CircNet

General Information

circRNA Basic Information

CircID	chr3:197695866\|197705175
Strand	-
CircType	exon
Host Gene	ENSG00000145016.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCGTGCCGCCGCCAGACGGATTACTGGCAGTTCGTGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAGAAGTTCATCAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCAGTGAACGTGCTGTTGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCTCGGGGATAGACAGTATATCAGAAAATTCTACACAGATGCTGCCTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr3:197695866\|197705175	hsa-miR-17-3p	1	1
chr3:197695866\|197705175	hsa-miR-149-5p	1	1
chr3:197695866\|197705175	hsa-miR-24-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:197695866\|197705175
ORF Type	ORF1
Protein Length	106
Nucleotide Length	318
Protein Sequence	VKDIRWLSPHSALHVEKFISVHENDQSSADGASERAVAELWLQHSLQYHCLSAQLRPLLGDRQYIRKFYTDAAFLLSDAHVTAMLQCLEAVEQNNPRLLAQIDASM
Nucleotide Sequence	GTGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAGAAGTTCATCAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCAGTGAACGTGCTGTTGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCTCGGGGATAGACAGTATATCAGAAAATTCTACACAGATGCTGCCTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCATG

CircID	chr3:197695866\|197705175
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MVPVNVLLPSCGCSTACSTTASQPSSGPCSGIDSISENSTQMLPSC*
Nucleotide Sequence	ATGGTGCCAGTGAACGTGCTGTTGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCTCGGGGATAGACAGTATATCAGAAAATTCTACACAGATGCTGCCTTCCTGCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:197695866\|197705175	ZNF184	0	0	1
chr3:197695866\|197705175	HNRNPC	5	2	0
chr3:197695866\|197705175	DDX3X	0	0	1
chr3:197695866\|197705175	ELAVL1	0	0	1
chr3:197695866\|197705175	DHX9	1	0	0
chr3:197695866\|197705175	SMNDC1	2	1	2
chr3:197695866\|197705175	SF3B4	1	0	0
chr3:197695866\|197705175	U2AF2	3	1	0
chr3:197695866\|197705175	U2AF1	1	0	1
chr3:197695866\|197705175	FXR2	0	0	1
chr3:197695866\|197705175	RBM22	0	0	1
chr3:197695866\|197705175	BUD13	1	1	2
chr3:197695866\|197705175	FMR1	1	0	0
chr3:197695866\|197705175	SRSF1	0	0	2
chr3:197695866\|197705175	IGF2BP3	0	0	2
chr3:197695866\|197705175	IGF2BP2	1	0	1
chr3:197695866\|197705175	AGO2	0	1	0
chr3:197695866\|197705175	EIF4A3	0	1	5
chr3:197695866\|197705175	FUS	1	0	0

CircRNA Information