CircRNA Information

General Information
circRNA Basic Information
CircID chr3:194357225|194357357
Strand +
CircType exon
Host Gene ENSG00000172061.8;
Algorism CIRI2;
Sequence CACCTGTGCTTTGGAAATCCACCACCAATCCCGATCGGCTCTTATTAGCTCCCCGCTCCACAAGACACCTGTGATCTGGAAATCTACCACCAATCCCGATCGGCTCTTATTAGCTCCCCGCTCCACAAGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:194357225|194357357 hsa-miR-379-5p 0 0 1
chr3:194357225|194357357 hsa-miR-379-3p 0 0 1
chr3:194357225|194357357 hsa-miR-431-5p 0 0 1
chr3:194357225|194357357 hsa-miR-431-3p 0 0 1
chr3:194357225|194357357 hsa-miR-552-5p 0 0 1
chr3:194357225|194357357 hsa-miR-552-3p 0 0 1
chr3:194357225|194357357 hsa-miR-581 0 0 1
chr3:194357225|194357357 hsa-miR-610 0 0 1
chr3:194357225|194357357 hsa-miR-920 0 1 1
chr3:194357225|194357357 hsa-miR-939-5p 0 0 1
chr3:194357225|194357357 hsa-miR-939-3p 0 0 1
chr3:194357225|194357357 hsa-miR-1290 0 0 1
chr3:194357225|194357357 hsa-miR-525-5p 0 0 1
chr3:194357225|194357357 hsa-miR-330-3p 0 0 1
chr3:194357225|194357357 hsa-miR-509-3p 0 0 1
chr3:194357225|194357357 hsa-miR-876-3p 0 0 1
chr3:194357225|194357357 hsa-miR-513a-5p 0 0 1
chr3:194357225|194357357 hsa-miR-520a-5p 0 0 1
chr3:194357225|194357357 hsa-miR-876-5p 0 0 1
chr3:194357225|194357357 hsa-miR-323-5p 0 0 1
chr3:194357225|194357357 hsa-miR-220c 0 0 1
chr3:194357225|194357357 hsa-miR-663a 1 0 0
chr3:194357225|194357357 hsa-miR-762 1 0 0
chr3:194357225|194357357 hsa-miR-1246 1 0 0
chr3:194357225|194357357 hsa-miR-3167 0 1 0
chr3:194357225|194357357 hsa-miR-3665 1 0 0
chr3:194357225|194357357 hsa-miR-4488 1 0 0
chr3:194357225|194357357 hsa-miR-4706 1 1 0
chr3:194357225|194357357 hsa-miR-12115 1 1 0
chr3:194357225|194357357 hsa-miR-187-3p 1 1 0
chr3:194357225|194357357 hsa-miR-4433b-3p 1 0 0
chr3:194357225|194357357 hsa-miR-323a-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6765-5p 1 0 0
chr3:194357225|194357357 hsa-miR-125a-3p 1 0 0
chr3:194357225|194357357 hsa-miR-8071 1 0 0
chr3:194357225|194357357 hsa-miR-7114-5p 1 1 0
chr3:194357225|194357357 hsa-miR-6880-5p 1 0 0
chr3:194357225|194357357 hsa-miR-7847-3p 1 0 0
chr3:194357225|194357357 hsa-miR-4653-3p 0 1 0
chr3:194357225|194357357 hsa-miR-3151-5p 1 0 0
chr3:194357225|194357357 hsa-miR-3180-3p 1 0 0
chr3:194357225|194357357 hsa-miR-6793-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6796-5p 1 1 0
chr3:194357225|194357357 hsa-miR-1908-5p 1 0 0
chr3:194357225|194357357 hsa-miR-4732-5p 0 1 0
chr3:194357225|194357357 hsa-miR-6886-5p 1 0 0
chr3:194357225|194357357 hsa-miR-664b-5p 1 1 0
chr3:194357225|194357357 hsa-miR-628-3p 0 1 0
chr3:194357225|194357357 hsa-miR-6769b-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6787-5p 1 0 0
chr3:194357225|194357357 hsa-miR-1343-5p 1 1 0
chr3:194357225|194357357 hsa-miR-6726-5p 0 1 0
chr3:194357225|194357357 hsa-miR-6803-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6842-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6851-5p 1 0 0
chr3:194357225|194357357 hsa-miR-6722-3p 1 0 0
chr3:194357225|194357357 hsa-miR-10396a-5p 1 0 0
chr3:194357225|194357357 hsa-miR-10396b-5p 1 0 0
chr3:194357225|194357357 hsa-miR-1237-5p 1 0 0
chr3:194357225|194357357 hsa-miR-328-5p 1 1 0
chr3:194357225|194357357 hsa-miR-4749-5p 0 1 0
chr3:194357225|194357357 hsa-miR-6777-5p 1 1 0
chr3:194357225|194357357 hsa-miR-6846-5p 1 1 0
chr3:194357225|194357357 hsa-miR-6848-5p 1 1 0
chr3:194357225|194357357 hsa-miR-6889-5p 1 1 0
chr3:194357225|194357357 hsa-miR-4723-5p 1 1 0
chr3:194357225|194357357 hsa-miR-4758-5p 1 0 0
chr3:194357225|194357357 hsa-miR-5591-5p 0 1 0
chr3:194357225|194357357 hsa-miR-4781-5p 0 1 0
chr3:194357225|194357357 hsa-miR-376a-2-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr3:194357225|194357357
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MEIHHQSRSALISSPLHKTPVIWKSTTNPDRLLLAPRSTRH
Nucleotide Sequence TTGGAAATCCACCACCAATCCCGATCGGCTCTTATTAGCTCCCCGCTCCACAAGACACCTGTGATCTGGAAATCTACCACCAATCCCGATCGGCTCTTATTAGCTCCCCGCTCCACAAGACAC

CircID chr3:194357225|194357357
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MVVDFQITGVLWSGELIRADRDWWWISKAQV
Nucleotide Sequence TTGGTGGTAGATTTCCAGATCACAGGTGTCTTGTGGAGCGGGGAGCTAATAAGAGCCGATCGGGATTGGTGGTGGATTTCCAAAGCACAGGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites