CircNet

General Information

circRNA Basic Information

CircID	chr3:196270415\|196283538
Strand	-
CircType	exon
Host Gene	ENSG00000161217.11;
Algorism	find_circ;CIRI2;CIRC
Sequence	CATGTGCCGAAGCGCCACCTCAGAAGATAAAAAGAAATGAGTCTCATATTTGGCATTCTTTTAGTTAAAAGAAGATGGATGCACAGTGTTCAGCCAAGGTCAATGCAAGGAAGAGGAGAAAAGAGGCGCCCGGACCCAACGGGGCAACAGAAGAAGATGGGGTTCCTTCCAAAGTGCAGCGCTGTGCAGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:196270415\|196283538	hsa-miR-3197	1	1	1
chr3:196270415\|196283538	hsa-miR-3974	1	1	1
chr3:196270415\|196283538	hsa-miR-3157-5p	1	1	1
chr3:196270415\|196283538	hsa-miR-4691-3p	1	1	1
chr3:196270415\|196283538	hsa-miR-6830-5p	1	1	1
chr3:196270415\|196283538	hsa-miR-566	1	1	1
chr3:196270415\|196283538	hsa-miR-4761-5p	1	1	1
chr3:196270415\|196283538	hsa-miR-6789-3p	1	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:196270415\|196283538
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	MSLIFGILLVKRRWMHSVQPRSMQGRGEKRRPDPTGQQKKMGFLPKCSAVQ
Nucleotide Sequence	ATGAGTCTCATATTTGGCATTCTTTTAGTTAAAAGAAGATGGATGCACAGTGTTCAGCCAAGGTCAATGCAAGGAAGAGGAGAAAAGAGGCGCCCGGACCCAACGGGGCAACAGAAGAAGATGGGGTTCCTTCCAAAGTGCAGCGCTGTGCAG

CircID	chr3:196270415\|196283538
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MDAQCSAKVNARKRRKEAPGPNGATEEDGVPSKVQRCAV
Nucleotide Sequence	ATGGATGCACAGTGTTCAGCCAAGGTCAATGCAAGGAAGAGGAGAAAAGAGGCGCCCGGACCCAACGGGGCAACAGAAGAAGATGGGGTTCCTTCCAAAGTGCAGCGCTGTGCAGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:196270415\|196283538	KHSRP	2	0	0
chr3:196270415\|196283538	FUS	1	0	0
chr3:196270415\|196283538	CELF2	0	1	0
chr3:196270415\|196283538	PRPF8	0	2	0
chr3:196270415\|196283538	TNRC6A	0	1	0
chr3:196270415\|196283538	FMR1	0	2	2
chr3:196270415\|196283538	CPSF6	0	1	2
chr3:196270415\|196283538	TROVE2	0	1	0
chr3:196270415\|196283538	SRSF7	0	0	1
chr3:196270415\|196283538	SRSF1	0	4	4
chr3:196270415\|196283538	NOP58	0	0	2
chr3:196270415\|196283538	NONO	2	0	0
chr3:196270415\|196283538	U2AF2	7	1	2
chr3:196270415\|196283538	SRSF9	0	2	1
chr3:196270415\|196283538	NOP56	0	1	0
chr3:196270415\|196283538	DDX54	0	0	5
chr3:196270415\|196283538	PCBP2	0	2	0
chr3:196270415\|196283538	HNRNPA2B1	0	0	1
chr3:196270415\|196283538	PTBP1	1	4	0
chr3:196270415\|196283538	TRA2A	0	3	3
chr3:196270415\|196283538	DDX3X	0	2	1
chr3:196270415\|196283538	SMNDC1	0	2	0
chr3:196270415\|196283538	ACIN1	0	0	1
chr3:196270415\|196283538	RANGAP1	0	1	0
chr3:196270415\|196283538	BCCIP	0	0	1
chr3:196270415\|196283538	SND1	0	0	1
chr3:196270415\|196283538	GTF2F1	0	1	0
chr3:196270415\|196283538	IGF2BP2	0	3	2
chr3:196270415\|196283538	BUD13	0	2	2
chr3:196270415\|196283538	RBFOX2	0	0	1
chr3:196270415\|196283538	RBM47	2	0	0
chr3:196270415\|196283538	EIF4G2	0	0	1
chr3:196270415\|196283538	CSTF2T	0	1	1
chr3:196270415\|196283538	YWHAG	0	1	0
chr3:196270415\|196283538	AIFM1	0	1	1
chr3:196270415\|196283538	EIF4A3	1	1	2
chr3:196270415\|196283538	AGO2	0	3	1

CircRNA Information