CircNet

General Information

circRNA Basic Information

CircID	chr3:25624297\|25626864
Strand	-
CircType	exon
Host Gene	ENSG00000077097.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCATTTAGTAAGAAGAAGATTGATGACAGAAAAGAATGGTTAACAAATTTTATGGAAGACCGGAGACAGCGTAGGCTACATGGCTTACCAGAGCAATTTTTATATGGTACTGCAACAAAGCATTTGACTTATAATGATTTCATCAACAAGGAATTGATTCTCTTCTCAAACTCAGACAATGAAAGATCTATACCATCTCTTGTTGATGTTTTGGAGTAGATGGAGATGGCATAAAAACATCTTAGTATATACCTGCAGATGGCTTTCTAGGAAAAAACAAACAAACAAAACAAACGTGTTAGTATGTACTCACTTTGTTACAGAATCTCAAGTAACAATTTTACTGGTGTTCTTGAAAAGCAAATTGTATCTTTGCTTTATTCCCCTGAATTGTTACAACTATATCTTGAAGTAACATTTTAAAAGAGCTCTTTTAAAAATAGGCTTTAAACCTGGCCAGCGGAAAGTTTTATTTACCTGTTTCAAGAGGAATGATAAACGTGAAGTAAAAGTTGCCCAGTTGGCTGGCTCTGTTGCTGAGATGTCGGCTTATCATCATGGAGAACAAGCATTGATGATGACTATTGTGAATTTGGCTCAGAACTTTGTGGGAAGTAACAACATTAACTTGCTTCAGCCTATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATTTTCACAATGTTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr3:25624297\|25626864	hsa-miR-7-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:25624297\|25626864
ORF Type	ORF1
Protein Length	79
Nucleotide Length	237
Protein Sequence	MKDLYHLLLMFWSRWRWHKNILVYTCRWLSRKKQTNKTNVLVCTHFVTESQVTILLVFLKSKLYLCFIPLNCYNYILK*
Nucleotide Sequence	ATGAAAGATCTATACCATCTCTTGTTGATGTTTTGGAGTAGATGGAGATGGCATAAAAACATCTTAGTATATACCTGCAGATGGCTTTCTAGGAAAAAACAAACAAACAAAACAAACGTGTTAGTATGTACTCACTTTGTTACAGAATCTCAAGTAACAATTTTACTGGTGTTCTTGAAAAGCAAATTGTATCTTTGCTTTATTCCCCTGAATTGTTACAACTATATCTTGAAGTAA

CircID	chr3:25624297\|25626864
ORF Type	ORF2
Protein Length	66
Nucleotide Length	198
Protein Sequence	MKPSSKLTNRLKQVNVVTSHKVLSQIHNSHHQCLFSMMISRHLSNRASQLGNFYFTFIIPLETGK*
Nucleotide Sequence	ATGAAGCCGAGTTCCAAACTGACCAATAGGCTGAAGCAAGTTAATGTTGTTACTTCCCACAAAGTTCTGAGCCAAATTCACAATAGTCATCATCAATGCTTGTTCTCCATGATGATAAGCCGACATCTCAGCAACAGAGCCAGCCAACTGGGCAACTTTTACTTCACGTTTATCATTCCTCTTGAAACAGGTAAATAA

CircID	chr3:25624297\|25626864
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	MSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTML
Nucleotide Sequence	ATGTCGGCTTATCATCATGGAGAACAAGCATTGATGATGACTATTGTGAATTTGGCTCAGAACTTTGTGGGAAGTAACAACATTAACTTGCTTCAGCCTATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATTTTCACAATGTTA

CircID	chr3:25624297\|25626864
ORF Type	ORF4
Protein Length	56
Nucleotide Length	168
Protein Sequence	MEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDVLE*
Nucleotide Sequence	ATGGAAGACCGGAGACAGCGTAGGCTACATGGCTTACCAGAGCAATTTTTATATGGTACTGCAACAAAGCATTTGACTTATAATGATTTCATCAACAAGGAATTGATTCTCTTCTCAAACTCAGACAATGAAAGATCTATACCATCTCTTGTTGATGTTTTGGAGTAG

CircID	chr3:25624297\|25626864
ORF Type	ORF5
Protein Length	40
Nucleotide Length	120
Protein Sequence	MYSLCYRISSNNFTGVLEKQIVSLLYSPELLQLYLEVTF*
Nucleotide Sequence	ATGTACTCACTTTGTTACAGAATCTCAAGTAACAATTTTACTGGTGTTCTTGAAAAGCAAATTGTATCTTTGCTTTATTCCCCTGAATTGTTACAACTATATCTTGAAGTAACATTTTAA

