CircNet

General Information

circRNA Basic Information

CircID	chr3:197814908\|197866219
Strand	+
CircType	exon
Host Gene	ENSG00000186001.12;
Algorism	find_circ;CIRI2;CIRC
Sequence	ACCTGTCGCGAAATCGCCTTTCAGAAATTCCTATAGAAGCATGTCACTTTGTTTCTCTGGAAAATCTCAACTTGTACCAAAATTGTATTCGTTATATTCCAGAGGCAATTTTAAACCTACAAGCTCTAACATTCTTAAATATTAGCAAAAAGCATCACAAAGTCCACAAAAACAGCACCCGCTCCTAGATGGCGTAGATGGTGAGTGCCCCTTCCCATCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTGCATGAGTGATGACAGACCTAATGCTCTATTAAGTTCACCTGCAACAGAAACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr3:197814908\|197866219	hsa-miR-150-3p	1	1
chr3:197814908\|197866219	hsa-miR-215-3p	1	1
chr3:197814908\|197866219	hsa-miR-125a-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:197814908\|197866219
ORF Type	ORF1
Protein Length	35
Nucleotide Length	105
Protein Sequence	MSLCFSGKSQLVPKLYSLYSRGNFKPTSSNILKY*
Nucleotide Sequence	ATGTCACTTTGTTTCTCTGGAAAATCTCAACTTGTACCAAAATTGTATTCGTTATATTCCAGAGGCAATTTTAAACCTACAAGCTCTAACATTCTTAAATATTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:197814908\|197866219	U2AF2	6	14	6
chr3:197814908\|197866219	ELAVL1	3	0	0
chr3:197814908\|197866219	PRPF8	0	2	3
chr3:197814908\|197866219	TAF15	0	1	0
chr3:197814908\|197866219	FMR1	0	2	0
chr3:197814908\|197866219	FUS	0	1	0
chr3:197814908\|197866219	SRSF7	0	0	1
chr3:197814908\|197866219	NOP58	1	1	3
chr3:197814908\|197866219	U2AF1	0	1	4
chr3:197814908\|197866219	NOP56	2	3	0
chr3:197814908\|197866219	DDX54	0	0	2
chr3:197814908\|197866219	RBM10	0	1	0
chr3:197814908\|197866219	SF3A3	1	0	0
chr3:197814908\|197866219	PTBP1	0	1	1
chr3:197814908\|197866219	HNRNPC	0	1	0
chr3:197814908\|197866219	TRA2A	0	1	0
chr3:197814908\|197866219	KHSRP	0	2	0
chr3:197814908\|197866219	DDX3X	0	0	1
chr3:197814908\|197866219	SMNDC1	0	1	2
chr3:197814908\|197866219	RANGAP1	1	0	0
chr3:197814908\|197866219	LIN28B	0	0	1
chr3:197814908\|197866219	IGF2BP1	0	2	0
chr3:197814908\|197866219	IGF2BP3	0	0	2
chr3:197814908\|197866219	IGF2BP2	0	3	1
chr3:197814908\|197866219	MBNL2	1	0	0
chr3:197814908\|197866219	BUD13	0	0	3
chr3:197814908\|197866219	RBFOX2	1	0	0
chr3:197814908\|197866219	SLTM	0	2	0
chr3:197814908\|197866219	CSTF2T	0	1	0
chr3:197814908\|197866219	TIA1	0	1	0
chr3:197814908\|197866219	RNF219	1	0	0
chr3:197814908\|197866219	XRN2	0	0	3
chr3:197814908\|197866219	FBL	0	2	1
chr3:197814908\|197866219	EIF4A3	1	0	7
chr3:197814908\|197866219	AGO2	0	0	1

CircRNA Information