CircNet

General Information

circRNA Basic Information

CircID	chr3:19533805\|19533956
Strand	+
CircType	exon
Host Gene	ENSG00000183960.7;
Algorism	CIRI2;
Sequence	TCACAGTTCCCTGACTGAAGCTGCCCTCCTCTGATCTGCTTGGGAGAACTAGGTGCAAAGATGTTTCCGAAGAGGAGCAGACAGAAGATGAGAGAGTTGCTGAAATGGACTGCAGAGGCGTCAACGTAGAATCTGAATGTGGAGAGATGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:19533805\|19533956	hsa-miR-181c-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-181c-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-150-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-150-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-383-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-383-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-346	0	0	1
chr3:19533805\|19533956	hsa-miR-494-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-494-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-181d-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-181d-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-507	0	0	1
chr3:19533805\|19533956	hsa-miR-545-5p	0	0	1
chr3:19533805\|19533956	hsa-miR-545-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-557	0	0	1
chr3:19533805\|19533956	hsa-miR-632	0	1	1
chr3:19533805\|19533956	hsa-miR-1205	0	0	1
chr3:19533805\|19533956	hsa-miR-532-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-1184	0	0	1
chr3:19533805\|19533956	hsa-miR-767-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-455-3p	0	0	1
chr3:19533805\|19533956	hsa-miR-181a	0	0	1
chr3:19533805\|19533956	hsa-miR-181b	0	0	1
chr3:19533805\|19533956	hsa-miR-7110-3p	1	0	0
chr3:19533805\|19533956	hsa-miR-486-3p	1	1	0
chr3:19533805\|19533956	hsa-miR-4743-3p	0	1	0
chr3:19533805\|19533956	hsa-miR-3616-3p	0	1	0
chr3:19533805\|19533956	hsa-miR-3120-5p	0	1	0
chr3:19533805\|19533956	hsa-miR-629-3p	0	1	0
chr3:19533805\|19533956	hsa-miR-1288-5p	0	1	0
chr3:19533805\|19533956	hsa-miR-328-5p	1	0	0
chr3:19533805\|19533956	hsa-miR-4632-5p	1	1	0
chr3:19533805\|19533956	hsa-miR-6735-5p	1	0	0
chr3:19533805\|19533956	hsa-miR-6858-5p	1	0	0
chr3:19533805\|19533956	hsa-miR-939-5p	1	0	0
chr3:19533805\|19533956	hsa-miR-6792-3p	1	0	0
chr3:19533805\|19533956	hsa-miR-6781-3p	1	0	0
chr3:19533805\|19533956	hsa-miR-5699-3p	0	1	0
chr3:19533805\|19533956	hsa-miR-147b-5p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:19533805\|19533956
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	MICLGELGAKMFPKRSRQKMRELLKWTAEAST
Nucleotide Sequence	CTGATCTGCTTGGGAGAACTAGGTGCAAAGATGTTTCCGAAGAGGAGCAGACAGAAGATGAGAGAGTTGCTGAAATGGACTGCAGAGGCGTCAACGTAG

CircID	chr3:19533805\|19533956
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MKLPSSDLLGRTRCKDVSEEEQTEDERVAEMDCRGVNVESECGEMH
Nucleotide Sequence	CTGAAGCTGCCCTCCTCTGATCTGCTTGGGAGAACTAGGTGCAAAGATGTTTCCGAAGAGGAGCAGACAGAAGATGAGAGAGTTGCTGAAATGGACTGCAGAGGCGTCAACGTAGAATCTGAATGTGGAGAGATGCAC

CircID	chr3:19533805\|19533956
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MLLFGNIFAPSSPKQIRGGQLQSGNC
Nucleotide Sequence	CTGCTCCTCTTCGGAAACATCTTTGCACCTAGTTCTCCCAAGCAGATCAGAGGAGGGCAGCTTCAGTCAGGGAACTGT

CircID	chr3:19533805\|19533956
ORF Type	ORF4
Protein Length	41
Nucleotide Length	123
Protein Sequence	MTPLQSISATLSSSVCSSSETSLHLVLPSRSEEGSFSQGTV
Nucleotide Sequence	TTGACGCCTCTGCAGTCCATTTCAGCAACTCTCTCATCTTCTGTCTGCTCCTCTTCGGAAACATCTTTGCACCTAGTTCTCCCAAGCAGATCAGAGGAGGGCAGCTTCAGTCAGGGAACTGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information