CircNet

General Information

circRNA Basic Information

CircID	chr3:23959671\|23965162
Strand	+
CircType	exon
Host Gene	ENSG00000174738.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGTTTCTTTCGGAGAAGTATTCAACAAAACATCCAGTACAAGAAGTGCCTGAAGAATGAAAACTGTTCTATAATGAGAATGAATAGGAACAGATGTCAGCAATGTCGCTTCAAAAAGTGTCTGTCTGTTGGAATGTCAAGAGATGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGGTTCAGAGATCTCTCTCAGCATGACCAGGTCAACCTTTTAAAGGCTGGGACTTTTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:23959671\|23965162	hsa-miR-127-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:23959671\|23965162
ORF Type	ORF1
Protein Length	63
Nucleotide Length	189
Protein Sequence	MVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAGTFE
Nucleotide Sequence	ATGGTTTGTCCAATGAGTAAGTCTCCATATGTGGATCCTCATAAATCAGGACATGAAATCTGGGAAGAATTTTCGATGAGCTTCACTCCAGCAGTGAAAGAAGTGGTGGAATTTGCAAAGCGTATTCCTGGGTTCAGAGATCTCTCTCAGCATGACCAGGTCAACCTTTTAAAGGCTGGGACTTTTGAG

CircID	chr3:23959671\|23965162
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MLREISEPRNTLCKFHHFFHCWSEAHRKFFPDFMS*
Nucleotide Sequence	ATGCTGAGAGAGATCTCTGAACCCAGGAATACGCTTTGCAAATTCCACCACTTCTTTCACTGCTGGAGTGAAGCTCATCGAAAATTCTTCCCAGATTTCATGTCCTGA

CircID	chr3:23959671\|23965162
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRMNRNRCQQCRFKKCLSVGMSRDGLSNE*
Nucleotide Sequence	ATGAGAATGAATAGGAACAGATGTCAGCAATGTCGCTTCAAAAAGTGTCTGTCTGTTGGAATGTCAAGAGATGGTTTGTCCAATGAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:23959671\|23965162	NOP56	1	2	0
chr3:23959671\|23965162	MOV10	0	1	1
chr3:23959671\|23965162	ELAVL1	2	7	3
chr3:23959671\|23965162	DHX9	2	0	0
chr3:23959671\|23965162	SF3B4	1	0	0
chr3:23959671\|23965162	RC3H1	0	0	2
chr3:23959671\|23965162	PRPF8	1	2	0
chr3:23959671\|23965162	TAF15	1	0	0
chr3:23959671\|23965162	FMR1	0	1	6
chr3:23959671\|23965162	FUS	1	0	0
chr3:23959671\|23965162	SRSF1	1	0	1
chr3:23959671\|23965162	NOP58	0	0	1
chr3:23959671\|23965162	U2AF1	1	0	1
chr3:23959671\|23965162	U2AF2	6	3	3
chr3:23959671\|23965162	SRSF9	0	0	1
chr3:23959671\|23965162	DDX54	0	1	9
chr3:23959671\|23965162	RBM10	1	0	0
chr3:23959671\|23965162	HNRNPM	0	1	0
chr3:23959671\|23965162	FIP1L1	1	0	0
chr3:23959671\|23965162	PTBP1	6	0	0
chr3:23959671\|23965162	HNRNPC	4	3	0
chr3:23959671\|23965162	TRA2A	0	0	1
chr3:23959671\|23965162	ZNF184	0	0	2
chr3:23959671\|23965162	ZC3H7B	0	0	1
chr3:23959671\|23965162	IGF2BP1	0	1	0
chr3:23959671\|23965162	IGF2BP2	1	0	3
chr3:23959671\|23965162	TARDBP	1	0	0
chr3:23959671\|23965162	BUD13	1	0	2
chr3:23959671\|23965162	RBFOX2	1	0	0
chr3:23959671\|23965162	RBM47	0	0	1
chr3:23959671\|23965162	CSTF2T	1	0	2
chr3:23959671\|23965162	FBL	0	0	1
chr3:23959671\|23965162	EWSR1	0	1	0
chr3:23959671\|23965162	EIF4A3	3	2	3
chr3:23959671\|23965162	AGO2	0	0	1

CircRNA Information