CircNet

General Information

circRNA Basic Information

CircID	chr3:194427075\|194454392
Strand	-
CircType	exon
Host Gene	ENSG00000133657.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTCTCAACCCATTTTACATTTTCCAGCTGTTCAGTGTTATACTGTGGAGCACTGATGAATACTATTACTATGCTCTAGCTATTGTGGTTATGTCCATAGTATCAATCGTAAGCTCACTATATTCCATTAGAAAGCAATATGTTATGTTGCATGACATGGTGGCAACTCATAGTACCGTAAGAGTTTCAGTTTGTAGAGTAAATGAAGAAATAGAAGAAATCTTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTCATTCCATTAAATGGGACAATAATGCCTTGTGATGCTGTGCTTATTAATGGTACCTGCATTGTAAACGAAAGCATGTTAACAGTGAGTTTAAATCCTGCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCGGGTCTTATATCTGGGGCCCTTCTCTTCTCCGTTTTGTCTCAGATTATCATCTGCATTGGATTTCAATCTTTGGGTTTTTTTTGGGTCAAACAGCAACCTTGGTATGAAGTGTGGCATCCAAAATCAGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:194427075\|194454392
ORF Type	ORF1
Protein Length	142
Nucleotide Length	426
Protein Sequence	MSIVSIVSSLYSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMVIPLNGTIMPCDAVLINGTCIVNESMLTVSLNPAWKELVAQRPPSGLISGALLFSVLSQIIICIGFQSLGFFWVKQQPWYEVWHPKS
Nucleotide Sequence	ATGTCCATAGTATCAATCGTAAGCTCACTATATTCCATTAGAAAGCAATATGTTATGTTGCATGACATGGTGGCAACTCATAGTACCGTAAGAGTTTCAGTTTGTAGAGTAAATGAAGAAATAGAAGAAATCTTTTCTACCGACCTTGTGCCAGGAGATGTCATGGTCATTCCATTAAATGGGACAATAATGCCTTGTGATGCTGTGCTTATTAATGGTACCTGCATTGTAAACGAAAGCATGTTAACAGTGAGTTTAAATCCTGCCTGGAAAGAACTTGTGGCACAAAGACCACCTTCGGGTCTTATATCTGGGGCCCTTCTCTTCTCCGTTTTGTCTCAGATTATCATCTGCATTGGATTTCAATCTTTGGGTTTTTTTTGGGTCAAACAGCAACCTTGGTATGAAGTGTGGCATCCAAAATCA

CircID	chr3:194427075\|194454392
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MLSFTMQVPLISTASQGIIVPFNGMTMTSPGTRSVEKISSISSFTLQTETLTVL*
Nucleotide Sequence	ATGCTTTCGTTTACAATGCAGGTACCATTAATAAGCACAGCATCACAAGGCATTATTGTCCCATTTAATGGAATGACCATGACATCTCCTGGCACAAGGTCGGTAGAAAAGATTTCTTCTATTTCTTCATTTACTCTACAAACTGAAACTCTTACGGTACTATGA

CircID	chr3:194427075\|194454392
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	MPHFIPRLLFDPKKTQRLKSNADDNLRQNGEEKGPRYKTRRWSLCHKFFPGRI*
Nucleotide Sequence	ATGCCACACTTCATACCAAGGTTGCTGTTTGACCCAAAAAAAACCCAAAGATTGAAATCCAATGCAGATGATAATCTGAGACAAAACGGAGAAGAGAAGGGCCCCAGATATAAGACCCGAAGGTGGTCTTTGTGCCACAAGTTCTTTCCAGGCAGGATTTAA

CircID	chr3:194427075\|194454392
ORF Type	ORF4
Protein Length	30
Nucleotide Length	90
Protein Sequence	MSCNITYCFLMEYSELTIDTMDITTIARA*
Nucleotide Sequence	ATGTCATGCAACATAACATATTGCTTTCTAATGGAATATAGTGAGCTTACGATTGATACTATGGACATAACCACAATAGCTAGAGCATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:194427075\|194454392	SLBP	0	0	1
chr3:194427075\|194454392	ELAVL1	1	1	2
chr3:194427075\|194454392	SF3B4	1	0	0
chr3:194427075\|194454392	PRPF8	0	3	3
chr3:194427075\|194454392	UPF1	0	0	1
chr3:194427075\|194454392	FMR1	0	0	5
chr3:194427075\|194454392	CPSF6	0	0	1
chr3:194427075\|194454392	TROVE2	0	1	0
chr3:194427075\|194454392	FUS	0	0	1
chr3:194427075\|194454392	GNL3	0	0	1
chr3:194427075\|194454392	SRSF1	0	3	6
chr3:194427075\|194454392	NOP58	0	1	2
chr3:194427075\|194454392	U2AF1	0	0	10
chr3:194427075\|194454392	U2AF2	14	5	17
chr3:194427075\|194454392	SRSF9	0	0	2
chr3:194427075\|194454392	DDX54	0	0	12
chr3:194427075\|194454392	SF3A3	0	0	1
chr3:194427075\|194454392	PTBP1	0	0	2
chr3:194427075\|194454392	HNRNPC	5	0	0
chr3:194427075\|194454392	TRA2A	0	0	1
chr3:194427075\|194454392	HNRNPA1	1	2	0
chr3:194427075\|194454392	DDX3X	0	0	3
chr3:194427075\|194454392	SMNDC1	0	0	5
chr3:194427075\|194454392	MSI2	0	0	2
chr3:194427075\|194454392	ACIN1	0	0	11
chr3:194427075\|194454392	LIN28B	0	3	1
chr3:194427075\|194454392	LIN28A	0	0	2
chr3:194427075\|194454392	RANGAP1	0	0	1
chr3:194427075\|194454392	FXR1	1	0	2
chr3:194427075\|194454392	FXR2	0	0	3
chr3:194427075\|194454392	SND1	0	1	2
chr3:194427075\|194454392	IGF2BP1	0	0	17
chr3:194427075\|194454392	IGF2BP3	0	0	10
chr3:194427075\|194454392	IGF2BP2	2	2	12
chr3:194427075\|194454392	BUD13	0	0	3
chr3:194427075\|194454392	RBM47	1	2	4
chr3:194427075\|194454392	EIF4G2	0	0	1
chr3:194427075\|194454392	CSTF2T	0	0	3
chr3:194427075\|194454392	DKC1	0	1	0
chr3:194427075\|194454392	AGO2	0	0	3
chr3:194427075\|194454392	EIF4A3	1	3	7
chr3:194427075\|194454392	FBL	0	2	1

CircRNA Information