CircRNA Information

General Information
circRNA Basic Information
CircID chr3:31683634|31683869
Strand -
CircType exon
Host Gene ENSG00000144645.12;
Algorism CIRI2;
Sequence CTTCCCCTATCATAGAGACCCCCACGGACATGCCCATGAACTTGCTTTTGGTCCATACATGAGTGTTGACGCACAGTCTCTTCTCCTCGCACTCACAGTAGAAGCAGGAGATGGGTGGGTGATGGGACACTTGCTCAGCCACAAACCTTAGTTTGTAGCTTTTGGAAGGGTCATCGGCCATTGGGTGTTCGTGACAGCTGGCAGGAGAGCGGGAAGCAGTCCTCTTAGGCTTGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr3:31683634|31683869 hsa-miR-210-5p 0 0 1
chr3:31683634|31683869 hsa-miR-210-3p 0 0 1
chr3:31683634|31683869 hsa-miR-370-5p 0 0 1
chr3:31683634|31683869 hsa-miR-370-3p 0 0 1
chr3:31683634|31683869 hsa-miR-504-5p 0 0 1
chr3:31683634|31683869 hsa-miR-504-3p 0 0 1
chr3:31683634|31683869 hsa-miR-505-5p 0 0 1
chr3:31683634|31683869 hsa-miR-505-3p 0 0 1
chr3:31683634|31683869 hsa-miR-892a 0 0 1
chr3:31683634|31683869 hsa-miR-1202 0 1 1
chr3:31683634|31683869 hsa-miR-1206 0 0 1
chr3:31683634|31683869 hsa-miR-1253 0 0 1
chr3:31683634|31683869 hsa-miR-1288-5p 0 0 1
chr3:31683634|31683869 hsa-miR-1288-3p 0 0 1
chr3:31683634|31683869 hsa-miR-1283 0 0 1
chr3:31683634|31683869 hsa-miR-516a-3p 0 0 1
chr3:31683634|31683869 hsa-miR-151-5p 0 0 1
chr3:31683634|31683869 hsa-miR-1308 0 0 1
chr3:31683634|31683869 hsa-miR-572 1 0 0
chr3:31683634|31683869 hsa-miR-765 1 0 0
chr3:31683634|31683869 hsa-miR-1183 1 0 0
chr3:31683634|31683869 hsa-miR-1268a 1 0 0
chr3:31683634|31683869 hsa-miR-1976 0 1 0
chr3:31683634|31683869 hsa-miR-3169 1 0 0
chr3:31683634|31683869 hsa-miR-4304 1 0 0
chr3:31683634|31683869 hsa-miR-4253 1 1 0
chr3:31683634|31683869 hsa-miR-3657 0 1 0
chr3:31683634|31683869 hsa-miR-1268b 1 1 0
chr3:31683634|31683869 hsa-miR-4516 0 1 0
chr3:31683634|31683869 hsa-miR-4706 1 0 0
chr3:31683634|31683869 hsa-miR-4784 1 0 0
chr3:31683634|31683869 hsa-miR-5087 0 1 0
chr3:31683634|31683869 hsa-miR-6090 1 0 0
chr3:31683634|31683869 hsa-miR-6762-3p 1 1 0
chr3:31683634|31683869 hsa-miR-4474-3p 0 1 0
chr3:31683634|31683869 hsa-miR-6759-5p 1 1 0
chr3:31683634|31683869 hsa-miR-6845-3p 0 1 0
chr3:31683634|31683869 hsa-miR-6871-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6748-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6882-3p 1 0 0
chr3:31683634|31683869 hsa-miR-6884-3p 1 1 0
chr3:31683634|31683869 hsa-miR-7108-3p 0 1 0
chr3:31683634|31683869 hsa-miR-1229-5p 1 0 0
chr3:31683634|31683869 hsa-miR-193b-5p 1 0 0
chr3:31683634|31683869 hsa-miR-4776-5p 1 1 0
chr3:31683634|31683869 hsa-miR-1225-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6743-3p 1 1 0
chr3:31683634|31683869 hsa-miR-6513-3p 0 1 0
chr3:31683634|31683869 hsa-miR-7151-5p 0 1 0
chr3:31683634|31683869 hsa-miR-5197-3p 0 1 0
chr3:31683634|31683869 hsa-miR-4433b-5p 1 1 0
chr3:31683634|31683869 hsa-miR-6769b-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6778-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6752-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6803-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6842-5p 1 0 0
chr3:31683634|31683869 hsa-miR-7110-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6774-5p 1 0 0
chr3:31683634|31683869 hsa-miR-6862-5p 1 1 0
chr3:31683634|31683869 hsa-miR-6858-5p 1 0 0
chr3:31683634|31683869 hsa-miR-4758-5p 1 0 0
chr3:31683634|31683869 hsa-miR-498-5p 1 0 0
chr3:31683634|31683869 hsa-miR-4722-3p 0 1 0
chr3:31683634|31683869 hsa-miR-7114-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr3:31683634|31683869
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MSVDAQSLLLALTVEAGDGWVMGHLLSHKP
Nucleotide Sequence ATGAGTGTTGACGCACAGTCTCTTCTCCTCGCACTCACAGTAGAAGCAGGAGATGGGTGGGTGATGGGACACTTGCTCAGCCACAAACCTTAG

CircID chr3:31683634|31683869
ORF Type ORF2
Protein Length 60
Nucleotide Length 180
Protein Sequence MADDPSKSYKLRFVAEQVSHHPPISCFYCECEEKRLCVNTHVWTKSKFMGMSVGVSMIGE
Nucleotide Sequence ATGGCCGATGACCCTTCCAAAAGCTACAAACTAAGGTTTGTGGCTGAGCAAGTGTCCCATCACCCACCCATCTCCTGCTTCTACTGTGAGTGCGAGGAGAAGAGACTGTGCGTCAACACTCATGTATGGACCAAAAGCAAGTTCATGGGCATGTCCGTGGGGGTCTCTATGATAGGGGAA

CircID chr3:31683634|31683869
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MWLSKCPITHPSPASTVSARRRDCASTLMYGPKASSWACPWGSL
Nucleotide Sequence TTGTGGCTGAGCAAGTGTCCCATCACCCACCCATCTCCTGCTTCTACTGTGAGTGCGAGGAGAAGAGACTGTGCGTCAACACTCATGTATGGACCAAAAGCAAGTTCATGGGCATGTCCGTGGGGGTCTCTATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites