTTCTGATCACTACTGACTTGTTGGCTCGCGGGATTGATGTGCAACAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab