CircRNA Information

General Information
circRNA Basic Information
CircID chr3:194136649|194137008
Strand +
CircType exon
Host Gene ENSG00000114315.3;
Algorism CIRI2;
Sequence TGTCATTTCCAGAATGTCCGCCTTCTCCAGCTTGGAATGCCGCGAGCTCTGCATAGAGTAGGCAAGAAAGGAAAGTGAGCCCCGTGTCAGCTGCTTCAGAGTGCTGGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTCTGGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTGGGAGAACGCAGTACCAGCGAGTGCCAGACCCCGCAGGGCGGGGGGTTTCACTCTTAGTAGCTGAGAAAGTGTTTGTTTTTTAATTAAAAGAGCGAGCAGCATTTCCCCACTTACATCTTTCTTCAGAGCATCCAAAATCAGTGTTTTCAGCTGGCTCAGACTTTCATTTATTCTTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:194136649|194137008 hsa-miR-198 0 0 1
chr3:194136649|194137008 hsa-miR-141-5p 0 0 1
chr3:194136649|194137008 hsa-miR-141-3p 0 0 1
chr3:194136649|194137008 hsa-miR-150-5p 0 0 1
chr3:194136649|194137008 hsa-miR-150-3p 0 0 1
chr3:194136649|194137008 hsa-miR-155-5p 0 0 1
chr3:194136649|194137008 hsa-miR-155-3p 0 0 1
chr3:194136649|194137008 hsa-miR-200a-5p 0 0 1
chr3:194136649|194137008 hsa-miR-200a-3p 0 0 1
chr3:194136649|194137008 hsa-miR-495-5p 0 0 1
chr3:194136649|194137008 hsa-miR-495-3p 0 0 1
chr3:194136649|194137008 hsa-miR-570-5p 0 0 1
chr3:194136649|194137008 hsa-miR-570-3p 0 0 1
chr3:194136649|194137008 hsa-miR-578 0 0 1
chr3:194136649|194137008 hsa-miR-602 1 0 1
chr3:194136649|194137008 hsa-miR-639 0 0 1
chr3:194136649|194137008 hsa-miR-646 0 1 1
chr3:194136649|194137008 hsa-miR-765 0 0 1
chr3:194136649|194137008 hsa-miR-744-5p 0 0 1
chr3:194136649|194137008 hsa-miR-744-3p 0 0 1
chr3:194136649|194137008 hsa-miR-1204 0 0 1
chr3:194136649|194137008 hsa-miR-1299 0 0 1
chr3:194136649|194137008 hsa-miR-491-5p 0 0 1
chr3:194136649|194137008 hsa-miR-532-3p 0 0 1
chr3:194136649|194137008 hsa-miR-615-5p 1 1 1
chr3:194136649|194137008 hsa-miR-525-5p 0 1 1
chr3:194136649|194137008 hsa-miR-361-3p 0 0 1
chr3:194136649|194137008 hsa-miR-875-3p 1 1 1
chr3:194136649|194137008 hsa-miR-520a-5p 0 0 1
chr3:194136649|194137008 hsa-miR-516b 0 0 1
chr3:194136649|194137008 hsa-miR-720 0 0 1
chr3:194136649|194137008 hsa-miR-638 1 0 0
chr3:194136649|194137008 hsa-miR-663a 1 0 0
chr3:194136649|194137008 hsa-miR-1202 1 0 0
chr3:194136649|194137008 hsa-miR-1293 1 0 0
chr3:194136649|194137008 hsa-miR-1538 0 1 0
chr3:194136649|194137008 hsa-miR-2110 0 1 0
chr3:194136649|194137008 hsa-miR-2861 1 0 0
chr3:194136649|194137008 hsa-miR-3147 1 0 0
chr3:194136649|194137008 hsa-miR-3185 1 0 0
chr3:194136649|194137008 hsa-miR-3646 0 1 0
chr3:194136649|194137008 hsa-miR-3907 1 0 0
chr3:194136649|194137008 hsa-miR-4430 1 0 0
chr3:194136649|194137008 hsa-miR-4462 1 1 0
chr3:194136649|194137008 hsa-miR-4465 1 0 0
chr3:194136649|194137008 hsa-miR-4531 1 1 0
chr3:194136649|194137008 hsa-miR-4673 1 0 0
chr3:194136649|194137008 hsa-miR-4706 1 0 0
chr3:194136649|194137008 hsa-miR-5093 0 1 0
chr3:194136649|194137008 hsa-miR-5572 1 0 0
chr3:194136649|194137008 hsa-miR-5703 0 1 0
chr3:194136649|194137008 hsa-miR-5787 1 1 0
chr3:194136649|194137008 hsa-miR-8089 1 0 0
chr3:194136649|194137008 hsa-miR-12119 1 0 0
chr3:194136649|194137008 hsa-miR-29a-5p 0 1 0
chr3:194136649|194137008 hsa-miR-92a-2-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4731-5p 0 1 0
chr3:194136649|194137008 hsa-miR-7155-5p 0 1 0
chr3:194136649|194137008 hsa-miR-3194-3p 1 0 0
chr3:194136649|194137008 hsa-miR-6765-5p 1 0 0
chr3:194136649|194137008 hsa-miR-7106-5p 1 1 0
chr3:194136649|194137008 hsa-miR-3622a-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6089 1 0 0
chr3:194136649|194137008 hsa-miR-6807-5p 1 1 0
chr3:194136649|194137008 hsa-miR-6746-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6730-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6820-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6741-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6776-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6787-3p 0 1 0
chr3:194136649|194137008 hsa-miR-7108-5p 0 1 0
chr3:194136649|194137008 hsa-miR-6796-5p 1 0 0
chr3:194136649|194137008 hsa-miR-185-3p 1 0 0
chr3:194136649|194137008 hsa-miR-6770-5p 0 1 0
chr3:194136649|194137008 hsa-miR-6821-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6786-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4640-5p 1 0 0
chr3:194136649|194137008 hsa-miR-3127-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6771-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4756-3p 0 1 0
chr3:194136649|194137008 hsa-miR-149-3p 0 1 0
chr3:194136649|194137008 hsa-miR-7160-3p 0 1 0
chr3:194136649|194137008 hsa-miR-3678-3p 0 1 0
chr3:194136649|194137008 hsa-miR-6859-3p 0 1 0
chr3:194136649|194137008 hsa-miR-514a-5p 0 1 0
chr3:194136649|194137008 hsa-miR-10400-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4763-3p 1 0 0
chr3:194136649|194137008 hsa-miR-6812-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6775-5p 1 0 0
chr3:194136649|194137008 hsa-miR-11181-3p 0 1 0
chr3:194136649|194137008 hsa-miR-6722-3p 1 0 0
chr3:194136649|194137008 hsa-miR-6779-5p 0 1 0
chr3:194136649|194137008 hsa-miR-6875-5p 0 1 0
chr3:194136649|194137008 hsa-miR-4728-5p 0 1 0
chr3:194136649|194137008 hsa-miR-5196-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6780b-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6836-5p 1 0 0
chr3:194136649|194137008 hsa-miR-10396a-5p 1 0 0
chr3:194136649|194137008 hsa-miR-10396b-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4685-5p 1 0 0
chr3:194136649|194137008 hsa-miR-4725-3p 1 0 0
chr3:194136649|194137008 hsa-miR-4726-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6794-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6848-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6883-5p 0 1 0
chr3:194136649|194137008 hsa-miR-6887-5p 1 0 0
chr3:194136649|194137008 hsa-miR-939-5p 1 0 0
chr3:194136649|194137008 hsa-miR-6799-3p 0 1 0
chr3:194136649|194137008 hsa-miR-1914-3p 1 0 0
chr3:194136649|194137008 hsa-miR-7151-3p 1 0 0
chr3:194136649|194137008 hsa-miR-6785-5p 0 1 0
chr3:194136649|194137008 hsa-miR-320a-3p 1 0 0
chr3:194136649|194137008 hsa-miR-4774-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr3:194136649|194137008
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MLQSAGGPSSRPRSASIISGPQRIRPGPPAWENAVPASARPRRAGGFTLSS
Nucleotide Sequence CTGCTTCAGAGTGCTGGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTCTGGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTGGGAGAACGCAGTACCAGCGAGTGCCAGACCCCGCAGGGCGGGGGGTTTCACTCTTAGTAGCTGA
CircID chr3:194136649|194137008
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MGSRDNACAPWPGGGTPSTLKQLTRGSLSFLAYSMQSSRHSKLEKADILEMT
Nucleotide Sequence CTGGGGTCCAGAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTCTTGCCTACTCTATGCAGAGCTCGCGGCATTCCAAGCTGGAGAAGGCGGACATTCTGGAAATGACA
CircID chr3:194136649|194137008
ORF Type ORF3
Protein Length 81
Nucleotide Length 246
Protein Sequence MSQLKTLILDALKKDVSGEMLLALLIKKQTLSQLLRVKPPALRGLALAGTAFSQAGGPGLIRWGPEIMLALRGREEGPPAL
Nucleotide Sequence CTGAGCCAGCTGAAAACACTGATTTTGGATGCTCTGAAGAAAGATGTAAGTGGGGAAATGCTGCTCGCTCTTTTAATTAAAAAACAAACACTTTCTCAGCTACTAAGAGTGAAACCCCCCGCCCTGCGGGGTCTGGCACTCGCTGGTACTGCGTTCTCCCAGGCGGGAGGGCCCGGCCTTATTCGCTGGGGTCCAGAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGA
CircID chr3:194136649|194137008
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MRSVAGRRDPQHSEAADTGLTFLSCLLYAELAAFQAGEGGHSGND
Nucleotide Sequence TTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTCTTGCCTACTCTATGCAGAGCTCGCGGCATTCCAAGCTGGAGAAGGCGGACATTCTGGAAATGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab