CircNet

General Information

circRNA Basic Information

CircID	chr3:29739720\|29884208
Strand	+
CircType	exon
Host Gene	ENSG00000144642.21;
Algorism	find_circ;CIRI2;DCC;
Sequence	CAACAAGAGCAAGACCCAACAAACCTATACATCTCAAATCTCCCCATTTCTATGGATGAGCAGGAGCTTGAGAATATGCTGAAACCCTTTGGACATGTCATTTCCACAAGAATACTAAGAGACGCTAATGGAGTCAGCAGAGGTGTTGGCTTTGCCAGAATGGAGTCTACTGAAAAATGTGAAGTGGTAATTCAACATTTTAATGGAAAATATCTGAAAACACCACCAGGCATCCCAGGCTGGCATGGCTTTGACCTATGACCCCACAGCTGCCATACAGAATGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr3:29739720\|29884208
ORF Type	ORF1
Protein Length	70
Nucleotide Length	210
Protein Sequence	MDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPGWHGFDL*
Nucleotide Sequence	ATGGATGAGCAGGAGCTTGAGAATATGCTGAAACCCTTTGGACATGTCATTTCCACAAGAATACTAAGAGACGCTAATGGAGTCAGCAGAGGTGTTGGCTTTGCCAGAATGGAGTCTACTGAAAAATGTGAAGTGGTAATTCAACATTTTAATGGAAAATATCTGAAAACACCACCAGGCATCCCAGGCTGGCATGGCTTTGACCTATGA

CircID	chr3:29739720\|29884208
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MPAWDAWWCFQIFSIKMLNYHFTFFSRLHSGKANTSADSISVS*
Nucleotide Sequence	ATGCCAGCCTGGGATGCCTGGTGGTGTTTTCAGATATTTTCCATTAAAATGTTGAATTACCACTTCACATTTTTCAGTAGACTCCATTCTGGCAAAGCCAACACCTCTGCTGACTCCATTAGCGTCTCTTAG

CircID	chr3:29739720\|29884208
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MTCPKGFSIFSSSCSSIEMGRFEMYRFVGSCSC
Nucleotide Sequence	ATGACATGTCCAAAGGGTTTCAGCATATTCTCAAGCTCCTGCTCATCCATAGAAATGGGGAGATTTGAGATGTATAGGTTTGTTGGGTCTTGCTCTTGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr3:29739720\|29884208	FBL	0	3	0
chr3:29739720\|29884208	NOP58	0	1	2
chr3:29739720\|29884208	SRSF3	0	1	0
chr3:29739720\|29884208	ADAR	1	0	0
chr3:29739720\|29884208	CSTF2	1	0	0
chr3:29739720\|29884208	FUS	0	2	0
chr3:29739720\|29884208	TARDBP	1	0	0
chr3:29739720\|29884208	TAF15	1	1	0
chr3:29739720\|29884208	IGF2BP2	1	1	1
chr3:29739720\|29884208	EIF4A3	1	1	3
chr3:29739720\|29884208	AGO2	0	0	1

CircRNA Information