CircID	chr3:25624297\|25626864
ORF Type	ORF6
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLVLHDDKPTSQQQSQPTGQLLLHVYHSS*
Nucleotide Sequence	ATGCTTGTTCTCCATGATGATAAGCCGACATCTCAGCAACAGAGCCAGCCAACTGGGCAACTTTTACTTCACGTTTATCATTCCTCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:25624297\|25626864	NOP56	1	1	0
chr3:25624297\|25626864	MOV10	1	3	0
chr3:25624297\|25626864	ELAVL1	4	6	2
chr3:25624297\|25626864	NCBP2	0	1	0
chr3:25624297\|25626864	ELAVL3	2	1	0
chr3:25624297\|25626864	SF3B4	0	1	0
chr3:25624297\|25626864	FAM120A	0	4	2
chr3:25624297\|25626864	TBRG4	0	1	0
chr3:25624297\|25626864	CELF2	0	2	0
chr3:25624297\|25626864	YTHDF2	0	1	0
chr3:25624297\|25626864	YTHDF1	0	2	0
chr3:25624297\|25626864	RPS3	0	1	0
chr3:25624297\|25626864	TAF15	0	5	0
chr3:25624297\|25626864	FMR1	3	19	9
chr3:25624297\|25626864	CPSF6	0	0	2
chr3:25624297\|25626864	GEMIN5	0	3	0
chr3:25624297\|25626864	CNBP	0	2	0
chr3:25624297\|25626864	RBM15B	0	3	0
chr3:25624297\|25626864	TROVE2	0	1	0
chr3:25624297\|25626864	FUS	1	1	0
chr3:25624297\|25626864	DGCR8	0	2	2
chr3:25624297\|25626864	SRSF7	0	0	1
chr3:25624297\|25626864	DROSHA	0	1	0
chr3:25624297\|25626864	SRSF1	0	4	2
chr3:25624297\|25626864	NOP58	0	0	3
chr3:25624297\|25626864	PRPF8	0	1	0
chr3:25624297\|25626864	U2AF1	1	2	0
chr3:25624297\|25626864	ADAR	1	0	0
chr3:25624297\|25626864	U2AF2	23	14	4
chr3:25624297\|25626864	SRSF9	0	0	1
chr3:25624297\|25626864	DDX54	6	4	21
chr3:25624297\|25626864	TNRC6A	0	3	0
chr3:25624297\|25626864	RBM10	6	3	0
chr3:25624297\|25626864	PCBP2	2	1	0
chr3:25624297\|25626864	FIP1L1	0	1	0
chr3:25624297\|25626864	PTBP1	2	2	1
chr3:25624297\|25626864	HNRNPC	0	1	0
chr3:25624297\|25626864	TRA2A	0	1	2
chr3:25624297\|25626864	ZNF184	0	0	2
chr3:25624297\|25626864	DDX3X	0	13	0
chr3:25624297\|25626864	TIAL1	1	1	0
chr3:25624297\|25626864	UPF1	0	2	0
chr3:25624297\|25626864	ZRANB2	0	1	0
chr3:25624297\|25626864	MSI2	0	2	1
chr3:25624297\|25626864	ACIN1	6	2	4
chr3:25624297\|25626864	LIN28B	1	8	4
chr3:25624297\|25626864	LIN28A	1	1	0
chr3:25624297\|25626864	RANGAP1	0	1	1
chr3:25624297\|25626864	FXR1	1	7	6
chr3:25624297\|25626864	FXR2	0	11	2
chr3:25624297\|25626864	SND1	0	0	1
chr3:25624297\|25626864	IGF2BP1	0	4	1
chr3:25624297\|25626864	IGF2BP3	1	4	2
chr3:25624297\|25626864	IGF2BP2	1	8	11
chr3:25624297\|25626864	NPM1	0	3	0
chr3:25624297\|25626864	TARDBP	1	10	0
chr3:25624297\|25626864	YTHDC1	0	4	0
chr3:25624297\|25626864	RBFOX2	0	1	0
chr3:25624297\|25626864	RBM47	0	1	1
chr3:25624297\|25626864	SLTM	0	1	1
chr3:25624297\|25626864	EIF4G2	0	1	2
chr3:25624297\|25626864	DDX42	0	1	1
chr3:25624297\|25626864	CSTF2T	2	1	4
chr3:25624297\|25626864	SRRM4	0	1	0
chr3:25624297\|25626864	TIA1	1	0	0
chr3:25624297\|25626864	RBM22	2	0	0
chr3:25624297\|25626864	XRN2	0	1	1
chr3:25624297\|25626864	DKC1	1	0	0
chr3:25624297\|25626864	HNRNPK	1	0	0
chr3:25624297\|25626864	AGO2	2	8	4
chr3:25624297\|25626864	EIF4A3	4	2	7
chr3:25624297\|25626864	FBL	1	3	4

CircRNA Information